Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC7.34□□□□□ -1.23
NEK3P51956 AC027271.1-201ENST00000610270 610 ntBASIC7.34□□□□□ -1.23
NEK3P51956 ASB8-218ENST00000629941 278 ntTSL 5 BASIC7.34□□□□□ -1.23
NEK3P51956 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC7.34□□□□□ -1.23
NEK3P51956 AL596275.2-203ENST00000641951 371 ntBASIC7.34□□□□□ -1.23
NEK3P51956 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC7.34□□□□□ -1.23
NEK3P51956 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
NEK3P51956 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC7.34□□□□□ -1.23
NEK3P51956 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
NEK3P51956 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
NEK3P51956 AC132219.2-201ENST00000624416 2327 ntBASIC7.34□□□□□ -1.23
NEK3P51956 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC7.34□□□□□ -1.23
NEK3P51956 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
NEK3P51956 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
NEK3P51956 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
NEK3P51956 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC7.34□□□□□ -1.24
NEK3P51956 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
NEK3P51956 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
NEK3P51956 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC7.33□□□□□ -1.24
NEK3P51956 AC005261.2-201ENST00000593427 4258 ntBASIC7.33□□□□□ -1.24
NEK3P51956 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC7.33□□□□□ -1.24
NEK3P51956 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC7.33□□□□□ -1.24
NEK3P51956 MUSK-205ENST00000374448 2754 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
NEK3P51956 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
NEK3P51956 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
NEK3P51956 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
NEK3P51956 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
NEK3P51956 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
NEK3P51956 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC7.33□□□□□ -1.24
NEK3P51956 NRIR-201ENST00000366140 799 ntTSL 3 BASIC7.33□□□□□ -1.24
NEK3P51956 AL593856.1-201ENST00000419949 805 ntBASIC7.33□□□□□ -1.24
NEK3P51956 PPIAP23-201ENST00000420099 497 ntBASIC7.33□□□□□ -1.24
NEK3P51956 AL021707.2-202ENST00000422408 1080 ntTSL 3 BASIC7.33□□□□□ -1.24
NEK3P51956 FABP5P1-201ENST00000423401 411 ntBASIC7.33□□□□□ -1.24
NEK3P51956 RPL14P5-201ENST00000436474 730 ntBASIC7.33□□□□□ -1.24
NEK3P51956 ARPP21-217ENST00000436702 561 ntTSL 4 BASIC7.33□□□□□ -1.24
NEK3P51956 RPS7P4-201ENST00000444127 582 ntBASIC7.33□□□□□ -1.24
NEK3P51956 AL513343.1-201ENST00000451818 792 ntBASIC7.33□□□□□ -1.24
NEK3P51956 NUCKS1P1-201ENST00000452067 703 ntBASIC7.33□□□□□ -1.24
NEK3P51956 TPRKBP1-201ENST00000456243 481 ntBASIC7.33□□□□□ -1.24
NEK3P51956 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC7.33□□□□□ -1.24
NEK3P51956 RN7SL392P-201ENST00000473024 299 ntBASIC7.33□□□□□ -1.24
NEK3P51956 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC7.33□□□□□ -1.24
NEK3P51956 RPS23-208ENST00000512493 443 ntTSL 3 BASIC7.33□□□□□ -1.24
NEK3P51956 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC7.33□□□□□ -1.24
NEK3P51956 AC120036.3-201ENST00000517826 292 ntBASIC7.33□□□□□ -1.24
NEK3P51956 ST13P6-201ENST00000522430 1102 ntBASIC7.33□□□□□ -1.24
NEK3P51956 AP003084.1-201ENST00000524828 742 ntBASIC7.33□□□□□ -1.24
NEK3P51956 OR7E10P-201ENST00000526420 991 ntBASIC7.33□□□□□ -1.24
NEK3P51956 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC7.33□□□□□ -1.24
NEK3P51956 AC019209.3-201ENST00000536949 772 ntTSL 3 BASIC7.33□□□□□ -1.24
NEK3P51956 ETFBKMT-204ENST00000538391 1067 ntTSL 3 BASIC7.33□□□□□ -1.24
NEK3P51956 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC7.33□□□□□ -1.24
NEK3P51956 FCF1-203ENST00000553615 954 ntTSL 3 BASIC7.33□□□□□ -1.24
NEK3P51956 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC7.33□□□□□ -1.24
NEK3P51956 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC7.33□□□□□ -1.24
NEK3P51956 AC007614.3-201ENST00000564875 654 ntTSL 3 BASIC7.33□□□□□ -1.24
NEK3P51956 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC7.33□□□□□ -1.24
NEK3P51956 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC7.33□□□□□ -1.24
NEK3P51956 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC7.33□□□□□ -1.24
NEK3P51956 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC7.33□□□□□ -1.24
NEK3P51956 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC7.33□□□□□ -1.24
NEK3P51956 AL049536.1-202ENST00000623572 455 ntTSL 5 BASIC7.33□□□□□ -1.24
NEK3P51956 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC7.33□□□□□ -1.24
NEK3P51956 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
NEK3P51956 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
NEK3P51956 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
NEK3P51956 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC7.33□□□□□ -1.24
NEK3P51956 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC7.33□□□□□ -1.24
NEK3P51956 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
NEK3P51956 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC7.33□□□□□ -1.24
NEK3P51956 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
NEK3P51956 AC006116.1-201ENST00000587908 2171 ntBASIC7.33□□□□□ -1.24
NEK3P51956 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC7.33□□□□□ -1.24
NEK3P51956 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
NEK3P51956 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
NEK3P51956 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
NEK3P51956 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC7.33□□□□□ -1.24
NEK3P51956 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC7.33□□□□□ -1.24
NEK3P51956 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
NEK3P51956 USP40-202ENST00000409945 1946 ntTSL 2 BASIC7.33□□□□□ -1.24
NEK3P51956 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC7.33□□□□□ -1.24
NEK3P51956 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC7.33□□□□□ -1.24
NEK3P51956 AC005261.6-201ENST00000623072 1387 ntBASIC7.33□□□□□ -1.24
NEK3P51956 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
NEK3P51956 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
NEK3P51956 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
NEK3P51956 AC027279.4-201ENST00000624371 2072 ntBASIC7.32□□□□□ -1.24
NEK3P51956 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC7.32□□□□□ -1.24
NEK3P51956 OR5M2P-202ENST00000641241 4242 ntBASIC7.32□□□□□ -1.24
NEK3P51956 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
NEK3P51956 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
NEK3P51956 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
NEK3P51956 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
NEK3P51956 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
NEK3P51956 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC7.32□□□□□ -1.24
NEK3P51956 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC7.32□□□□□ -1.24
NEK3P51956 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
NEK3P51956 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC7.32□□□□□ -1.24
NEK3P51956 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms