Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC5.96□□□□□ -1.46
SSX3Q99909 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.96□□□□□ -1.46
SSX3Q99909 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC5.96□□□□□ -1.46
SSX3Q99909 SNORA35.1-201ENST00000458908 128 ntBASIC5.96□□□□□ -1.46
SSX3Q99909 AL928654.1-201ENST00000476081 354 ntBASIC5.96□□□□□ -1.46
SSX3Q99909 AC009153.1-201ENST00000485799 496 ntBASIC5.96□□□□□ -1.46
SSX3Q99909 RN7SL153P-201ENST00000486501 292 ntBASIC5.96□□□□□ -1.46
SSX3Q99909 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC5.96□□□□□ -1.46
SSX3Q99909 AC112225.1-201ENST00000508230 297 ntBASIC5.96□□□□□ -1.46
SSX3Q99909 NPM1P21-201ENST00000513394 762 ntBASIC5.96□□□□□ -1.46
SSX3Q99909 AC055860.1-201ENST00000525523 688 ntTSL 5 BASIC5.96□□□□□ -1.46
SSX3Q99909 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC5.96□□□□□ -1.46
SSX3Q99909 OR6M3P-201ENST00000531567 700 ntBASIC5.96□□□□□ -1.46
SSX3Q99909 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
SSX3Q99909 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC5.96□□□□□ -1.46
SSX3Q99909 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC5.96□□□□□ -1.46
SSX3Q99909 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC5.96□□□□□ -1.46
SSX3Q99909 AC105275.2-201ENST00000567907 711 ntBASIC5.96□□□□□ -1.46
SSX3Q99909 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC5.96□□□□□ -1.46
SSX3Q99909 MIR1273F-201ENST00000580581 99 ntBASIC5.96□□□□□ -1.46
SSX3Q99909 AC010618.2-201ENST00000596192 460 ntTSL 3 BASIC5.96□□□□□ -1.46
SSX3Q99909 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC5.96□□□□□ -1.46
SSX3Q99909 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
SSX3Q99909 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SSX3Q99909 RRM2-213ENST00000641198 3431 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
SSX3Q99909 AL662795.2-201ENST00000624252 3706 ntBASIC5.96□□□□□ -1.46
SSX3Q99909 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SSX3Q99909 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SSX3Q99909 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
SSX3Q99909 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
SSX3Q99909 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC5.96□□□□□ -1.46
SSX3Q99909 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC5.96□□□□□ -1.46
SSX3Q99909 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.96□□□□□ -1.46
SSX3Q99909 CTNNA1P1-201ENST00000515849 2728 ntBASIC5.96□□□□□ -1.46
SSX3Q99909 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SSX3Q99909 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
SSX3Q99909 AC112243.1-201ENST00000623949 3851 ntBASIC5.96□□□□□ -1.46
SSX3Q99909 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
SSX3Q99909 ENO1P4-201ENST00000416471 1785 ntBASIC5.95□□□□□ -1.46
SSX3Q99909 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC5.95□□□□□ -1.46
SSX3Q99909 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
SSX3Q99909 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SSX3Q99909 DTNA-205ENST00000399113 2232 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
SSX3Q99909 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
SSX3Q99909 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SSX3Q99909 AC083837.1-201ENST00000565297 2994 ntBASIC5.95□□□□□ -1.46
SSX3Q99909 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC5.95□□□□□ -1.46
SSX3Q99909 IL22-201ENST00000328087 1150 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SSX3Q99909 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
SSX3Q99909 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC5.95□□□□□ -1.46
SSX3Q99909 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SSX3Q99909 RAC1P4-201ENST00000419413 579 ntBASIC5.95□□□□□ -1.46
SSX3Q99909 RPL34P27-201ENST00000428810 349 ntBASIC5.95□□□□□ -1.46
SSX3Q99909 RPL5P27-201ENST00000437011 881 ntBASIC5.95□□□□□ -1.46
SSX3Q99909 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC5.95□□□□□ -1.46
SSX3Q99909 AC068491.1-201ENST00000449539 1241 ntBASIC5.95□□□□□ -1.46
SSX3Q99909 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC5.95□□□□□ -1.46
SSX3Q99909 LINC00518-202ENST00000479822 906 ntTSL 3 BASIC5.95□□□□□ -1.46
SSX3Q99909 AC005017.1-201ENST00000482002 490 ntBASIC5.95□□□□□ -1.46
SSX3Q99909 RN7SL152P-201ENST00000484176 298 ntBASIC5.95□□□□□ -1.46
SSX3Q99909 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC5.95□□□□□ -1.46
SSX3Q99909 ZNF721-203ENST00000506646 935 ntTSL 2 BASIC5.95□□□□□ -1.46
SSX3Q99909 IGKV1D-32-201ENST00000517449 318 ntBASIC5.95□□□□□ -1.46
SSX3Q99909 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC5.95□□□□□ -1.46
SSX3Q99909 AC068790.1-201ENST00000536166 355 ntBASIC5.95□□□□□ -1.46
SSX3Q99909 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.95□□□□□ -1.46
SSX3Q99909 AL117192.1-204ENST00000553485 449 ntTSL 2 BASIC5.95□□□□□ -1.46
SSX3Q99909 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC5.95□□□□□ -1.46
SSX3Q99909 MIR4301-201ENST00000577203 66 ntBASIC5.95□□□□□ -1.46
SSX3Q99909 CCDC58P1-201ENST00000578567 430 ntBASIC5.95□□□□□ -1.46
SSX3Q99909 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC5.95□□□□□ -1.46
SSX3Q99909 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC5.95□□□□□ -1.46
SSX3Q99909 AC061975.3-201ENST00000583209 244 ntBASIC5.95□□□□□ -1.46
SSX3Q99909 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC5.95□□□□□ -1.46
SSX3Q99909 AL583832.1-201ENST00000603227 784 ntBASIC5.95□□□□□ -1.46
SSX3Q99909 AC103564.3-201ENST00000621194 220 ntBASIC5.95□□□□□ -1.46
SSX3Q99909 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC5.95□□□□□ -1.46
SSX3Q99909 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SSX3Q99909 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
SSX3Q99909 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SSX3Q99909 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SSX3Q99909 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SSX3Q99909 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SSX3Q99909 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC5.95□□□□□ -1.46
SSX3Q99909 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SSX3Q99909 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
SSX3Q99909 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SSX3Q99909 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC5.94□□□□□ -1.46
SSX3Q99909 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SSX3Q99909 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC5.94□□□□□ -1.46
SSX3Q99909 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SSX3Q99909 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SSX3Q99909 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SSX3Q99909 ZNF121-201ENST00000320451 1563 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
SSX3Q99909 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SSX3Q99909 AL136298.2-201ENST00000556497 1570 ntBASIC5.94□□□□□ -1.46
SSX3Q99909 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SSX3Q99909 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SSX3Q99909 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SSX3Q99909 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms