Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 CAST-228ENST00000509903 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
CPS1P31327 ATL3-201ENST00000398868 7135 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
CPS1P31327 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC9.49□□□□□ -0.89
CPS1P31327 CACNA1D-203ENST00000422281 6414 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
CPS1P31327 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
CPS1P31327 NBPF9-202ENST00000584027 5034 ntAPPRIS P2 TSL 5 BASIC9.49□□□□□ -0.89
CPS1P31327 DNAH11-201ENST00000328843 13917 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
CPS1P31327 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC9.49□□□□□ -0.89
CPS1P31327 FRMPD2-201ENST00000305531 4665 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
CPS1P31327 LPIN1-207ENST00000425416 5582 ntTSL 2 BASIC9.49□□□□□ -0.89
CPS1P31327 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
CPS1P31327 AL359694.1-201ENST00000403247 604 ntBASIC9.49□□□□□ -0.89
CPS1P31327 RN7SKP232-201ENST00000410170 290 ntBASIC9.49□□□□□ -0.89
CPS1P31327 HMGN1P6-201ENST00000438508 291 ntBASIC9.49□□□□□ -0.89
CPS1P31327 RBMY3AP-201ENST00000449381 1145 ntBASIC9.49□□□□□ -0.89
CPS1P31327 AC135721.2-201ENST00000464237 300 ntBASIC9.49□□□□□ -0.89
CPS1P31327 RN7SL860P-201ENST00000473738 223 ntBASIC9.49□□□□□ -0.89
CPS1P31327 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC9.49□□□□□ -0.89
CPS1P31327 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC9.49□□□□□ -0.89
CPS1P31327 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC9.49□□□□□ -0.89
CPS1P31327 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC9.49□□□□□ -0.89
CPS1P31327 SDR42E1P1-201ENST00000611327 477 ntBASIC9.49□□□□□ -0.89
CPS1P31327 AL353626.1-201ENST00000613429 507 ntTSL 5 BASIC9.49□□□□□ -0.89
CPS1P31327 WDR75-207ENST00000631047 270 ntTSL 5 BASIC9.49□□□□□ -0.89
CPS1P31327 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC9.49□□□□□ -0.89
CPS1P31327 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC9.49□□□□□ -0.89
CPS1P31327 DDX43P1-201ENST00000510713 1763 ntBASIC9.49□□□□□ -0.89
CPS1P31327 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
CPS1P31327 WDFY2-201ENST00000298125 9321 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
CPS1P31327 RNF152-201ENST00000312828 9501 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
CPS1P31327 ZBTB40-204ENST00000404138 8992 ntAPPRIS P3 TSL 5 BASIC9.49□□□□□ -0.89
CPS1P31327 GALR1-201ENST00000299727 10044 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
CPS1P31327 PBRM1-206ENST00000409114 5015 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
CPS1P31327 IGSF1-206ENST00000370910 4406 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
CPS1P31327 SMG1P5-202ENST00000529428 4219 ntBASIC9.49□□□□□ -0.89
CPS1P31327 SMG1P2-201ENST00000566127 4221 ntBASIC9.49□□□□□ -0.89
CPS1P31327 Z97989.1-201ENST00000531702 2421 ntBASIC9.49□□□□□ -0.89
CPS1P31327 CASC19-246ENST00000641625 1606 ntBASIC9.49□□□□□ -0.89
CPS1P31327 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC9.49□□□□□ -0.89
CPS1P31327 AC005702.3-201ENST00000585345 1447 ntBASIC9.49□□□□□ -0.89
CPS1P31327 FAM13A-218ENST00000511976 3579 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
CPS1P31327 SEMA5A-201ENST00000382496 11762 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
CPS1P31327 AC007066.2-201ENST00000561961 1993 ntTSL 2 BASIC9.48□□□□□ -0.89
CPS1P31327 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
CPS1P31327 RETREG1-202ENST00000399793 3145 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
CPS1P31327 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC9.48□□□□□ -0.89
CPS1P31327 DROSHA-201ENST00000344624 5102 ntAPPRIS P4 TSL 5 BASIC9.48□□□□□ -0.89
CPS1P31327 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC9.48□□□□□ -0.89
CPS1P31327 PPP6C-201ENST00000373547 4118 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
CPS1P31327 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
CPS1P31327 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
CPS1P31327 FUNDC2P3-201ENST00000334716 533 ntBASIC9.48□□□□□ -0.89
CPS1P31327 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
CPS1P31327 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
CPS1P31327 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC9.48□□□□□ -0.89
CPS1P31327 OR2L9P-201ENST00000444456 913 ntBASIC9.48□□□□□ -0.89
CPS1P31327 AC010240.2-201ENST00000445363 1205 ntBASIC9.48□□□□□ -0.89
CPS1P31327 AL034399.1-201ENST00000451535 380 ntBASIC9.48□□□□□ -0.89
CPS1P31327 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC9.48□□□□□ -0.89
CPS1P31327 RN7SL515P-201ENST00000463999 297 ntBASIC9.48□□□□□ -0.89
CPS1P31327 GLRXP3-201ENST00000470810 321 ntBASIC9.48□□□□□ -0.89
CPS1P31327 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC9.48□□□□□ -0.89
CPS1P31327 H3F3AP3-201ENST00000497682 407 ntBASIC9.48□□□□□ -0.89
CPS1P31327 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC9.48□□□□□ -0.89
CPS1P31327 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC9.48□□□□□ -0.89
CPS1P31327 AL162632.2-201ENST00000553933 399 ntBASIC9.48□□□□□ -0.89
CPS1P31327 MIR4489-201ENST00000578869 62 ntBASIC9.48□□□□□ -0.89
CPS1P31327 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC9.48□□□□□ -0.89
CPS1P31327 AC111186.1-201ENST00000604684 130 ntBASIC9.48□□□□□ -0.89
CPS1P31327 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC9.48□□□□□ -0.89
CPS1P31327 DLG1-208ENST00000419354 3994 ntAPPRIS ALT1 TSL 1 (best) BASIC9.48□□□□□ -0.89
CPS1P31327 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC9.48□□□□□ -0.89
CPS1P31327 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC9.48□□□□□ -0.89
CPS1P31327 MET-202ENST00000397752 6635 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
CPS1P31327 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
CPS1P31327 FAM26E-201ENST00000368599 9784 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
CPS1P31327 SPATS2L-201ENST00000358677 6156 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
CPS1P31327 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
CPS1P31327 FRMPD2-213ENST00000636244 4194 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
CPS1P31327 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
CPS1P31327 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC9.47□□□□□ -0.89
CPS1P31327 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC9.47□□□□□ -0.89
CPS1P31327 RN7SKP292-201ENST00000365522 317 ntBASIC9.47□□□□□ -0.89
CPS1P31327 LYRM7-201ENST00000379380 6351 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CPS1P31327 MIR105-2-201ENST00000385083 81 ntBASIC9.47□□□□□ -0.89
CPS1P31327 AL391361.1-201ENST00000405580 489 ntBASIC9.47□□□□□ -0.89
CPS1P31327 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
CPS1P31327 OR52H2P-201ENST00000514607 902 ntBASIC9.47□□□□□ -0.89
CPS1P31327 AC087855.2-201ENST00000518217 537 ntTSL 3 BASIC9.47□□□□□ -0.89
CPS1P31327 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC9.47□□□□□ -0.89
CPS1P31327 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC9.47□□□□□ -0.89
CPS1P31327 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC9.47□□□□□ -0.89
CPS1P31327 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC9.47□□□□□ -0.89
CPS1P31327 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC9.47□□□□□ -0.89
CPS1P31327 AC009237.12-201ENST00000604755 742 ntBASIC9.47□□□□□ -0.89
CPS1P31327 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC9.47□□□□□ -0.89
CPS1P31327 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC9.47□□□□□ -0.89
CPS1P31327 AC073488.2-201ENST00000631903 751 ntBASIC9.47□□□□□ -0.89
CPS1P31327 AL049767.1-202ENST00000637826 242 ntBASIC9.47□□□□□ -0.89
CPS1P31327 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC9.47□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms