Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 OLFML1-201ENST00000329293 2792 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
HMGA1P17096 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC6.98□□□□□ -1.29
HMGA1P17096 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC6.98□□□□□ -1.29
HMGA1P17096 AC124045.1-201ENST00000606008 1953 ntBASIC6.98□□□□□ -1.29
HMGA1P17096 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.98□□□□□ -1.29
HMGA1P17096 AC125603.4-201ENST00000621942 2699 ntBASIC6.98□□□□□ -1.29
HMGA1P17096 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC6.98□□□□□ -1.29
HMGA1P17096 ZNF812P-202ENST00000536819 1890 ntTSL 2 BASIC6.98□□□□□ -1.29
HMGA1P17096 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
HMGA1P17096 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
HMGA1P17096 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
HMGA1P17096 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HMGA1P17096 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HMGA1P17096 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC6.97□□□□□ -1.29
HMGA1P17096 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC6.97□□□□□ -1.29
HMGA1P17096 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC6.97□□□□□ -1.29
HMGA1P17096 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
HMGA1P17096 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
HMGA1P17096 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.97□□□□□ -1.29
HMGA1P17096 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC6.97□□□□□ -1.29
HMGA1P17096 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC6.97□□□□□ -1.29
HMGA1P17096 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC6.97□□□□□ -1.29
HMGA1P17096 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HMGA1P17096 RNA5SP512-201ENST00000364550 120 ntBASIC6.97□□□□□ -1.29
HMGA1P17096 RN7SKP187-201ENST00000365536 330 ntBASIC6.97□□□□□ -1.29
HMGA1P17096 MRPS6P2-201ENST00000381143 370 ntBASIC6.97□□□□□ -1.29
HMGA1P17096 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC6.97□□□□□ -1.29
HMGA1P17096 RN7SKP296-201ENST00000411185 341 ntBASIC6.97□□□□□ -1.29
HMGA1P17096 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.97□□□□□ -1.29
HMGA1P17096 RANP6-201ENST00000413691 644 ntBASIC6.97□□□□□ -1.29
HMGA1P17096 AL359885.1-201ENST00000415786 903 ntBASIC6.97□□□□□ -1.29
HMGA1P17096 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.97□□□□□ -1.29
HMGA1P17096 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC6.97□□□□□ -1.29
HMGA1P17096 PLA2G12AP2-201ENST00000424744 264 ntBASIC6.97□□□□□ -1.29
HMGA1P17096 DUTP4-201ENST00000424782 475 ntBASIC6.97□□□□□ -1.29
HMGA1P17096 AC007383.1-201ENST00000445875 636 ntBASIC6.97□□□□□ -1.29
HMGA1P17096 TIMM8BP2-201ENST00000445940 251 ntBASIC6.97□□□□□ -1.29
HMGA1P17096 AC097359.1-201ENST00000447946 463 ntBASIC6.97□□□□□ -1.29
HMGA1P17096 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
HMGA1P17096 OR9L1P-201ENST00000529493 933 ntBASIC6.97□□□□□ -1.29
HMGA1P17096 OR52K3P-201ENST00000531655 943 ntBASIC6.97□□□□□ -1.29
HMGA1P17096 AC124891.1-201ENST00000536322 519 ntBASIC6.97□□□□□ -1.29
HMGA1P17096 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
HMGA1P17096 AC244034.2-201ENST00000562504 509 ntBASIC6.97□□□□□ -1.29
HMGA1P17096 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
HMGA1P17096 AC092718.4-201ENST00000566639 716 ntBASIC6.97□□□□□ -1.29
HMGA1P17096 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC6.97□□□□□ -1.29
HMGA1P17096 AL589765.6-201ENST00000601909 549 ntBASIC6.97□□□□□ -1.29
HMGA1P17096 AC005828.7-201ENST00000607331 556 ntBASIC6.97□□□□□ -1.29
HMGA1P17096 AC093635.1-201ENST00000609028 555 ntBASIC6.97□□□□□ -1.29
HMGA1P17096 AL353753.1-201ENST00000612217 2320 ntTSL 2 BASIC6.97□□□□□ -1.29
HMGA1P17096 Six3os1_4.1-201ENST00000615706 324 ntBASIC6.97□□□□□ -1.29
HMGA1P17096 TEX41-271ENST00000628213 993 ntTSL 5 BASIC6.97□□□□□ -1.29
HMGA1P17096 PRRG1-201ENST00000378628 4493 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HMGA1P17096 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC6.97□□□□□ -1.29
HMGA1P17096 AP005139.1-201ENST00000580702 1647 ntBASIC6.97□□□□□ -1.29
HMGA1P17096 ZNF846-202ENST00000586293 1621 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
HMGA1P17096 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
HMGA1P17096 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
HMGA1P17096 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HMGA1P17096 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
HMGA1P17096 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC6.96□□□□□ -1.29
HMGA1P17096 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC6.96□□□□□ -1.29
HMGA1P17096 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
HMGA1P17096 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
HMGA1P17096 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC6.96□□□□□ -1.29
HMGA1P17096 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
HMGA1P17096 ABI1-206ENST00000376140 1446 ntTSL 5 BASIC6.96□□□□□ -1.3
HMGA1P17096 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
HMGA1P17096 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.96□□□□□ -1.3
HMGA1P17096 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
HMGA1P17096 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
HMGA1P17096 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
HMGA1P17096 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
HMGA1P17096 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.96□□□□□ -1.3
HMGA1P17096 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC6.96□□□□□ -1.3
HMGA1P17096 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.96□□□□□ -1.3
HMGA1P17096 GPN3P1-201ENST00000423883 535 ntBASIC6.96□□□□□ -1.3
HMGA1P17096 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.96□□□□□ -1.3
HMGA1P17096 MORF4L1P5-201ENST00000433352 961 ntBASIC6.96□□□□□ -1.3
HMGA1P17096 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.96□□□□□ -1.3
HMGA1P17096 AC019084.1-201ENST00000457337 432 ntBASIC6.96□□□□□ -1.3
HMGA1P17096 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.96□□□□□ -1.3
HMGA1P17096 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.96□□□□□ -1.3
HMGA1P17096 HMGN1P16-201ENST00000508308 283 ntBASIC6.96□□□□□ -1.3
HMGA1P17096 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
HMGA1P17096 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC6.96□□□□□ -1.3
HMGA1P17096 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.96□□□□□ -1.3
HMGA1P17096 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.96□□□□□ -1.3
HMGA1P17096 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.96□□□□□ -1.3
HMGA1P17096 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC6.96□□□□□ -1.3
HMGA1P17096 AC004232.1-201ENST00000571388 208 ntBASIC6.96□□□□□ -1.3
HMGA1P17096 OR1E3-201ENST00000575608 948 ntBASIC6.96□□□□□ -1.3
HMGA1P17096 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC6.96□□□□□ -1.3
HMGA1P17096 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6.96□□□□□ -1.3
HMGA1P17096 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
HMGA1P17096 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
HMGA1P17096 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
HMGA1P17096 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
HMGA1P17096 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC6.96□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 229.2 ms