Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SSR1P43307 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SSR1P43307 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SSR1P43307 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC7.39□□□□□ -1.23
SSR1P43307 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SSR1P43307 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
SSR1P43307 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SSR1P43307 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SSR1P43307 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
SSR1P43307 ZMYND11-216ENST00000602682 1687 ntTSL 5 BASIC7.38□□□□□ -1.23
SSR1P43307 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC7.38□□□□□ -1.23
SSR1P43307 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
SSR1P43307 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC7.38□□□□□ -1.23
SSR1P43307 AC104837.1-201ENST00000444644 1587 ntBASIC7.38□□□□□ -1.23
SSR1P43307 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC7.38□□□□□ -1.23
SSR1P43307 SLC2A3P2-201ENST00000331747 1480 ntBASIC7.38□□□□□ -1.23
SSR1P43307 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC7.38□□□□□ -1.23
SSR1P43307 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC7.38□□□□□ -1.23
SSR1P43307 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC7.38□□□□□ -1.23
SSR1P43307 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SSR1P43307 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
SSR1P43307 Y_RNA.209-201ENST00000364156 111 ntBASIC7.38□□□□□ -1.23
SSR1P43307 RNA5SP427-201ENST00000365323 119 ntBASIC7.38□□□□□ -1.23
SSR1P43307 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
SSR1P43307 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC7.38□□□□□ -1.23
SSR1P43307 SNX18P13-201ENST00000412442 529 ntBASIC7.38□□□□□ -1.23
SSR1P43307 AC008753.1-201ENST00000423096 284 ntBASIC7.38□□□□□ -1.23
SSR1P43307 ATP5LP4-201ENST00000434169 307 ntBASIC7.38□□□□□ -1.23
SSR1P43307 AC009237.4-201ENST00000441078 238 ntBASIC7.38□□□□□ -1.23
SSR1P43307 LINC02243-201ENST00000441841 961 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SSR1P43307 HBG2-204ENST00000444587 307 ntTSL 2 BASIC7.38□□□□□ -1.23
SSR1P43307 RPL21P33-201ENST00000444831 484 ntBASIC7.38□□□□□ -1.23
SSR1P43307 CEACAMP5-201ENST00000448037 961 ntBASIC7.38□□□□□ -1.23
SSR1P43307 AL355472.1-201ENST00000451795 575 ntTSL 5 BASIC7.38□□□□□ -1.23
SSR1P43307 AC008620.1-201ENST00000468453 592 ntBASIC7.38□□□□□ -1.23
SSR1P43307 AC026782.2-201ENST00000510845 636 ntBASIC7.38□□□□□ -1.23
SSR1P43307 AC016559.1-201ENST00000511420 199 ntBASIC7.38□□□□□ -1.23
SSR1P43307 AL049780.1-201ENST00000554430 489 ntTSL 3 BASIC7.38□□□□□ -1.23
SSR1P43307 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC7.38□□□□□ -1.23
SSR1P43307 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC7.38□□□□□ -1.23
SSR1P43307 SMIM11B-203ENST00000622934 1193 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SSR1P43307 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SSR1P43307 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC7.38□□□□□ -1.23
SSR1P43307 AC020978.6-201ENST00000571197 3177 ntBASIC7.38□□□□□ -1.23
SSR1P43307 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC7.38□□□□□ -1.23
SSR1P43307 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
SSR1P43307 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
SSR1P43307 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SSR1P43307 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC7.37□□□□□ -1.23
SSR1P43307 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SSR1P43307 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
SSR1P43307 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC7.37□□□□□ -1.23
SSR1P43307 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
SSR1P43307 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC7.37□□□□□ -1.23
SSR1P43307 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
SSR1P43307 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
SSR1P43307 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
SSR1P43307 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
SSR1P43307 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
SSR1P43307 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
SSR1P43307 RPL12P1-201ENST00000374520 498 ntBASIC7.37□□□□□ -1.23
SSR1P43307 RPL31-203ENST00000409028 1110 ntTSL 2 BASIC7.37□□□□□ -1.23
SSR1P43307 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC7.37□□□□□ -1.23
SSR1P43307 RPL23AP18-201ENST00000416139 468 ntBASIC7.37□□□□□ -1.23
SSR1P43307 AC117434.1-201ENST00000419971 836 ntBASIC7.37□□□□□ -1.23
SSR1P43307 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC7.37□□□□□ -1.23
SSR1P43307 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
SSR1P43307 GAS5-211ENST00000432536 959 ntTSL 2 BASIC7.37□□□□□ -1.23
SSR1P43307 AL133215.1-201ENST00000447344 342 ntTSL 3 BASIC7.37□□□□□ -1.23
SSR1P43307 AC078788.2-201ENST00000462300 382 ntTSL 3 BASIC7.37□□□□□ -1.23
SSR1P43307 PGBD4P1-201ENST00000473644 407 ntBASIC7.37□□□□□ -1.23
SSR1P43307 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC7.37□□□□□ -1.23
SSR1P43307 PDPN-205ENST00000487038 607 ntTSL 2 BASIC7.37□□□□□ -1.23
SSR1P43307 RN7SL306P-201ENST00000492941 296 ntBASIC7.37□□□□□ -1.23
SSR1P43307 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC7.37□□□□□ -1.23
SSR1P43307 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC7.37□□□□□ -1.23
SSR1P43307 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC7.37□□□□□ -1.23
SSR1P43307 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC7.37□□□□□ -1.23
SSR1P43307 OR5M4P-201ENST00000529436 925 ntBASIC7.37□□□□□ -1.23
SSR1P43307 LYZ-202ENST00000548839 558 ntTSL 2 BASIC7.37□□□□□ -1.23
SSR1P43307 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC7.37□□□□□ -1.23
SSR1P43307 AC096708.2-201ENST00000577676 512 ntBASIC7.37□□□□□ -1.23
SSR1P43307 AC087575.1-201ENST00000585087 229 ntBASIC7.37□□□□□ -1.23
SSR1P43307 AC009237.12-201ENST00000604755 742 ntBASIC7.37□□□□□ -1.23
SSR1P43307 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC7.37□□□□□ -1.23
SSR1P43307 AC011471.4-201ENST00000638271 216 ntBASIC7.37□□□□□ -1.23
SSR1P43307 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC7.37□□□□□ -1.23
SSR1P43307 DDX43P1-201ENST00000510713 1763 ntBASIC7.37□□□□□ -1.23
SSR1P43307 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC7.37□□□□□ -1.23
SSR1P43307 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
SSR1P43307 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC7.37□□□□□ -1.23
SSR1P43307 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SSR1P43307 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
SSR1P43307 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
SSR1P43307 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC7.37□□□□□ -1.23
SSR1P43307 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
SSR1P43307 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SSR1P43307 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SSR1P43307 AL136531.3-201ENST00000624378 3658 ntBASIC7.37□□□□□ -1.23
SSR1P43307 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC7.37□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms