Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC021851.1-201ENST00000608537 1082 ntBASIC7.95□□□□□ -1.14
SHKBP1Q8TBC3 AL139123.1-201ENST00000612008 430 ntBASIC7.95□□□□□ -1.14
SHKBP1Q8TBC3 AC121761.2-201ENST00000617300 689 ntBASIC7.95□□□□□ -1.14
SHKBP1Q8TBC3 AL158062.1-201ENST00000619632 745 ntBASIC7.95□□□□□ -1.14
SHKBP1Q8TBC3 AC129908.1-201ENST00000624553 648 ntBASIC7.95□□□□□ -1.14
SHKBP1Q8TBC3 TEX41-279ENST00000629149 609 ntTSL 5 BASIC7.95□□□□□ -1.14
SHKBP1Q8TBC3 AC003992.1-201ENST00000635364 557 ntBASIC7.95□□□□□ -1.14
SHKBP1Q8TBC3 AC005841.2-201ENST00000637658 1167 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
SHKBP1Q8TBC3 ATXN3-203ENST00000393287 6770 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
SHKBP1Q8TBC3 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
SHKBP1Q8TBC3 C7orf73-202ENST00000507606 2450 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
SHKBP1Q8TBC3 FNDC3B-203ENST00000416957 3684 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
SHKBP1Q8TBC3 PGRMC2-202ENST00000394276 2858 ntTSL 2 BASIC7.95□□□□□ -1.14
SHKBP1Q8TBC3 ZNF10-201ENST00000248211 4441 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
SHKBP1Q8TBC3 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
SHKBP1Q8TBC3 AL357556.1-201ENST00000421884 1388 ntBASIC7.95□□□□□ -1.14
SHKBP1Q8TBC3 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
SHKBP1Q8TBC3 ZFP42-203ENST00000618147 2338 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
SHKBP1Q8TBC3 FOPNL-206ENST00000573968 2039 ntTSL 2 BASIC7.95□□□□□ -1.14
SHKBP1Q8TBC3 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
SHKBP1Q8TBC3 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
SHKBP1Q8TBC3 ACTG2-203ENST00000409731 1413 ntTSL 2 BASIC7.95□□□□□ -1.14
SHKBP1Q8TBC3 SORBS1-208ENST00000371241 2055 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
SHKBP1Q8TBC3 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC7.94□□□□□ -1.14
SHKBP1Q8TBC3 AURKA-208ENST00000395915 2114 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
SHKBP1Q8TBC3 LDAH-208ENST00000435420 3837 ntTSL 2 BASIC7.94□□□□□ -1.14
SHKBP1Q8TBC3 LGSN-202ENST00000370658 5213 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
SHKBP1Q8TBC3 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC7.94□□□□□ -1.14
SHKBP1Q8TBC3 AC073544.1-201ENST00000600110 1595 ntBASIC7.94□□□□□ -1.14
SHKBP1Q8TBC3 FLJ42393-201ENST00000623801 2270 ntBASIC7.94□□□□□ -1.14
SHKBP1Q8TBC3 AC096745.2-201ENST00000627783 1914 ntBASIC7.94□□□□□ -1.14
SHKBP1Q8TBC3 SLC8A3-208ENST00000533541 3409 ntTSL 2 BASIC7.94□□□□□ -1.14
SHKBP1Q8TBC3 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
SHKBP1Q8TBC3 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
SHKBP1Q8TBC3 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC7.94□□□□□ -1.14
SHKBP1Q8TBC3 RNA5SP396-201ENST00000364834 120 ntBASIC7.94□□□□□ -1.14
SHKBP1Q8TBC3 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC7.94□□□□□ -1.14
SHKBP1Q8TBC3 MIR7-1-201ENST00000384871 110 ntBASIC7.94□□□□□ -1.14
SHKBP1Q8TBC3 OLA1P1-201ENST00000396387 1189 ntBASIC7.94□□□□□ -1.14
SHKBP1Q8TBC3 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC7.94□□□□□ -1.14
SHKBP1Q8TBC3 AL139135.1-201ENST00000412675 209 ntBASIC7.94□□□□□ -1.14
SHKBP1Q8TBC3 AL591368.1-202ENST00000413050 548 ntTSL 3 BASIC7.94□□□□□ -1.14
SHKBP1Q8TBC3 PPIAP30-201ENST00000415473 519 ntBASIC7.94□□□□□ -1.14
SHKBP1Q8TBC3 AL512504.1-201ENST00000415494 778 ntBASIC7.94□□□□□ -1.14
SHKBP1Q8TBC3 P2RY10P2-201ENST00000416730 913 ntBASIC7.94□□□□□ -1.14
SHKBP1Q8TBC3 HYALP1-201ENST00000417674 1279 ntBASIC7.94□□□□□ -1.14
SHKBP1Q8TBC3 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
SHKBP1Q8TBC3 AL390023.1-201ENST00000428836 262 ntBASIC7.94□□□□□ -1.14
SHKBP1Q8TBC3 AF127577.3-201ENST00000430391 781 ntTSL 2 BASIC7.94□□□□□ -1.14
SHKBP1Q8TBC3 CR769776.1-201ENST00000441254 787 ntBASIC7.94□□□□□ -1.14
SHKBP1Q8TBC3 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC7.94□□□□□ -1.14
SHKBP1Q8TBC3 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC7.94□□□□□ -1.14
SHKBP1Q8TBC3 TRY2P-201ENST00000448860 689 ntBASIC7.94□□□□□ -1.14
SHKBP1Q8TBC3 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC7.94□□□□□ -1.14
SHKBP1Q8TBC3 NPM1P13-201ENST00000452663 865 ntBASIC7.94□□□□□ -1.14
SHKBP1Q8TBC3 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC7.94□□□□□ -1.14
SHKBP1Q8TBC3 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC7.94□□□□□ -1.14
SHKBP1Q8TBC3 NAP1L1P3-201ENST00000462291 880 ntBASIC7.94□□□□□ -1.14
SHKBP1Q8TBC3 TDGF1P6-201ENST00000463873 448 ntBASIC7.94□□□□□ -1.14
SHKBP1Q8TBC3 TUBBP11-201ENST00000472255 252 ntBASIC7.94□□□□□ -1.14
SHKBP1Q8TBC3 AP001960.1-201ENST00000506494 658 ntBASIC7.94□□□□□ -1.14
SHKBP1Q8TBC3 AC017007.5-201ENST00000511590 874 ntTSL 2 BASIC7.94□□□□□ -1.14
SHKBP1Q8TBC3 AC117532.1-201ENST00000514638 323 ntBASIC7.94□□□□□ -1.14
SHKBP1Q8TBC3 RNA5SP96-201ENST00000516041 107 ntBASIC7.94□□□□□ -1.14
SHKBP1Q8TBC3 RNU6-760P-201ENST00000516078 97 ntBASIC7.94□□□□□ -1.14
SHKBP1Q8TBC3 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC7.94□□□□□ -1.14
SHKBP1Q8TBC3 IGKV3D-31-201ENST00000519131 281 ntBASIC7.94□□□□□ -1.14
SHKBP1Q8TBC3 AC115676.1-201ENST00000538416 329 ntTSL 3 BASIC7.94□□□□□ -1.14
SHKBP1Q8TBC3 AC068631.3-201ENST00000538831 225 ntBASIC7.94□□□□□ -1.14
SHKBP1Q8TBC3 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC7.94□□□□□ -1.14
SHKBP1Q8TBC3 TRIM69-210ENST00000561043 1017 ntTSL 3 BASIC7.94□□□□□ -1.14
SHKBP1Q8TBC3 AC011451.2-201ENST00000604303 598 ntBASIC7.94□□□□□ -1.14
SHKBP1Q8TBC3 AL606760.4-201ENST00000617613 718 ntBASIC7.94□□□□□ -1.14
SHKBP1Q8TBC3 pRNA.9-201ENST00000618609 89 ntBASIC7.94□□□□□ -1.14
SHKBP1Q8TBC3 AK6-205ENST00000618980 483 ntTSL 2 BASIC7.94□□□□□ -1.14
SHKBP1Q8TBC3 AL359715.5-201ENST00000623431 443 ntBASIC7.94□□□□□ -1.14
SHKBP1Q8TBC3 AL356596.1-201ENST00000624230 379 ntBASIC7.94□□□□□ -1.14
SHKBP1Q8TBC3 AC017037.3-201ENST00000625016 472 ntBASIC7.94□□□□□ -1.14
SHKBP1Q8TBC3 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC7.94□□□□□ -1.14
SHKBP1Q8TBC3 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
SHKBP1Q8TBC3 AURKA-203ENST00000371356 2112 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
SHKBP1Q8TBC3 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC7.94□□□□□ -1.14
SHKBP1Q8TBC3 AGR2-203ENST00000419304 1778 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
SHKBP1Q8TBC3 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC7.94□□□□□ -1.14
SHKBP1Q8TBC3 TOPORS-202ENST00000379858 3621 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
SHKBP1Q8TBC3 CYSLTR2-202ENST00000614739 1908 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
SHKBP1Q8TBC3 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC7.93□□□□□ -1.14
SHKBP1Q8TBC3 ZNF226-213ENST00000588883 5972 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
SHKBP1Q8TBC3 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
SHKBP1Q8TBC3 AL022163.1-201ENST00000430261 1569 ntBASIC7.93□□□□□ -1.14
SHKBP1Q8TBC3 ARHGAP42P5-201ENST00000548856 2936 ntBASIC7.93□□□□□ -1.14
SHKBP1Q8TBC3 MRPS31P5-201ENST00000416599 3494 ntTSL 2 BASIC7.93□□□□□ -1.14
SHKBP1Q8TBC3 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
SHKBP1Q8TBC3 ELL2P3-201ENST00000457883 1602 ntBASIC7.93□□□□□ -1.14
SHKBP1Q8TBC3 NLRP8-202ENST00000590542 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
SHKBP1Q8TBC3 AC016251.1-201ENST00000624299 4198 ntBASIC7.93□□□□□ -1.14
SHKBP1Q8TBC3 METTL8-201ENST00000375258 8203 ntTSL 5 BASIC7.93□□□□□ -1.14
SHKBP1Q8TBC3 CCL13-201ENST00000225844 851 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
SHKBP1Q8TBC3 PIP-201ENST00000291009 585 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
SHKBP1Q8TBC3 MIR555-201ENST00000384987 96 ntBASIC7.93□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms