Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 AL356317.1-201ENST00000396110 1436 ntBASIC7.12□□□□□ -1.27
HMGB1P1B2RPK0 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
HMGB1P1B2RPK0 RGS5-215ENST00000439699 1441 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
HMGB1P1B2RPK0 C1D-202ENST00000407324 1379 ntTSL 3 BASIC7.12□□□□□ -1.27
HMGB1P1B2RPK0 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC7.12□□□□□ -1.27
HMGB1P1B2RPK0 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
HMGB1P1B2RPK0 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
HMGB1P1B2RPK0 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC7.12□□□□□ -1.27
HMGB1P1B2RPK0 RNA5SP79-201ENST00000365193 109 ntBASIC7.12□□□□□ -1.27
HMGB1P1B2RPK0 GCG-201ENST00000375497 799 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
HMGB1P1B2RPK0 SNORA70H-201ENST00000383910 135 ntBASIC7.12□□□□□ -1.27
HMGB1P1B2RPK0 SNORA70J-201ENST00000384182 135 ntBASIC7.12□□□□□ -1.27
HMGB1P1B2RPK0 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC7.12□□□□□ -1.27
HMGB1P1B2RPK0 VN1R13P-201ENST00000406212 885 ntBASIC7.12□□□□□ -1.27
HMGB1P1B2RPK0 MED20-203ENST00000409060 815 ntTSL 2 BASIC7.12□□□□□ -1.27
HMGB1P1B2RPK0 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC7.12□□□□□ -1.27
HMGB1P1B2RPK0 HSPE1-202ENST00000409468 570 ntTSL 2 BASIC7.12□□□□□ -1.27
HMGB1P1B2RPK0 RPSAP1-201ENST00000421328 880 ntBASIC7.12□□□□□ -1.27
HMGB1P1B2RPK0 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC7.12□□□□□ -1.27
HMGB1P1B2RPK0 AC092162.2-203ENST00000430460 579 ntTSL 4 BASIC7.12□□□□□ -1.27
HMGB1P1B2RPK0 AL353653.1-202ENST00000435177 539 ntTSL 3 BASIC7.12□□□□□ -1.27
HMGB1P1B2RPK0 AL138787.1-202ENST00000437804 898 ntBASIC7.12□□□□□ -1.27
HMGB1P1B2RPK0 LINC01713-201ENST00000445589 932 ntTSL 3 BASIC7.12□□□□□ -1.27
HMGB1P1B2RPK0 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC7.12□□□□□ -1.27
HMGB1P1B2RPK0 LINC00533-201ENST00000456103 537 ntTSL 3 BASIC7.12□□□□□ -1.27
HMGB1P1B2RPK0 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC7.12□□□□□ -1.27
HMGB1P1B2RPK0 AC096743.1-201ENST00000485172 319 ntBASIC7.12□□□□□ -1.27
HMGB1P1B2RPK0 AC117395.1-201ENST00000487390 403 ntBASIC7.12□□□□□ -1.27
HMGB1P1B2RPK0 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC7.12□□□□□ -1.27
HMGB1P1B2RPK0 AC091917.2-201ENST00000505002 744 ntBASIC7.12□□□□□ -1.27
HMGB1P1B2RPK0 HSD17B11-203ENST00000507286 851 ntTSL 5 BASIC7.12□□□□□ -1.27
HMGB1P1B2RPK0 AC133565.1-201ENST00000569218 488 ntTSL 3 BASIC7.12□□□□□ -1.27
HMGB1P1B2RPK0 AC136624.3-201ENST00000571660 567 ntTSL 5 BASIC7.12□□□□□ -1.27
HMGB1P1B2RPK0 AC005410.2-201ENST00000580270 463 ntTSL 3 BASIC7.12□□□□□ -1.27
HMGB1P1B2RPK0 AP001542.1-201ENST00000591314 200 ntBASIC7.12□□□□□ -1.27
HMGB1P1B2RPK0 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
HMGB1P1B2RPK0 LINC01515-207ENST00000598092 496 ntTSL 3 BASIC7.12□□□□□ -1.27
HMGB1P1B2RPK0 AL359704.2-201ENST00000604335 521 ntBASIC7.12□□□□□ -1.27
HMGB1P1B2RPK0 AC073389.3-201ENST00000609434 935 ntBASIC7.12□□□□□ -1.27
HMGB1P1B2RPK0 LINC01697-206ENST00000616647 544 ntTSL 5 BASIC7.12□□□□□ -1.27
HMGB1P1B2RPK0 EAPP-205ENST00000618169 1237 ntTSL 5 BASIC7.12□□□□□ -1.27
HMGB1P1B2RPK0 uc_338.21-201ENST00000622458 147 ntBASIC7.12□□□□□ -1.27
HMGB1P1B2RPK0 AC018659.2-201ENST00000624690 715 ntBASIC7.12□□□□□ -1.27
HMGB1P1B2RPK0 AC068870.3-201ENST00000625077 2536 ntBASIC7.12□□□□□ -1.27
HMGB1P1B2RPK0 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
HMGB1P1B2RPK0 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
HMGB1P1B2RPK0 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
HMGB1P1B2RPK0 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
HMGB1P1B2RPK0 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
HMGB1P1B2RPK0 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HMGB1P1B2RPK0 BTK-209ENST00000618050 2417 ntTSL 5 BASIC7.11□□□□□ -1.27
HMGB1P1B2RPK0 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HMGB1P1B2RPK0 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HMGB1P1B2RPK0 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
HMGB1P1B2RPK0 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC7.11□□□□□ -1.27
HMGB1P1B2RPK0 NOX1-201ENST00000217885 1734 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
HMGB1P1B2RPK0 ZNF658B-201ENST00000602828 3408 ntBASIC7.11□□□□□ -1.27
HMGB1P1B2RPK0 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC7.11□□□□□ -1.27
HMGB1P1B2RPK0 C12orf45-201ENST00000280749 459 ntTSL 3 BASIC7.11□□□□□ -1.27
HMGB1P1B2RPK0 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
HMGB1P1B2RPK0 STAG3L4-201ENST00000352103 530 ntBASIC7.11□□□□□ -1.27
HMGB1P1B2RPK0 RNA5SP238-201ENST00000365464 120 ntBASIC7.11□□□□□ -1.27
HMGB1P1B2RPK0 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC7.11□□□□□ -1.27
HMGB1P1B2RPK0 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
HMGB1P1B2RPK0 AC008770.1-201ENST00000406892 1257 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
HMGB1P1B2RPK0 AC093642.1-201ENST00000412193 565 ntTSL 3 BASIC7.11□□□□□ -1.27
HMGB1P1B2RPK0 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
HMGB1P1B2RPK0 RPL23AP18-201ENST00000416139 468 ntBASIC7.11□□□□□ -1.27
HMGB1P1B2RPK0 AC104455.1-201ENST00000417340 736 ntBASIC7.11□□□□□ -1.27
HMGB1P1B2RPK0 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC7.11□□□□□ -1.27
HMGB1P1B2RPK0 RPL24P8-201ENST00000446071 474 ntBASIC7.11□□□□□ -1.27
HMGB1P1B2RPK0 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC7.11□□□□□ -1.27
HMGB1P1B2RPK0 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC7.11□□□□□ -1.27
HMGB1P1B2RPK0 AC009955.1-201ENST00000455896 271 ntTSL 5 BASIC7.11□□□□□ -1.27
HMGB1P1B2RPK0 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
HMGB1P1B2RPK0 ZNF695-204ENST00000487338 826 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
HMGB1P1B2RPK0 ANKRD55-205ENST00000513241 626 ntTSL 5 BASIC7.11□□□□□ -1.27
HMGB1P1B2RPK0 GAPDHP44-201ENST00000513513 1007 ntBASIC7.11□□□□□ -1.27
HMGB1P1B2RPK0 ADAM20P2-201ENST00000515830 1273 ntBASIC7.11□□□□□ -1.27
HMGB1P1B2RPK0 ANAPC15-211ENST00000542531 812 ntAPPRIS P3 TSL 5 BASIC7.11□□□□□ -1.27
HMGB1P1B2RPK0 ILF2P2-201ENST00000547482 1117 ntBASIC7.11□□□□□ -1.27
HMGB1P1B2RPK0 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC7.11□□□□□ -1.27
HMGB1P1B2RPK0 AC007614.1-201ENST00000566607 309 ntTSL 3 BASIC7.11□□□□□ -1.27
HMGB1P1B2RPK0 DTNA-220ENST00000590831 847 ntTSL 2 BASIC7.11□□□□□ -1.27
HMGB1P1B2RPK0 AC022239.4-201ENST00000602626 504 ntBASIC7.11□□□□□ -1.27
HMGB1P1B2RPK0 Z99916.3-201ENST00000623422 1080 ntBASIC7.11□□□□□ -1.27
HMGB1P1B2RPK0 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC7.11□□□□□ -1.27
HMGB1P1B2RPK0 AC063952.4-201ENST00000634744 825 ntTSL 5 BASIC7.11□□□□□ -1.27
HMGB1P1B2RPK0 AP000356.4-201ENST00000639500 172 ntBASIC7.11□□□□□ -1.27
HMGB1P1B2RPK0 MIR193BHG-210ENST00000641327 515 ntBASIC7.11□□□□□ -1.27
HMGB1P1B2RPK0 AP000547.3-204ENST00000588548 2523 ntBASIC7.11□□□□□ -1.27
HMGB1P1B2RPK0 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC7.11□□□□□ -1.27
HMGB1P1B2RPK0 AL161912.4-201ENST00000623889 2468 ntBASIC7.11□□□□□ -1.27
HMGB1P1B2RPK0 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
HMGB1P1B2RPK0 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
HMGB1P1B2RPK0 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HMGB1P1B2RPK0 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC7.11□□□□□ -1.27
HMGB1P1B2RPK0 NGDN-201ENST00000397154 2204 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
HMGB1P1B2RPK0 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC7.11□□□□□ -1.27
HMGB1P1B2RPK0 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms