Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 AL161725.1-210ENST00000590240 1224 ntTSL 5 BASIC6.19□□□□□ -1.42
C11orf88Q6PI97 AC137695.1-201ENST00000604126 489 ntBASIC6.19□□□□□ -1.42
C11orf88Q6PI97 AC012488.1-201ENST00000611221 640 ntBASIC6.19□□□□□ -1.42
C11orf88Q6PI97 AP003068.4-201ENST00000623192 802 ntBASIC6.19□□□□□ -1.42
C11orf88Q6PI97 AC018628.1-201ENST00000624147 3819 ntBASIC6.19□□□□□ -1.42
C11orf88Q6PI97 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
C11orf88Q6PI97 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
C11orf88Q6PI97 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6.19□□□□□ -1.42
C11orf88Q6PI97 DCP1A-201ENST00000294241 1853 ntTSL 2 BASIC6.19□□□□□ -1.42
C11orf88Q6PI97 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
C11orf88Q6PI97 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
C11orf88Q6PI97 FAM122C-202ENST00000370785 1344 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
C11orf88Q6PI97 BIN2P2-201ENST00000503900 1303 ntBASIC6.19□□□□□ -1.42
C11orf88Q6PI97 AC011503.2-201ENST00000594230 1500 ntBASIC6.19□□□□□ -1.42
C11orf88Q6PI97 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
C11orf88Q6PI97 THAP12P8-201ENST00000447914 2115 ntBASIC6.19□□□□□ -1.42
C11orf88Q6PI97 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC6.19□□□□□ -1.42
C11orf88Q6PI97 MTCO1P22-201ENST00000604619 1360 ntBASIC6.18□□□□□ -1.42
C11orf88Q6PI97 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
C11orf88Q6PI97 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC6.18□□□□□ -1.42
C11orf88Q6PI97 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
C11orf88Q6PI97 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.18□□□□□ -1.42
C11orf88Q6PI97 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.18□□□□□ -1.42
C11orf88Q6PI97 AC069222.1-201ENST00000608028 3360 ntBASIC6.18□□□□□ -1.42
C11orf88Q6PI97 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC6.18□□□□□ -1.42
C11orf88Q6PI97 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
C11orf88Q6PI97 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC6.18□□□□□ -1.42
C11orf88Q6PI97 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC6.18□□□□□ -1.42
C11orf88Q6PI97 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
C11orf88Q6PI97 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.18□□□□□ -1.42
C11orf88Q6PI97 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.18□□□□□ -1.42
C11orf88Q6PI97 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
C11orf88Q6PI97 OR7E25P-201ENST00000344844 931 ntBASIC6.18□□□□□ -1.42
C11orf88Q6PI97 SGMS1-201ENST00000361543 1096 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
C11orf88Q6PI97 RNA5SP389-201ENST00000362610 115 ntBASIC6.18□□□□□ -1.42
C11orf88Q6PI97 RNA5SP226-201ENST00000362653 115 ntBASIC6.18□□□□□ -1.42
C11orf88Q6PI97 RNA5SP79-201ENST00000365193 109 ntBASIC6.18□□□□□ -1.42
C11orf88Q6PI97 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
C11orf88Q6PI97 GAGE12E-201ENST00000381698 520 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
C11orf88Q6PI97 MAML3-201ENST00000398940 831 ntTSL 5 BASIC6.18□□□□□ -1.42
C11orf88Q6PI97 HSPE1-202ENST00000409468 570 ntTSL 2 BASIC6.18□□□□□ -1.42
C11orf88Q6PI97 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
C11orf88Q6PI97 AC009495.3-201ENST00000425688 779 ntTSL 3 BASIC6.18□□□□□ -1.42
C11orf88Q6PI97 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC6.18□□□□□ -1.42
C11orf88Q6PI97 HIST1H2APS6-201ENST00000448609 364 ntBASIC6.18□□□□□ -1.42
C11orf88Q6PI97 IGKV1OR2-2-201ENST00000451163 355 ntBASIC6.18□□□□□ -1.42
C11orf88Q6PI97 TCEAL4P1-201ENST00000453620 588 ntBASIC6.18□□□□□ -1.42
C11orf88Q6PI97 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC6.18□□□□□ -1.42
C11orf88Q6PI97 RN7SL19P-201ENST00000462522 306 ntBASIC6.18□□□□□ -1.42
C11orf88Q6PI97 TDGF1P6-201ENST00000463873 448 ntBASIC6.18□□□□□ -1.42
C11orf88Q6PI97 AC097263.1-201ENST00000496795 606 ntBASIC6.18□□□□□ -1.42
C11orf88Q6PI97 ASNSP4-201ENST00000511103 447 ntBASIC6.18□□□□□ -1.42
C11orf88Q6PI97 AC134698.1-201ENST00000511619 643 ntBASIC6.18□□□□□ -1.42
C11orf88Q6PI97 AC106800.2-201ENST00000514009 1103 ntBASIC6.18□□□□□ -1.42
C11orf88Q6PI97 NR1I3-233ENST00000515452 1093 ntTSL 2 BASIC6.18□□□□□ -1.42
C11orf88Q6PI97 RNA5SP75-201ENST00000516841 111 ntBASIC6.18□□□□□ -1.42
C11orf88Q6PI97 SNORA81.2-201ENST00000516868 170 ntBASIC6.18□□□□□ -1.42
C11orf88Q6PI97 AC018541.1-201ENST00000517706 764 ntTSL 3 BASIC6.18□□□□□ -1.42
C11orf88Q6PI97 OR7E2P-201ENST00000533071 889 ntBASIC6.18□□□□□ -1.42
C11orf88Q6PI97 AP000619.1-201ENST00000540293 1000 ntBASIC6.18□□□□□ -1.42
C11orf88Q6PI97 AC084033.1-201ENST00000550830 633 ntBASIC6.18□□□□□ -1.42
C11orf88Q6PI97 AC092757.2-201ENST00000559026 633 ntTSL 4 BASIC6.18□□□□□ -1.42
C11orf88Q6PI97 TRIM69-210ENST00000561043 1017 ntTSL 3 BASIC6.18□□□□□ -1.42
C11orf88Q6PI97 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC6.18□□□□□ -1.42
C11orf88Q6PI97 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC6.18□□□□□ -1.42
C11orf88Q6PI97 MIR3135A-201ENST00000578460 77 ntBASIC6.18□□□□□ -1.42
C11orf88Q6PI97 RN7SL786P-201ENST00000579130 298 ntBASIC6.18□□□□□ -1.42
C11orf88Q6PI97 AC005410.2-201ENST00000580270 463 ntTSL 3 BASIC6.18□□□□□ -1.42
C11orf88Q6PI97 AC104984.3-201ENST00000581946 546 ntTSL 5 BASIC6.18□□□□□ -1.42
C11orf88Q6PI97 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC6.18□□□□□ -1.42
C11orf88Q6PI97 AL050343.1-203ENST00000586761 1290 ntTSL 3 BASIC6.18□□□□□ -1.42
C11orf88Q6PI97 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.18□□□□□ -1.42
C11orf88Q6PI97 AC073389.2-201ENST00000606726 571 ntTSL 4 BASIC6.18□□□□□ -1.42
C11orf88Q6PI97 AC087893.2-201ENST00000623272 255 ntBASIC6.18□□□□□ -1.42
C11orf88Q6PI97 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
C11orf88Q6PI97 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
C11orf88Q6PI97 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.18□□□□□ -1.42
C11orf88Q6PI97 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
C11orf88Q6PI97 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
C11orf88Q6PI97 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
C11orf88Q6PI97 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
C11orf88Q6PI97 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.18□□□□□ -1.42
C11orf88Q6PI97 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC6.18□□□□□ -1.42
C11orf88Q6PI97 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
C11orf88Q6PI97 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
C11orf88Q6PI97 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
C11orf88Q6PI97 MUSK-205ENST00000374448 2754 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
C11orf88Q6PI97 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
C11orf88Q6PI97 MAPK10-344ENST00000641718 3746 ntBASIC6.17□□□□□ -1.42
C11orf88Q6PI97 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC6.17□□□□□ -1.42
C11orf88Q6PI97 MBNL3-203ENST00000370849 1444 ntTSL 2 BASIC6.17□□□□□ -1.42
C11orf88Q6PI97 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
C11orf88Q6PI97 AP000866.6-201ENST00000638898 3579 ntBASIC6.17□□□□□ -1.42
C11orf88Q6PI97 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
C11orf88Q6PI97 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.17□□□□□ -1.42
C11orf88Q6PI97 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
C11orf88Q6PI97 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
C11orf88Q6PI97 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
C11orf88Q6PI97 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
C11orf88Q6PI97 PPP1R1C-202ENST00000409137 3004 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms