Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 AC022296.2-201ENST00000512424 202 ntBASIC8.16□□□□□ -1.1
CNGA1P29973 STX18-IT1-201ENST00000515487 542 ntTSL 4 BASIC8.16□□□□□ -1.1
CNGA1P29973 RN7SKP233-201ENST00000517005 110 ntBASIC8.16□□□□□ -1.1
CNGA1P29973 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC8.16□□□□□ -1.1
CNGA1P29973 CASC11-203ENST00000519071 791 ntTSL 3 BASIC8.16□□□□□ -1.1
CNGA1P29973 IGHVIII-26-1-201ENST00000520387 250 ntBASIC8.16□□□□□ -1.1
CNGA1P29973 AC024341.1-201ENST00000526444 1552 ntBASIC8.16□□□□□ -1.1
CNGA1P29973 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC8.16□□□□□ -1.1
CNGA1P29973 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CNGA1P29973 AL356800.1-201ENST00000553339 735 ntBASIC8.16□□□□□ -1.1
CNGA1P29973 AC116903.1-201ENST00000557683 539 ntTSL 4 BASIC8.16□□□□□ -1.1
CNGA1P29973 OR4N3P-201ENST00000559395 818 ntBASIC8.16□□□□□ -1.1
CNGA1P29973 ULK4P2-202ENST00000564187 492 ntBASIC8.16□□□□□ -1.1
CNGA1P29973 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CNGA1P29973 AC092142.1-202ENST00000567021 829 ntTSL 5 BASIC8.16□□□□□ -1.1
CNGA1P29973 RN7SL667P-201ENST00000582817 298 ntBASIC8.16□□□□□ -1.1
CNGA1P29973 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC8.16□□□□□ -1.1
CNGA1P29973 AC097376.1-201ENST00000602907 997 ntBASIC8.16□□□□□ -1.1
CNGA1P29973 AL390877.1-201ENST00000605704 214 ntBASIC8.16□□□□□ -1.1
CNGA1P29973 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC8.16□□□□□ -1.1
CNGA1P29973 AC008833.1-201ENST00000611633 691 ntBASIC8.16□□□□□ -1.1
CNGA1P29973 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
CNGA1P29973 CXADRP3-202ENST00000617265 1100 ntBASIC8.16□□□□□ -1.1
CNGA1P29973 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC8.16□□□□□ -1.1
CNGA1P29973 AC135068.4-201ENST00000622949 925 ntBASIC8.16□□□□□ -1.1
CNGA1P29973 AC020763.5-201ENST00000623298 430 ntBASIC8.16□□□□□ -1.1
CNGA1P29973 AC090181.3-201ENST00000624777 1514 ntBASIC8.16□□□□□ -1.1
CNGA1P29973 MAPK10-379ENST00000642013 1385 ntBASIC8.16□□□□□ -1.1
CNGA1P29973 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CNGA1P29973 COL6A4P1-202ENST00000487147 4317 ntBASIC8.16□□□□□ -1.1
CNGA1P29973 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC8.16□□□□□ -1.1
CNGA1P29973 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC8.16□□□□□ -1.1
CNGA1P29973 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC8.16□□□□□ -1.1
CNGA1P29973 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CNGA1P29973 Z99129.4-201ENST00000624649 2435 ntBASIC8.15□□□□□ -1.1
CNGA1P29973 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC8.15□□□□□ -1.1
CNGA1P29973 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
CNGA1P29973 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
CNGA1P29973 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CNGA1P29973 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
CNGA1P29973 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
CNGA1P29973 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC8.15□□□□□ -1.1
CNGA1P29973 AL451064.2-201ENST00000623514 1654 ntBASIC8.15□□□□□ -1.1
CNGA1P29973 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
CNGA1P29973 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC8.15□□□□□ -1.1
CNGA1P29973 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
CNGA1P29973 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC8.15□□□□□ -1.1
CNGA1P29973 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CNGA1P29973 SNORA68-201ENST00000384437 133 ntBASIC8.15□□□□□ -1.1
CNGA1P29973 AL050305.1-201ENST00000399993 1230 ntBASIC8.15□□□□□ -1.1
CNGA1P29973 VN1R12P-201ENST00000403778 876 ntBASIC8.15□□□□□ -1.1
CNGA1P29973 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
CNGA1P29973 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC8.15□□□□□ -1.1
CNGA1P29973 AL356806.1-201ENST00000422524 916 ntBASIC8.15□□□□□ -1.1
CNGA1P29973 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC8.15□□□□□ -1.1
CNGA1P29973 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC8.15□□□□□ -1.1
CNGA1P29973 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC8.15□□□□□ -1.1
CNGA1P29973 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC8.15□□□□□ -1.1
CNGA1P29973 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC8.15□□□□□ -1.1
CNGA1P29973 AP003385.3-201ENST00000472498 287 ntBASIC8.15□□□□□ -1.1
CNGA1P29973 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CNGA1P29973 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC8.15□□□□□ -1.1
CNGA1P29973 OR5F2P-201ENST00000532761 941 ntBASIC8.15□□□□□ -1.1
CNGA1P29973 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC8.15□□□□□ -1.1
CNGA1P29973 AC107958.1-201ENST00000556576 290 ntBASIC8.15□□□□□ -1.1
CNGA1P29973 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC8.15□□□□□ -1.1
CNGA1P29973 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC8.15□□□□□ -1.1
CNGA1P29973 NPM1P45-201ENST00000583151 559 ntBASIC8.15□□□□□ -1.1
CNGA1P29973 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC8.15□□□□□ -1.1
CNGA1P29973 AC016747.2-203ENST00000606876 289 ntTSL 3 BASIC8.15□□□□□ -1.1
CNGA1P29973 RAB28P4-201ENST00000622233 665 ntBASIC8.15□□□□□ -1.1
CNGA1P29973 AC130448.2-201ENST00000624082 374 ntBASIC8.15□□□□□ -1.1
CNGA1P29973 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC8.15□□□□□ -1.1
CNGA1P29973 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC8.15□□□□□ -1.1
CNGA1P29973 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC8.15□□□□□ -1.1
CNGA1P29973 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CNGA1P29973 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
CNGA1P29973 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.11
CNGA1P29973 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
CNGA1P29973 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
CNGA1P29973 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
CNGA1P29973 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC8.15□□□□□ -1.11
CNGA1P29973 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC8.15□□□□□ -1.11
CNGA1P29973 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
CNGA1P29973 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
CNGA1P29973 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
CNGA1P29973 LRRC37A12P-201ENST00000454917 1801 ntBASIC8.15□□□□□ -1.11
CNGA1P29973 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.11
CNGA1P29973 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC8.14□□□□□ -1.11
CNGA1P29973 PAH-201ENST00000307000 2466 ntTSL 5 BASIC8.14□□□□□ -1.11
CNGA1P29973 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CNGA1P29973 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
CNGA1P29973 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CNGA1P29973 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC8.14□□□□□ -1.11
CNGA1P29973 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC8.14□□□□□ -1.11
CNGA1P29973 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
CNGA1P29973 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CNGA1P29973 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC8.14□□□□□ -1.11
CNGA1P29973 AL391262.1-201ENST00000556558 1992 ntBASIC8.14□□□□□ -1.11
CNGA1P29973 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms