Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC6.21□□□□□ -1.42
ZIC3O60481 CA10-204ENST00000570565 2276 ntTSL 5 BASIC6.21□□□□□ -1.42
ZIC3O60481 RGS5-215ENST00000439699 1441 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
ZIC3O60481 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
ZIC3O60481 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
ZIC3O60481 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC6.21□□□□□ -1.42
ZIC3O60481 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
ZIC3O60481 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
ZIC3O60481 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
ZIC3O60481 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
ZIC3O60481 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
ZIC3O60481 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC6.21□□□□□ -1.42
ZIC3O60481 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC6.21□□□□□ -1.42
ZIC3O60481 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC6.21□□□□□ -1.42
ZIC3O60481 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC6.21□□□□□ -1.42
ZIC3O60481 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ZIC3O60481 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC6.2□□□□□ -1.42
ZIC3O60481 AC123769.2-201ENST00000624332 5984 ntBASIC6.2□□□□□ -1.42
ZIC3O60481 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
ZIC3O60481 AP003119.3-201ENST00000566747 4192 ntBASIC6.2□□□□□ -1.42
ZIC3O60481 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ZIC3O60481 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
ZIC3O60481 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ZIC3O60481 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC6.2□□□□□ -1.42
ZIC3O60481 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
ZIC3O60481 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
ZIC3O60481 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
ZIC3O60481 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC6.2□□□□□ -1.42
ZIC3O60481 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC6.2□□□□□ -1.42
ZIC3O60481 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
ZIC3O60481 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ZIC3O60481 AC012213.2-201ENST00000562917 4597 ntBASIC6.2□□□□□ -1.42
ZIC3O60481 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
ZIC3O60481 FOLH1-213ENST00000533034 2225 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ZIC3O60481 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
ZIC3O60481 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ZIC3O60481 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ZIC3O60481 RN7SKP118-201ENST00000364331 330 ntBASIC6.2□□□□□ -1.42
ZIC3O60481 RN7SKP191-201ENST00000364713 306 ntBASIC6.2□□□□□ -1.42
ZIC3O60481 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
ZIC3O60481 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC6.2□□□□□ -1.42
ZIC3O60481 RN7SKP271-201ENST00000410528 320 ntBASIC6.2□□□□□ -1.42
ZIC3O60481 DUTP4-201ENST00000424782 475 ntBASIC6.2□□□□□ -1.42
ZIC3O60481 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC6.2□□□□□ -1.42
ZIC3O60481 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ZIC3O60481 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC6.2□□□□□ -1.42
ZIC3O60481 BMS1P11-201ENST00000442351 885 ntBASIC6.2□□□□□ -1.42
ZIC3O60481 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC6.2□□□□□ -1.42
ZIC3O60481 BMS1P9-201ENST00000457640 885 ntBASIC6.2□□□□□ -1.42
ZIC3O60481 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC6.2□□□□□ -1.42
ZIC3O60481 RN7SL350P-201ENST00000492591 299 ntBASIC6.2□□□□□ -1.42
ZIC3O60481 AL133372.1-201ENST00000493565 745 ntBASIC6.2□□□□□ -1.42
ZIC3O60481 B3GNTL1P1-201ENST00000509174 289 ntBASIC6.2□□□□□ -1.42
ZIC3O60481 AC016144.1-201ENST00000548175 1087 ntBASIC6.2□□□□□ -1.42
ZIC3O60481 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC6.2□□□□□ -1.42
ZIC3O60481 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC6.2□□□□□ -1.42
ZIC3O60481 FXNP1-201ENST00000555153 337 ntBASIC6.2□□□□□ -1.42
ZIC3O60481 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC6.2□□□□□ -1.42
ZIC3O60481 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC6.2□□□□□ -1.42
ZIC3O60481 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC6.2□□□□□ -1.42
ZIC3O60481 AC133552.4-201ENST00000576103 676 ntBASIC6.2□□□□□ -1.42
ZIC3O60481 MIR6849-201ENST00000618543 69 ntBASIC6.2□□□□□ -1.42
ZIC3O60481 MIR8089-201ENST00000620165 82 ntBASIC6.2□□□□□ -1.42
ZIC3O60481 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ZIC3O60481 AC034229.6-201ENST00000623704 224 ntBASIC6.2□□□□□ -1.42
ZIC3O60481 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ZIC3O60481 SNORA16A-202ENST00000628458 135 ntBASIC6.2□□□□□ -1.42
ZIC3O60481 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC6.2□□□□□ -1.42
ZIC3O60481 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
ZIC3O60481 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
ZIC3O60481 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
ZIC3O60481 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC6.2□□□□□ -1.42
ZIC3O60481 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC6.2□□□□□ -1.42
ZIC3O60481 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
ZIC3O60481 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC6.2□□□□□ -1.42
ZIC3O60481 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC6.2□□□□□ -1.42
ZIC3O60481 PARN-201ENST00000341484 2100 ntTSL 2 BASIC6.2□□□□□ -1.42
ZIC3O60481 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ZIC3O60481 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
ZIC3O60481 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
ZIC3O60481 NBPF8-201ENST00000583271 5330 ntBASIC6.2□□□□□ -1.42
ZIC3O60481 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
ZIC3O60481 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC6.2□□□□□ -1.42
ZIC3O60481 UG0898H09-202ENST00000623646 7040 ntBASIC6.2□□□□□ -1.42
ZIC3O60481 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
ZIC3O60481 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
ZIC3O60481 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ZIC3O60481 AL034417.4-202ENST00000642135 2236 ntBASIC6.19□□□□□ -1.42
ZIC3O60481 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
ZIC3O60481 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
ZIC3O60481 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ZIC3O60481 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC6.19□□□□□ -1.42
ZIC3O60481 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
ZIC3O60481 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC6.19□□□□□ -1.42
ZIC3O60481 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
ZIC3O60481 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
ZIC3O60481 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC6.19□□□□□ -1.42
ZIC3O60481 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ZIC3O60481 AC092701.1-201ENST00000623627 1551 ntBASIC6.19□□□□□ -1.42
ZIC3O60481 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms