Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 MAP4K4-220ENST00000627726 3135 ntTSL 5 BASIC8.11□□□□□ -1.11
CNTNAP3Q9BZ76 PLXDC2-203ENST00000377252 12468 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CNTNAP3Q9BZ76 ZNF507-201ENST00000311921 7638 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CNTNAP3Q9BZ76 SEZ6L-204ENST00000402979 3306 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
CNTNAP3Q9BZ76 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
CNTNAP3Q9BZ76 DIAPH3-202ENST00000377908 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
CNTNAP3Q9BZ76 CU633967.1-204ENST00000624627 1604 ntTSL 2 BASIC8.11□□□□□ -1.11
CNTNAP3Q9BZ76 MEIS1-216ENST00000560281 2773 ntTSL 5 BASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 OXNAD1-207ENST00000606098 2288 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 ALOXE3-202ENST00000380149 3362 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 AC079174.2-201ENST00000611145 2028 ntBASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 PROM1-210ENST00000510224 4006 ntAPPRIS P3 TSL 5 BASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 LUCAT1-203ENST00000513626 2672 ntTSL 2 BASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 NRXN1-212ENST00000412315 2215 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 MICB-204ENST00000538442 2411 ntAPPRIS ALT2 TSL 2 BASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 FGB-201ENST00000302068 1975 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 SRPK1-205ENST00000423325 4357 ntTSL 2 BASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 MLLT3-209ENST00000629733 3264 ntTSL 5 BASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 AC090181.3-201ENST00000624777 1514 ntBASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 CUX1-206ENST00000437600 3031 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 FGF1-204ENST00000378046 2582 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 DENND2A-208ENST00000492720 3614 ntTSL 5 BASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 C4BPB-203ENST00000367078 978 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 Z86062.1-201ENST00000406773 777 ntBASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 IGKV1OR2-3-201ENST00000411475 288 ntBASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 AC098592.1-201ENST00000419352 333 ntBASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 SNX18P14-201ENST00000429308 574 ntBASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 MTCO1P45-201ENST00000431457 267 ntBASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 AL158829.1-201ENST00000449258 478 ntTSL 3 BASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 RPL31P20-201ENST00000449593 360 ntBASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 FGF12-206ENST00000450716 768 ntTSL 5 BASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 RPS20P24-201ENST00000457473 361 ntBASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 AC092943.1-201ENST00000485389 878 ntBASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 AL079303.1-201ENST00000486611 463 ntBASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 NR3C2-208ENST00000512865 3822 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 MAST4-IT1-201ENST00000514241 658 ntBASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 TPT1-AS1-218ENST00000523445 856 ntTSL 5 BASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 CRADD-210ENST00000552033 622 ntTSL 3 BASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 AC087465.1-201ENST00000560574 245 ntBASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 BPTFP1-201ENST00000579209 492 ntBASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 MIR3668-201ENST00000582138 75 ntBASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 MIR3663-201ENST00000583207 97 ntBASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 ABBA01006766.1-201ENST00000584728 294 ntBASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 AC005537.1-202ENST00000585996 666 ntTSL 5 BASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 AC011444.4-201ENST00000586415 418 ntBASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 SIGLEC31P-201ENST00000594237 551 ntBASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 AL020997.3-201ENST00000602843 359 ntBASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 IGKV1OR2-9-201ENST00000603957 287 ntBASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 IGKV1OR2-11-201ENST00000604120 287 ntBASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 AC006270.3-201ENST00000605967 1036 ntBASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 MIR8082-201ENST00000612488 81 ntBASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 MIR6761-201ENST00000617899 72 ntBASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 ETV3-202ENST00000368192 5254 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 GLE1-201ENST00000309971 3321 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 TOP1-201ENST00000361337 3738 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 MIPOL1-211ENST00000556451 2282 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 AC120036.5-201ENST00000528139 2491 ntBASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 CTNNA2-209ENST00000466387 4349 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 PRLR-208ENST00000509140 1610 ntTSL 5 BASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 FGA-202ENST00000403106 2248 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 CAPN3-206ENST00000397163 3228 ntAPPRIS ALT1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 SSBP2-201ENST00000320672 8780 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 HPS4-203ENST00000402105 3562 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 CPEB1-AS1-202ENST00000618020 2994 ntBASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 STYK1-201ENST00000075503 2995 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 GBP4-201ENST00000355754 6127 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 CPA2-201ENST00000222481 1366 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 CALD1-202ENST00000361901 4114 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC8.1□□□□□ -1.11
CNTNAP3Q9BZ76 NFIA-206ENST00000371191 1916 ntTSL 5 BASIC8.09□□□□□ -1.11
CNTNAP3Q9BZ76 CTNND1-205ENST00000399050 6313 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CNTNAP3Q9BZ76 DCP2-208ENST00000515408 8029 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CNTNAP3Q9BZ76 TCF4-224ENST00000564403 2696 ntAPPRIS ALT1 TSL 5 BASIC8.09□□□□□ -1.11
CNTNAP3Q9BZ76 CDH11-202ENST00000394156 6874 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CNTNAP3Q9BZ76 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CNTNAP3Q9BZ76 MCM8-204ENST00000378896 3769 ntAPPRIS P4 TSL 1 (best) BASIC8.09□□□□□ -1.11
CNTNAP3Q9BZ76 STEAP2-206ENST00000394632 2072 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CNTNAP3Q9BZ76 CD59-203ENST00000415002 1878 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
CNTNAP3Q9BZ76 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CNTNAP3Q9BZ76 COPB1-202ENST00000439561 3382 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CNTNAP3Q9BZ76 AL031118.1-201ENST00000607727 2955 ntBASIC8.09□□□□□ -1.11
CNTNAP3Q9BZ76 USP15-202ENST00000312635 2226 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CNTNAP3Q9BZ76 MEF2A-203ENST00000449277 5182 ntTSL 5 BASIC8.09□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms