Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
PCDH9Q9HC56 AC083806.1-201ENST00000468934 316 ntBASIC7.07□□□□□ -1.28
PCDH9Q9HC56 RPL21P42-201ENST00000488408 464 ntBASIC7.07□□□□□ -1.28
PCDH9Q9HC56 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC7.07□□□□□ -1.28
PCDH9Q9HC56 IGHVIII-25-1-201ENST00000522143 241 ntBASIC7.07□□□□□ -1.28
PCDH9Q9HC56 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC7.07□□□□□ -1.28
PCDH9Q9HC56 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC7.07□□□□□ -1.28
PCDH9Q9HC56 AC007537.1-201ENST00000539347 327 ntBASIC7.07□□□□□ -1.28
PCDH9Q9HC56 DCN-215ENST00000550099 719 ntTSL 2 BASIC7.07□□□□□ -1.28
PCDH9Q9HC56 EIF4A3P1-201ENST00000578499 647 ntBASIC7.07□□□□□ -1.28
PCDH9Q9HC56 RN7SL199P-201ENST00000578752 281 ntBASIC7.07□□□□□ -1.28
PCDH9Q9HC56 RN7SL656P-201ENST00000579044 281 ntBASIC7.07□□□□□ -1.28
PCDH9Q9HC56 RN7SL404P-201ENST00000582421 281 ntBASIC7.07□□□□□ -1.28
PCDH9Q9HC56 AC007255.2-201ENST00000604053 631 ntBASIC7.07□□□□□ -1.28
PCDH9Q9HC56 AC023206.1-201ENST00000605824 298 ntBASIC7.07□□□□□ -1.28
PCDH9Q9HC56 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC7.07□□□□□ -1.28
PCDH9Q9HC56 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC7.07□□□□□ -1.28
PCDH9Q9HC56 AP005212.3-201ENST00000619964 528 ntBASIC7.07□□□□□ -1.28
PCDH9Q9HC56 AC007204.1-201ENST00000621794 555 ntBASIC7.07□□□□□ -1.28
PCDH9Q9HC56 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC7.07□□□□□ -1.28
PCDH9Q9HC56 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
PCDH9Q9HC56 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
PCDH9Q9HC56 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PCDH9Q9HC56 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
PCDH9Q9HC56 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
PCDH9Q9HC56 CDY5P-201ENST00000411487 1580 ntBASIC7.07□□□□□ -1.28
PCDH9Q9HC56 CDY9P-201ENST00000451397 1580 ntBASIC7.07□□□□□ -1.28
PCDH9Q9HC56 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC7.07□□□□□ -1.28
PCDH9Q9HC56 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
PCDH9Q9HC56 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PCDH9Q9HC56 AC016251.2-201ENST00000623393 3089 ntBASIC7.07□□□□□ -1.28
PCDH9Q9HC56 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC7.06□□□□□ -1.28
PCDH9Q9HC56 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
PCDH9Q9HC56 AC112243.1-201ENST00000623949 3851 ntBASIC7.06□□□□□ -1.28
PCDH9Q9HC56 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC7.06□□□□□ -1.28
PCDH9Q9HC56 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC7.06□□□□□ -1.28
PCDH9Q9HC56 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC7.06□□□□□ -1.28
PCDH9Q9HC56 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
PCDH9Q9HC56 CA10-204ENST00000570565 2276 ntTSL 5 BASIC7.06□□□□□ -1.28
PCDH9Q9HC56 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
PCDH9Q9HC56 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
PCDH9Q9HC56 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
PCDH9Q9HC56 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
PCDH9Q9HC56 RNA5SP512-201ENST00000364550 120 ntBASIC7.06□□□□□ -1.28
PCDH9Q9HC56 RNA5SP302-201ENST00000364896 100 ntBASIC7.06□□□□□ -1.28
PCDH9Q9HC56 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
PCDH9Q9HC56 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
PCDH9Q9HC56 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
PCDH9Q9HC56 AL359715.1-201ENST00000404330 555 ntBASIC7.06□□□□□ -1.28
PCDH9Q9HC56 AL035696.2-201ENST00000407941 709 ntBASIC7.06□□□□□ -1.28
PCDH9Q9HC56 RN7SKP137-201ENST00000411074 307 ntBASIC7.06□□□□□ -1.28
PCDH9Q9HC56 PPIAP23-201ENST00000420099 497 ntBASIC7.06□□□□□ -1.28
PCDH9Q9HC56 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC7.06□□□□□ -1.28
PCDH9Q9HC56 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC7.06□□□□□ -1.28
PCDH9Q9HC56 AL121578.1-201ENST00000428051 892 ntBASIC7.06□□□□□ -1.28
PCDH9Q9HC56 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC7.06□□□□□ -1.28
PCDH9Q9HC56 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC7.06□□□□□ -1.28
PCDH9Q9HC56 AC087499.3-202ENST00000441215 1173 ntBASIC7.06□□□□□ -1.28
PCDH9Q9HC56 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC7.06□□□□□ -1.28
PCDH9Q9HC56 AC079193.1-201ENST00000460497 588 ntBASIC7.06□□□□□ -1.28
PCDH9Q9HC56 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC7.06□□□□□ -1.28
PCDH9Q9HC56 AC126615.1-201ENST00000470084 630 ntBASIC7.06□□□□□ -1.28
PCDH9Q9HC56 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC7.06□□□□□ -1.28
PCDH9Q9HC56 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
PCDH9Q9HC56 RN7SL518P-201ENST00000491887 280 ntBASIC7.06□□□□□ -1.28
PCDH9Q9HC56 LINC01182-201ENST00000503532 582 ntTSL 4 BASIC7.06□□□□□ -1.28
PCDH9Q9HC56 DCAF13P2-201ENST00000514188 555 ntBASIC7.06□□□□□ -1.28
PCDH9Q9HC56 AC122713.1-201ENST00000518368 1015 ntBASIC7.06□□□□□ -1.28
PCDH9Q9HC56 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC7.06□□□□□ -1.28
PCDH9Q9HC56 AC087752.2-201ENST00000521219 281 ntBASIC7.06□□□□□ -1.28
PCDH9Q9HC56 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC7.06□□□□□ -1.28
PCDH9Q9HC56 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC7.06□□□□□ -1.28
PCDH9Q9HC56 AP004607.6-201ENST00000525033 1202 ntBASIC7.06□□□□□ -1.28
PCDH9Q9HC56 AC027667.1-201ENST00000545814 304 ntBASIC7.06□□□□□ -1.28
PCDH9Q9HC56 RN7SL657P-201ENST00000582431 293 ntBASIC7.06□□□□□ -1.28
PCDH9Q9HC56 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
PCDH9Q9HC56 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
PCDH9Q9HC56 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC7.06□□□□□ -1.28
PCDH9Q9HC56 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC7.06□□□□□ -1.28
PCDH9Q9HC56 AL445647.2-201ENST00000615170 130 ntBASIC7.06□□□□□ -1.28
PCDH9Q9HC56 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
PCDH9Q9HC56 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
PCDH9Q9HC56 AC068733.2-201ENST00000605434 1418 ntBASIC7.06□□□□□ -1.28
PCDH9Q9HC56 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC7.06□□□□□ -1.28
PCDH9Q9HC56 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
PCDH9Q9HC56 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC7.06□□□□□ -1.28
PCDH9Q9HC56 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
PCDH9Q9HC56 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC7.06□□□□□ -1.28
PCDH9Q9HC56 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
PCDH9Q9HC56 AC096992.2-201ENST00000609553 1684 ntBASIC7.06□□□□□ -1.28
PCDH9Q9HC56 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
PCDH9Q9HC56 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
PCDH9Q9HC56 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
PCDH9Q9HC56 AC007406.5-201ENST00000570140 3170 ntBASIC7.06□□□□□ -1.28
PCDH9Q9HC56 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
PCDH9Q9HC56 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
PCDH9Q9HC56 MELK-211ENST00000545008 2236 ntTSL 2 BASIC7.05□□□□□ -1.28
PCDH9Q9HC56 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
PCDH9Q9HC56 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
PCDH9Q9HC56 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms