Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CHMP4CQ96CF2 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC8.41□□□□□ -1.06
CHMP4CQ96CF2 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
CHMP4CQ96CF2 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CHMP4CQ96CF2 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC8.4□□□□□ -1.06
CHMP4CQ96CF2 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC8.4□□□□□ -1.06
CHMP4CQ96CF2 PGRMC2-202ENST00000394276 2858 ntTSL 2 BASIC8.4□□□□□ -1.06
CHMP4CQ96CF2 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC8.4□□□□□ -1.06
CHMP4CQ96CF2 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC8.4□□□□□ -1.06
CHMP4CQ96CF2 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
CHMP4CQ96CF2 MAPK10-323ENST00000641493 3207 ntBASIC8.4□□□□□ -1.06
CHMP4CQ96CF2 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
CHMP4CQ96CF2 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
CHMP4CQ96CF2 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
CHMP4CQ96CF2 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
CHMP4CQ96CF2 HNRNPH1P2-201ENST00000396845 1210 ntBASIC8.4□□□□□ -1.06
CHMP4CQ96CF2 ZNF37CP-201ENST00000406795 241 ntBASIC8.4□□□□□ -1.06
CHMP4CQ96CF2 RN7SKP232-201ENST00000410170 290 ntBASIC8.4□□□□□ -1.06
CHMP4CQ96CF2 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC8.4□□□□□ -1.06
CHMP4CQ96CF2 HCG25-217ENST00000422366 702 ntTSL 3 BASIC8.4□□□□□ -1.06
CHMP4CQ96CF2 HMGN1P6-201ENST00000438508 291 ntBASIC8.4□□□□□ -1.06
CHMP4CQ96CF2 BZW1P1-201ENST00000454901 1240 ntBASIC8.4□□□□□ -1.06
CHMP4CQ96CF2 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC8.4□□□□□ -1.06
CHMP4CQ96CF2 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC8.4□□□□□ -1.06
CHMP4CQ96CF2 RPL23AP8-201ENST00000479812 475 ntBASIC8.4□□□□□ -1.06
CHMP4CQ96CF2 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC8.4□□□□□ -1.06
CHMP4CQ96CF2 RPL21P42-201ENST00000488408 464 ntBASIC8.4□□□□□ -1.06
CHMP4CQ96CF2 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC8.4□□□□□ -1.06
CHMP4CQ96CF2 RNU6-964P-201ENST00000516524 69 ntBASIC8.4□□□□□ -1.06
CHMP4CQ96CF2 RNU4-18P-201ENST00000516751 149 ntBASIC8.4□□□□□ -1.06
CHMP4CQ96CF2 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC8.4□□□□□ -1.06
CHMP4CQ96CF2 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC8.4□□□□□ -1.06
CHMP4CQ96CF2 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC8.4□□□□□ -1.06
CHMP4CQ96CF2 AC105430.1-202ENST00000567477 483 ntTSL 3 BASIC8.4□□□□□ -1.06
CHMP4CQ96CF2 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC8.4□□□□□ -1.06
CHMP4CQ96CF2 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC8.4□□□□□ -1.06
CHMP4CQ96CF2 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC8.4□□□□□ -1.06
CHMP4CQ96CF2 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC8.4□□□□□ -1.06
CHMP4CQ96CF2 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC8.4□□□□□ -1.06
CHMP4CQ96CF2 AL121782.1-201ENST00000611242 413 ntBASIC8.4□□□□□ -1.06
CHMP4CQ96CF2 AC243960.7-201ENST00000623532 707 ntBASIC8.4□□□□□ -1.06
CHMP4CQ96CF2 AC127071.1-201ENST00000624997 712 ntBASIC8.4□□□□□ -1.06
CHMP4CQ96CF2 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC8.4□□□□□ -1.06
CHMP4CQ96CF2 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
CHMP4CQ96CF2 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC8.4□□□□□ -1.06
CHMP4CQ96CF2 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
CHMP4CQ96CF2 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC8.4□□□□□ -1.06
CHMP4CQ96CF2 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
CHMP4CQ96CF2 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC8.4□□□□□ -1.06
CHMP4CQ96CF2 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
CHMP4CQ96CF2 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
CHMP4CQ96CF2 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.07
CHMP4CQ96CF2 AC126474.2-201ENST00000623268 1750 ntBASIC8.4□□□□□ -1.07
CHMP4CQ96CF2 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CHMP4CQ96CF2 AC104837.1-201ENST00000444644 1587 ntBASIC8.39□□□□□ -1.07
CHMP4CQ96CF2 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
CHMP4CQ96CF2 AC099654.3-201ENST00000447087 1546 ntBASIC8.39□□□□□ -1.07
CHMP4CQ96CF2 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC8.39□□□□□ -1.07
CHMP4CQ96CF2 AL356361.1-201ENST00000400943 1459 ntBASIC8.39□□□□□ -1.07
CHMP4CQ96CF2 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC8.39□□□□□ -1.07
CHMP4CQ96CF2 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC8.39□□□□□ -1.07
CHMP4CQ96CF2 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
CHMP4CQ96CF2 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
CHMP4CQ96CF2 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
CHMP4CQ96CF2 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
CHMP4CQ96CF2 SPATA31C1-201ENST00000420021 3895 ntBASIC8.39□□□□□ -1.07
CHMP4CQ96CF2 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CHMP4CQ96CF2 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC8.39□□□□□ -1.07
CHMP4CQ96CF2 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
CHMP4CQ96CF2 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC8.39□□□□□ -1.07
CHMP4CQ96CF2 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC8.39□□□□□ -1.07
CHMP4CQ96CF2 AC007386.1-201ENST00000455212 582 ntBASIC8.39□□□□□ -1.07
CHMP4CQ96CF2 OR7E7P-201ENST00000455678 1012 ntBASIC8.39□□□□□ -1.07
CHMP4CQ96CF2 RPSAP7-201ENST00000456871 885 ntBASIC8.39□□□□□ -1.07
CHMP4CQ96CF2 RN7SL149P-201ENST00000465197 281 ntBASIC8.39□□□□□ -1.07
CHMP4CQ96CF2 RN7SL160P-201ENST00000468558 284 ntBASIC8.39□□□□□ -1.07
CHMP4CQ96CF2 RPS14P8-201ENST00000478778 369 ntBASIC8.39□□□□□ -1.07
CHMP4CQ96CF2 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC8.39□□□□□ -1.07
CHMP4CQ96CF2 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC8.39□□□□□ -1.07
CHMP4CQ96CF2 SUMO2P7-201ENST00000511179 285 ntBASIC8.39□□□□□ -1.07
CHMP4CQ96CF2 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC8.39□□□□□ -1.07
CHMP4CQ96CF2 AC021733.2-201ENST00000518830 497 ntBASIC8.39□□□□□ -1.07
CHMP4CQ96CF2 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC8.39□□□□□ -1.07
CHMP4CQ96CF2 AC025857.1-201ENST00000525252 377 ntBASIC8.39□□□□□ -1.07
CHMP4CQ96CF2 NDUFA3P2-201ENST00000531434 232 ntBASIC8.39□□□□□ -1.07
CHMP4CQ96CF2 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
CHMP4CQ96CF2 LDHC-204ENST00000536880 957 ntTSL 5 BASIC8.39□□□□□ -1.07
CHMP4CQ96CF2 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC8.39□□□□□ -1.07
CHMP4CQ96CF2 DPPA3P2-201ENST00000553589 478 ntBASIC8.39□□□□□ -1.07
CHMP4CQ96CF2 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC8.39□□□□□ -1.07
CHMP4CQ96CF2 AC126323.4-201ENST00000566935 234 ntBASIC8.39□□□□□ -1.07
CHMP4CQ96CF2 FCGR1CP-201ENST00000579737 1127 ntBASIC8.39□□□□□ -1.07
CHMP4CQ96CF2 AC010463.3-201ENST00000594077 500 ntBASIC8.39□□□□□ -1.07
CHMP4CQ96CF2 OR7A8P-201ENST00000595427 913 ntBASIC8.39□□□□□ -1.07
CHMP4CQ96CF2 AC020765.1-201ENST00000604296 328 ntBASIC8.39□□□□□ -1.07
CHMP4CQ96CF2 AC092960.1-201ENST00000604762 351 ntBASIC8.39□□□□□ -1.07
CHMP4CQ96CF2 AF117829.2-201ENST00000619538 361 ntBASIC8.39□□□□□ -1.07
CHMP4CQ96CF2 AC016542.3-201ENST00000623520 619 ntBASIC8.39□□□□□ -1.07
CHMP4CQ96CF2 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC8.39□□□□□ -1.07
CHMP4CQ96CF2 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC8.39□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms