Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SCN2BO60939 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SCN2BO60939 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC6.48□□□□□ -1.37
SCN2BO60939 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.48□□□□□ -1.37
SCN2BO60939 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC6.48□□□□□ -1.37
SCN2BO60939 RPL29P7-201ENST00000440227 457 ntBASIC6.48□□□□□ -1.37
SCN2BO60939 AC087499.3-202ENST00000441215 1173 ntBASIC6.48□□□□□ -1.37
SCN2BO60939 CRYGGP-201ENST00000443337 145 ntBASIC6.48□□□□□ -1.37
SCN2BO60939 RPL6P24-201ENST00000445338 864 ntBASIC6.48□□□□□ -1.37
SCN2BO60939 LINC01961-201ENST00000449954 745 ntTSL 5 BASIC6.48□□□□□ -1.37
SCN2BO60939 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC6.48□□□□□ -1.37
SCN2BO60939 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC6.48□□□□□ -1.37
SCN2BO60939 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC6.48□□□□□ -1.37
SCN2BO60939 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC6.48□□□□□ -1.37
SCN2BO60939 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC6.48□□□□□ -1.37
SCN2BO60939 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.48□□□□□ -1.37
SCN2BO60939 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
SCN2BO60939 SNURF-202ENST00000577949 650 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
SCN2BO60939 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC6.48□□□□□ -1.37
SCN2BO60939 AC008734.1-201ENST00000594006 537 ntTSL 2 BASIC6.48□□□□□ -1.37
SCN2BO60939 AC020914.7-201ENST00000594477 545 ntBASIC6.48□□□□□ -1.37
SCN2BO60939 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
SCN2BO60939 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.48□□□□□ -1.37
SCN2BO60939 AC007255.2-201ENST00000604053 631 ntBASIC6.48□□□□□ -1.37
SCN2BO60939 AC005070.2-201ENST00000604391 260 ntBASIC6.48□□□□□ -1.37
SCN2BO60939 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC6.48□□□□□ -1.37
SCN2BO60939 AC025287.2-201ENST00000621911 668 ntBASIC6.48□□□□□ -1.37
SCN2BO60939 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC6.48□□□□□ -1.37
SCN2BO60939 AC102941.1-201ENST00000567616 1537 ntBASIC6.48□□□□□ -1.37
SCN2BO60939 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.48□□□□□ -1.37
SCN2BO60939 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC6.48□□□□□ -1.37
SCN2BO60939 AC022905.1-201ENST00000503430 3048 ntBASIC6.48□□□□□ -1.37
SCN2BO60939 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
SCN2BO60939 AL136531.3-201ENST00000624378 3658 ntBASIC6.48□□□□□ -1.37
SCN2BO60939 CDY5P-201ENST00000411487 1580 ntBASIC6.48□□□□□ -1.37
SCN2BO60939 ATP5BP1-201ENST00000411980 1574 ntBASIC6.48□□□□□ -1.37
SCN2BO60939 CDY9P-201ENST00000451397 1580 ntBASIC6.48□□□□□ -1.37
SCN2BO60939 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC6.48□□□□□ -1.37
SCN2BO60939 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SCN2BO60939 AC097717.1-227ENST00000594069 1322 ntTSL 5 BASIC6.48□□□□□ -1.37
SCN2BO60939 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SCN2BO60939 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SCN2BO60939 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
SCN2BO60939 AC009120.2-204ENST00000621548 2032 ntBASIC6.47□□□□□ -1.37
SCN2BO60939 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SCN2BO60939 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SCN2BO60939 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
SCN2BO60939 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SCN2BO60939 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC6.47□□□□□ -1.37
SCN2BO60939 BRD7P1-201ENST00000557705 1915 ntBASIC6.47□□□□□ -1.37
SCN2BO60939 SFTPD-AS1-201ENST00000608229 5001 ntBASIC6.47□□□□□ -1.37
SCN2BO60939 AC007485.2-201ENST00000623493 1667 ntBASIC6.47□□□□□ -1.37
SCN2BO60939 RN7SKP1-201ENST00000365525 307 ntBASIC6.47□□□□□ -1.37
SCN2BO60939 NUDT5-202ENST00000378937 919 ntTSL 3 BASIC6.47□□□□□ -1.37
SCN2BO60939 AL645936.2-201ENST00000430565 928 ntBASIC6.47□□□□□ -1.37
SCN2BO60939 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SCN2BO60939 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SCN2BO60939 PCMTD1P3-201ENST00000451824 472 ntBASIC6.47□□□□□ -1.37
SCN2BO60939 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SCN2BO60939 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC6.47□□□□□ -1.37
SCN2BO60939 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC6.47□□□□□ -1.37
SCN2BO60939 TECRP2-201ENST00000503270 928 ntBASIC6.47□□□□□ -1.37
SCN2BO60939 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC6.47□□□□□ -1.37
SCN2BO60939 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC6.47□□□□□ -1.37
SCN2BO60939 AC073581.1-201ENST00000519036 575 ntBASIC6.47□□□□□ -1.37
SCN2BO60939 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.47□□□□□ -1.37
SCN2BO60939 AC026979.2-201ENST00000523733 583 ntTSL 5 BASIC6.47□□□□□ -1.37
SCN2BO60939 NDUFA3P2-201ENST00000531434 232 ntBASIC6.47□□□□□ -1.37
SCN2BO60939 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SCN2BO60939 AC022405.1-201ENST00000559841 516 ntTSL 3 BASIC6.47□□□□□ -1.37
SCN2BO60939 AC004232.1-201ENST00000571388 208 ntBASIC6.47□□□□□ -1.37
SCN2BO60939 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC6.47□□□□□ -1.37
SCN2BO60939 CTSLP2-201ENST00000580501 394 ntBASIC6.47□□□□□ -1.37
SCN2BO60939 C17orf80-208ENST00000582793 531 ntTSL 2 BASIC6.47□□□□□ -1.37
SCN2BO60939 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC6.47□□□□□ -1.37
SCN2BO60939 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SCN2BO60939 MIR6737-201ENST00000617385 70 ntBASIC6.47□□□□□ -1.37
SCN2BO60939 pRNA.9-201ENST00000618609 89 ntBASIC6.47□□□□□ -1.37
SCN2BO60939 CCDC196-207ENST00000636229 1107 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
SCN2BO60939 AC087269.2-201ENST00000641764 975 ntBASIC6.47□□□□□ -1.37
SCN2BO60939 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SCN2BO60939 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.47□□□□□ -1.37
SCN2BO60939 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
SCN2BO60939 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
SCN2BO60939 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
SCN2BO60939 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SCN2BO60939 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SCN2BO60939 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
SCN2BO60939 AL512329.1-201ENST00000404600 1592 ntBASIC6.47□□□□□ -1.37
SCN2BO60939 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SCN2BO60939 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.47□□□□□ -1.37
SCN2BO60939 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.47□□□□□ -1.37
SCN2BO60939 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SCN2BO60939 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.47□□□□□ -1.37
SCN2BO60939 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
SCN2BO60939 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
SCN2BO60939 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC6.47□□□□□ -1.37
SCN2BO60939 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SCN2BO60939 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.46□□□□□ -1.37
SCN2BO60939 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms