Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
NHLRC1Q6VVB1 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
NHLRC1Q6VVB1 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.23□□□□□ -1.41
NHLRC1Q6VVB1 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 CDY19P-201ENST00000411668 1613 ntBASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 CDY18P-201ENST00000438294 1609 ntBASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 ZNF710-AS1-202ENST00000620791 2133 ntBASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 RN7SKP55-201ENST00000364888 307 ntBASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 RNA5SP302-201ENST00000364896 100 ntBASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 RPL12P10-201ENST00000413498 498 ntBASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 AL354893.1-201ENST00000433735 348 ntBASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 RPL6P24-201ENST00000445338 864 ntBASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 AL359839.1-201ENST00000451975 1160 ntBASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 RPSAP48-201ENST00000466509 889 ntBASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 AC083806.1-201ENST00000468934 316 ntBASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 AC126615.1-201ENST00000470084 630 ntBASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 RN7SL776P-201ENST00000493390 268 ntBASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 LECT2-203ENST00000512872 762 ntTSL 5 BASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 IGLVV-66-201ENST00000523818 341 ntBASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 AC107952.1-201ENST00000524200 376 ntBASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 AC055860.1-201ENST00000525523 688 ntTSL 5 BASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 AL591767.3-201ENST00000554632 525 ntBASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 AC090286.3-201ENST00000573133 187 ntBASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 AC012511.1-201ENST00000608140 449 ntBASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 AL161420.1-201ENST00000619393 264 ntBASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 SMIM11B-203ENST00000622934 1193 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 AC087269.2-201ENST00000641764 975 ntBASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 AP002800.1-201ENST00000624982 2225 ntBASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.22□□□□□ -1.41
NHLRC1Q6VVB1 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
NHLRC1Q6VVB1 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
NHLRC1Q6VVB1 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
NHLRC1Q6VVB1 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
NHLRC1Q6VVB1 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
NHLRC1Q6VVB1 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
NHLRC1Q6VVB1 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.21□□□□□ -1.42
NHLRC1Q6VVB1 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
NHLRC1Q6VVB1 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
NHLRC1Q6VVB1 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC6.21□□□□□ -1.42
NHLRC1Q6VVB1 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
NHLRC1Q6VVB1 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
NHLRC1Q6VVB1 RN7SKP47-201ENST00000365347 328 ntBASIC6.21□□□□□ -1.42
NHLRC1Q6VVB1 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
NHLRC1Q6VVB1 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
NHLRC1Q6VVB1 AC090617.1-201ENST00000413674 323 ntTSL 2 BASIC6.21□□□□□ -1.42
NHLRC1Q6VVB1 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
NHLRC1Q6VVB1 AL359633.1-201ENST00000421403 310 ntBASIC6.21□□□□□ -1.42
NHLRC1Q6VVB1 AL355994.1-201ENST00000424379 260 ntBASIC6.21□□□□□ -1.42
NHLRC1Q6VVB1 AC114402.2-201ENST00000432760 643 ntBASIC6.21□□□□□ -1.42
NHLRC1Q6VVB1 ARPP21-217ENST00000436702 561 ntTSL 4 BASIC6.21□□□□□ -1.42
NHLRC1Q6VVB1 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC6.21□□□□□ -1.42
NHLRC1Q6VVB1 AL929410.2-201ENST00000451170 189 ntBASIC6.21□□□□□ -1.42
NHLRC1Q6VVB1 SRP68P2-201ENST00000456184 254 ntBASIC6.21□□□□□ -1.42
NHLRC1Q6VVB1 AL591122.1-201ENST00000487348 492 ntBASIC6.21□□□□□ -1.42
NHLRC1Q6VVB1 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC6.21□□□□□ -1.42
NHLRC1Q6VVB1 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
NHLRC1Q6VVB1 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC6.21□□□□□ -1.42
NHLRC1Q6VVB1 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC6.21□□□□□ -1.42
NHLRC1Q6VVB1 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC6.21□□□□□ -1.42
NHLRC1Q6VVB1 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms