Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC024267.2-201ENST00000582737 417 ntBASIC6.33□□□□□ -1.4
NPIPA3F8WFD2 MRPL57P3-201ENST00000619218 176 ntBASIC6.33□□□□□ -1.4
NPIPA3F8WFD2 MIR8089-201ENST00000620165 82 ntBASIC6.33□□□□□ -1.4
NPIPA3F8WFD2 TEX41-271ENST00000628213 993 ntTSL 5 BASIC6.33□□□□□ -1.4
NPIPA3F8WFD2 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC6.33□□□□□ -1.4
NPIPA3F8WFD2 DYNC1I2P1-201ENST00000435916 1838 ntBASIC6.33□□□□□ -1.4
NPIPA3F8WFD2 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
NPIPA3F8WFD2 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
NPIPA3F8WFD2 MAK-202ENST00000354489 3941 ntTSL 5 BASIC6.33□□□□□ -1.4
NPIPA3F8WFD2 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
NPIPA3F8WFD2 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
NPIPA3F8WFD2 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC6.33□□□□□ -1.4
NPIPA3F8WFD2 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC6.33□□□□□ -1.4
NPIPA3F8WFD2 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC6.33□□□□□ -1.4
NPIPA3F8WFD2 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
NPIPA3F8WFD2 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC6.33□□□□□ -1.4
NPIPA3F8WFD2 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
NPIPA3F8WFD2 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.33□□□□□ -1.4
NPIPA3F8WFD2 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
NPIPA3F8WFD2 SPATA31C2-201ENST00000324915 3777 ntBASIC6.33□□□□□ -1.4
NPIPA3F8WFD2 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC6.33□□□□□ -1.4
NPIPA3F8WFD2 AC005614.1-201ENST00000598952 3653 ntBASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 PARN-201ENST00000341484 2100 ntTSL 2 BASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 CDY19P-201ENST00000411668 1613 ntBASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 CDY18P-201ENST00000438294 1609 ntBASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 AC034111.1-201ENST00000562143 3770 ntBASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 BLNK-203ENST00000413476 1599 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 AL359715.1-201ENST00000404330 555 ntBASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 VN1R66P-201ENST00000412929 916 ntBASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 AL773545.3-201ENST00000414297 706 ntBASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 AC006509.1-201ENST00000420788 634 ntBASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 LINC01384-201ENST00000422494 659 ntTSL 3 BASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 CYP4F32P-201ENST00000426492 504 ntBASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 AC018804.1-201ENST00000430381 618 ntBASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 RPEP4-201ENST00000437636 602 ntBASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 PPIA-203ENST00000451562 544 ntTSL 2 BASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 AL096803.1-201ENST00000456921 1021 ntBASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 RN7SL502P-201ENST00000481857 290 ntBASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 RPL9P15-201ENST00000491096 532 ntBASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 SNRPCP11-201ENST00000492453 205 ntBASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 AC092349.1-201ENST00000504903 310 ntBASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 IGKV2D-38-201ENST00000518423 240 ntBASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 ASB8-207ENST00000536953 923 ntTSL 2 BASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 AL365223.1-201ENST00000574864 1297 ntBASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 AC096708.2-201ENST00000577676 512 ntBASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 AC007603.3-201ENST00000636915 979 ntBASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 TPTE2P2-201ENST00000403471 1466 ntBASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 AC092646.2-201ENST00000431242 2095 ntBASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
NPIPA3F8WFD2 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NPIPA3F8WFD2 AP002800.1-201ENST00000624982 2225 ntBASIC6.31□□□□□ -1.4
NPIPA3F8WFD2 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NPIPA3F8WFD2 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NPIPA3F8WFD2 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC6.31□□□□□ -1.4
NPIPA3F8WFD2 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NPIPA3F8WFD2 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NPIPA3F8WFD2 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
NPIPA3F8WFD2 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
NPIPA3F8WFD2 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
NPIPA3F8WFD2 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NPIPA3F8WFD2 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.31□□□□□ -1.4
NPIPA3F8WFD2 AC067942.1-201ENST00000488045 1493 ntBASIC6.31□□□□□ -1.4
NPIPA3F8WFD2 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms