Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AC090058.1-201ENST00000498788 435 ntBASIC4.84□□□□□ -1.63
CKS1BP61024 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC4.84□□□□□ -1.63
CKS1BP61024 AC008967.1-201ENST00000504843 163 ntBASIC4.84□□□□□ -1.63
CKS1BP61024 AC026415.1-201ENST00000505404 471 ntTSL 5 BASIC4.84□□□□□ -1.63
CKS1BP61024 AC004672.2-201ENST00000537181 574 ntTSL 2 BASIC4.84□□□□□ -1.63
CKS1BP61024 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC4.84□□□□□ -1.63
CKS1BP61024 HNRNPA1P71-201ENST00000559135 950 ntBASIC4.84□□□□□ -1.63
CKS1BP61024 AC010931.3-201ENST00000561647 554 ntTSL 3 BASIC4.84□□□□□ -1.63
CKS1BP61024 AC034105.2-201ENST00000561866 238 ntBASIC4.84□□□□□ -1.63
CKS1BP61024 LINC02178-201ENST00000566876 425 ntTSL 3 BASIC4.84□□□□□ -1.63
CKS1BP61024 AC023827.2-201ENST00000566880 1061 ntBASIC4.84□□□□□ -1.63
CKS1BP61024 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC4.84□□□□□ -1.63
CKS1BP61024 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC4.84□□□□□ -1.63
CKS1BP61024 AC011497.2-201ENST00000600255 639 ntBASIC4.84□□□□□ -1.63
CKS1BP61024 EDRF1-AS1-205ENST00000601363 712 ntTSL 5 BASIC4.84□□□□□ -1.63
CKS1BP61024 AC068802.1-201ENST00000603420 732 ntBASIC4.84□□□□□ -1.63
CKS1BP61024 AC114810.1-201ENST00000607415 473 ntBASIC4.84□□□□□ -1.63
CKS1BP61024 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CKS1BP61024 AC026468.1-201ENST00000614981 107 ntBASIC4.84□□□□□ -1.63
CKS1BP61024 SPINK6-203ENST00000621437 605 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
CKS1BP61024 AL049536.1-202ENST00000623572 455 ntTSL 5 BASIC4.84□□□□□ -1.63
CKS1BP61024 METAP1-212ENST00000625963 147 ntTSL 5 BASIC4.84□□□□□ -1.63
CKS1BP61024 MFSD8-234ENST00000641503 1082 ntBASIC4.84□□□□□ -1.63
CKS1BP61024 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CKS1BP61024 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC4.84□□□□□ -1.63
CKS1BP61024 RMST-209ENST00000639542 3269 ntTSL 5 BASIC4.84□□□□□ -1.63
CKS1BP61024 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
CKS1BP61024 AC011504.1-201ENST00000623331 4103 ntBASIC4.84□□□□□ -1.64
CKS1BP61024 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.84□□□□□ -1.64
CKS1BP61024 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
CKS1BP61024 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.84□□□□□ -1.64
CKS1BP61024 AL359976.1-201ENST00000418655 3528 ntBASIC4.84□□□□□ -1.64
CKS1BP61024 CASC19-260ENST00000641828 2001 ntBASIC4.84□□□□□ -1.64
CKS1BP61024 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CKS1BP61024 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
CKS1BP61024 NUCB2-201ENST00000323688 1905 ntAPPRIS ALT1 TSL 2 BASIC4.84□□□□□ -1.64
CKS1BP61024 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
CKS1BP61024 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CKS1BP61024 AL603750.1-201ENST00000624216 1717 ntBASIC4.83□□□□□ -1.64
CKS1BP61024 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CKS1BP61024 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CKS1BP61024 ATP9B-208ENST00000586722 1650 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CKS1BP61024 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC4.83□□□□□ -1.64
CKS1BP61024 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC4.83□□□□□ -1.64
CKS1BP61024 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CKS1BP61024 PIK3C3-204ENST00000586545 1554 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CKS1BP61024 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.83□□□□□ -1.64
CKS1BP61024 TRIM60P14-201ENST00000513444 1419 ntBASIC4.83□□□□□ -1.64
CKS1BP61024 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC4.83□□□□□ -1.64
CKS1BP61024 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CKS1BP61024 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CKS1BP61024 SAMM50P1-201ENST00000455403 1399 ntBASIC4.83□□□□□ -1.64
CKS1BP61024 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
CKS1BP61024 TCP11X1-202ENST00000622971 1372 ntBASIC4.83□□□□□ -1.64
CKS1BP61024 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CKS1BP61024 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC4.83□□□□□ -1.64
CKS1BP61024 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
CKS1BP61024 AC104699.1-201ENST00000352271 414 ntTSL 3 BASIC4.83□□□□□ -1.64
CKS1BP61024 KLRG1-202ENST00000356986 1206 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CKS1BP61024 U3.48-201ENST00000363172 216 ntBASIC4.83□□□□□ -1.64
CKS1BP61024 RNA5SP79-201ENST00000365193 109 ntBASIC4.83□□□□□ -1.64
CKS1BP61024 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC4.83□□□□□ -1.64
CKS1BP61024 ERMN-202ENST00000409216 746 ntTSL 4 BASIC4.83□□□□□ -1.64
CKS1BP61024 CRIP1P3-201ENST00000416794 220 ntBASIC4.83□□□□□ -1.64
CKS1BP61024 ZEB1-AS1-202ENST00000424191 320 ntTSL 3 BASIC4.83□□□□□ -1.64
CKS1BP61024 MED15P9-201ENST00000424716 533 ntBASIC4.83□□□□□ -1.64
CKS1BP61024 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CKS1BP61024 BX679664.2-201ENST00000439282 283 ntBASIC4.83□□□□□ -1.64
CKS1BP61024 AL050402.1-201ENST00000440477 770 ntTSL 3 BASIC4.83□□□□□ -1.64
CKS1BP61024 AL021939.1-201ENST00000441868 886 ntBASIC4.83□□□□□ -1.64
CKS1BP61024 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC4.83□□□□□ -1.64
CKS1BP61024 AL049820.1-201ENST00000442936 423 ntTSL 2 BASIC4.83□□□□□ -1.64
CKS1BP61024 TDRG1-202ENST00000448433 1015 ntTSL 3 BASIC4.83□□□□□ -1.64
CKS1BP61024 PRDX1P1-201ENST00000449329 596 ntBASIC4.83□□□□□ -1.64
CKS1BP61024 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC4.83□□□□□ -1.64
CKS1BP61024 EAF2-202ENST00000451944 960 ntTSL 2 BASIC4.83□□□□□ -1.64
CKS1BP61024 AC114755.1-201ENST00000453101 868 ntBASIC4.83□□□□□ -1.64
CKS1BP61024 PSPC1P2-201ENST00000455130 225 ntBASIC4.83□□□□□ -1.64
CKS1BP61024 AC096915.1-201ENST00000456185 512 ntBASIC4.83□□□□□ -1.64
CKS1BP61024 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.83□□□□□ -1.64
CKS1BP61024 RPS14P8-201ENST00000478778 369 ntBASIC4.83□□□□□ -1.64
CKS1BP61024 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC4.83□□□□□ -1.64
CKS1BP61024 ZNF695-204ENST00000487338 826 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CKS1BP61024 RPS4XP23-201ENST00000487801 237 ntBASIC4.83□□□□□ -1.64
CKS1BP61024 RN7SL124P-201ENST00000498656 285 ntBASIC4.83□□□□□ -1.64
CKS1BP61024 AC097486.1-201ENST00000515331 210 ntBASIC4.83□□□□□ -1.64
CKS1BP61024 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC4.83□□□□□ -1.64
CKS1BP61024 AP000873.4-201ENST00000528133 905 ntTSL 3 BASIC4.83□□□□□ -1.64
CKS1BP61024 EEF1A1P17-201ENST00000547505 1275 ntBASIC4.83□□□□□ -1.64
CKS1BP61024 DAZAP2-210ENST00000551313 587 ntTSL 3 BASIC4.83□□□□□ -1.64
CKS1BP61024 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CKS1BP61024 AC073657.1-202ENST00000562063 334 ntTSL 3 BASIC4.83□□□□□ -1.64
CKS1BP61024 DNM1P31-201ENST00000564149 696 ntBASIC4.83□□□□□ -1.64
CKS1BP61024 LINC01989-201ENST00000566930 1081 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CKS1BP61024 AC011840.3-201ENST00000579378 280 ntTSL 3 BASIC4.83□□□□□ -1.64
CKS1BP61024 MCM3AP-AS1-207ENST00000588753 589 ntTSL 4 BASIC4.83□□□□□ -1.64
CKS1BP61024 AC010719.1-201ENST00000602992 747 ntBASIC4.83□□□□□ -1.64
CKS1BP61024 AL137190.1-201ENST00000603288 282 ntBASIC4.83□□□□□ -1.64
CKS1BP61024 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC4.83□□□□□ -1.64
CKS1BP61024 AC005785.2-201ENST00000624655 631 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 161.1 ms