Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.39
SSBP3Q9BWW4 ST7-213ENST00000432298 1956 ntTSL 2 BASIC6.4□□□□□ -1.39
SSBP3Q9BWW4 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC6.4□□□□□ -1.39
SSBP3Q9BWW4 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC6.4□□□□□ -1.39
SSBP3Q9BWW4 FBXO36-202ENST00000373652 3120 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
SSBP3Q9BWW4 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
SSBP3Q9BWW4 ZADH2-202ENST00000537114 3205 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
SSBP3Q9BWW4 CU633906.2-205ENST00000624847 1468 ntTSL 5 BASIC6.4□□□□□ -1.39
SSBP3Q9BWW4 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
SSBP3Q9BWW4 FGG-204ENST00000405164 1539 ntTSL 5 BASIC6.4□□□□□ -1.39
SSBP3Q9BWW4 AC053481.2-202ENST00000582394 1500 ntBASIC6.4□□□□□ -1.39
SSBP3Q9BWW4 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC6.4□□□□□ -1.39
SSBP3Q9BWW4 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC6.4□□□□□ -1.39
SSBP3Q9BWW4 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
SSBP3Q9BWW4 KIF15-201ENST00000326047 4842 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 AC004862.1-209ENST00000437763 1678 ntTSL 5 BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 PSG5-202ENST00000366175 1766 ntTSL 5 BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 AGR2-203ENST00000419304 1778 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 ENOX1-AS1-201ENST00000444442 3907 ntTSL 5 BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 DIP2B-201ENST00000301180 8593 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 CEACAM6-201ENST00000199764 2700 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 TNFSF15-201ENST00000374044 2789 ntBASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 OAS2-207ENST00000620097 2908 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 WDR89-204ENST00000620954 2935 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 OR52A1-201ENST00000328942 939 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 RNU6-304P-201ENST00000364855 107 ntBASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 RNA5SP79-201ENST00000365193 109 ntBASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 RNU1-16P-201ENST00000365477 164 ntBASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 RN7SKP1-201ENST00000365525 307 ntBASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 CBWD5-205ENST00000377395 1143 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 FABP9-201ENST00000379071 497 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 RNU6-1320P-201ENST00000390838 107 ntBASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 RNU6-1269P-201ENST00000391139 107 ntBASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 RAD23BP2-201ENST00000416003 1207 ntBASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 DDX11L10-201ENST00000430178 571 ntBASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 AC097527.1-201ENST00000437031 530 ntBASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 PCMTD1P3-201ENST00000451824 472 ntBASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 AC073387.1-201ENST00000453261 709 ntBASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 RNU6-599P-201ENST00000459383 107 ntBASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 RNU6-1193P-201ENST00000459461 107 ntBASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 AC007547.2-201ENST00000468802 360 ntBASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 RN7SL861P-201ENST00000473793 285 ntBASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 RN7SL549P-201ENST00000478997 282 ntBASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 HMGB1P38-201ENST00000490557 577 ntBASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 FTH1P23-201ENST00000492727 550 ntBASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 GAPDHP61-201ENST00000507324 1005 ntBASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 AC112518.2-201ENST00000508565 425 ntBASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 AC106774.2-201ENST00000510266 406 ntBASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 AP000907.3-201ENST00000530733 322 ntTSL 3 BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 AL121820.1-201ENST00000556919 461 ntTSL 5 BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 AC013489.1-201ENST00000561140 598 ntTSL 3 BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 PEX11A-205ENST00000561257 978 ntTSL 2 BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 AC009063.2-201ENST00000563981 906 ntTSL 3 BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 MIR5192-201ENST00000579892 92 ntBASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 AC091132.5-205ENST00000585761 560 ntTSL 4 BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 BNIP3P30-201ENST00000601184 574 ntBASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 AC007262.1-201ENST00000604099 321 ntBASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 IZUMO3-203ENST00000604921 743 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 AC069234.5-201ENST00000611056 416 ntBASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 U6.42-201ENST00000618440 107 ntBASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 AC233702.2-201ENST00000618784 583 ntTSL 4 BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 RNU6-368P-201ENST00000620928 107 ntBASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 RNU6-538P-201ENST00000622329 107 ntBASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 AC025262.3-201ENST00000623666 360 ntBASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 OR10G8-202ENST00000641224 1033 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 PSMC2-203ENST00000435765 3054 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 AC135178.2-201ENST00000582471 3087 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 PDE1A-201ENST00000351439 2338 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 AC245177.1-201ENST00000375625 2369 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 AC239585.1-201ENST00000375644 2369 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 AC020904.2-202ENST00000614660 1401 ntBASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 NSRP1-217ENST00000612959 2420 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms