Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 TFP1-203ENST00000490470 561 ntTSL 4 BASIC6.22□□□□□ -1.41
ZIC3O60481 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
ZIC3O60481 AC147055.1-201ENST00000509261 750 ntBASIC6.22□□□□□ -1.41
ZIC3O60481 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC6.22□□□□□ -1.41
ZIC3O60481 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC6.22□□□□□ -1.41
ZIC3O60481 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC6.22□□□□□ -1.41
ZIC3O60481 AC078878.1-201ENST00000539832 958 ntBASIC6.22□□□□□ -1.41
ZIC3O60481 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC6.22□□□□□ -1.41
ZIC3O60481 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC6.22□□□□□ -1.41
ZIC3O60481 AC010287.1-201ENST00000566916 357 ntBASIC6.22□□□□□ -1.41
ZIC3O60481 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC6.22□□□□□ -1.41
ZIC3O60481 AC087575.1-201ENST00000585087 229 ntBASIC6.22□□□□□ -1.41
ZIC3O60481 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC6.22□□□□□ -1.41
ZIC3O60481 AC004908.1-201ENST00000606572 541 ntBASIC6.22□□□□□ -1.41
ZIC3O60481 AC239803.2-201ENST00000610161 430 ntBASIC6.22□□□□□ -1.41
ZIC3O60481 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
ZIC3O60481 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC6.22□□□□□ -1.41
ZIC3O60481 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC6.22□□□□□ -1.41
ZIC3O60481 AC006213.4-201ENST00000616184 634 ntBASIC6.22□□□□□ -1.41
ZIC3O60481 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
ZIC3O60481 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
ZIC3O60481 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC6.22□□□□□ -1.41
ZIC3O60481 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC6.22□□□□□ -1.41
ZIC3O60481 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
ZIC3O60481 SPATA31C1-201ENST00000420021 3895 ntBASIC6.22□□□□□ -1.41
ZIC3O60481 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC6.22□□□□□ -1.41
ZIC3O60481 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
ZIC3O60481 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
ZIC3O60481 OR5M2P-202ENST00000641241 4242 ntBASIC6.22□□□□□ -1.41
ZIC3O60481 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
ZIC3O60481 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC6.22□□□□□ -1.41
ZIC3O60481 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
ZIC3O60481 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
ZIC3O60481 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
ZIC3O60481 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
ZIC3O60481 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC6.22□□□□□ -1.41
ZIC3O60481 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC6.22□□□□□ -1.41
ZIC3O60481 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
ZIC3O60481 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
ZIC3O60481 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC6.21□□□□□ -1.41
ZIC3O60481 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.41
ZIC3O60481 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC6.21□□□□□ -1.41
ZIC3O60481 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC6.21□□□□□ -1.41
ZIC3O60481 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.41
ZIC3O60481 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC6.21□□□□□ -1.41
ZIC3O60481 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
ZIC3O60481 DZANK1-203ENST00000357236 3739 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
ZIC3O60481 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC6.21□□□□□ -1.41
ZIC3O60481 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC6.21□□□□□ -1.42
ZIC3O60481 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
ZIC3O60481 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC6.21□□□□□ -1.42
ZIC3O60481 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
ZIC3O60481 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC6.21□□□□□ -1.42
ZIC3O60481 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.42
ZIC3O60481 AC135068.1-201ENST00000332663 1084 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
ZIC3O60481 SNORA70G-201ENST00000383923 142 ntBASIC6.21□□□□□ -1.42
ZIC3O60481 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.42
ZIC3O60481 AL079341.1-201ENST00000404701 1207 ntBASIC6.21□□□□□ -1.42
ZIC3O60481 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC6.21□□□□□ -1.42
ZIC3O60481 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC6.21□□□□□ -1.42
ZIC3O60481 AL672212.1-201ENST00000422246 400 ntBASIC6.21□□□□□ -1.42
ZIC3O60481 BX119904.3-201ENST00000428194 957 ntBASIC6.21□□□□□ -1.42
ZIC3O60481 E2F6P1-201ENST00000428850 745 ntBASIC6.21□□□□□ -1.42
ZIC3O60481 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC6.21□□□□□ -1.42
ZIC3O60481 RPL3P11-201ENST00000434028 1146 ntBASIC6.21□□□□□ -1.42
ZIC3O60481 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC6.21□□□□□ -1.42
ZIC3O60481 HMGN1P32-201ENST00000441744 256 ntBASIC6.21□□□□□ -1.42
ZIC3O60481 IGKV1OR10-1-201ENST00000442306 329 ntBASIC6.21□□□□□ -1.42
ZIC3O60481 AC017099.1-201ENST00000448261 1028 ntBASIC6.21□□□□□ -1.42
ZIC3O60481 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC6.21□□□□□ -1.42
ZIC3O60481 IGKV1OR22-5-201ENST00000458718 354 ntBASIC6.21□□□□□ -1.42
ZIC3O60481 RPSAP24-201ENST00000461543 873 ntBASIC6.21□□□□□ -1.42
ZIC3O60481 AC021074.2-201ENST00000468434 172 ntBASIC6.21□□□□□ -1.42
ZIC3O60481 RN7SL259P-201ENST00000478499 253 ntBASIC6.21□□□□□ -1.42
ZIC3O60481 OR52A4P-202ENST00000481634 799 ntBASIC6.21□□□□□ -1.42
ZIC3O60481 RN7SL267P-201ENST00000485107 261 ntBASIC6.21□□□□□ -1.42
ZIC3O60481 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC6.21□□□□□ -1.42
ZIC3O60481 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC6.21□□□□□ -1.42
ZIC3O60481 AP005902.2-201ENST00000518393 307 ntBASIC6.21□□□□□ -1.42
ZIC3O60481 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC6.21□□□□□ -1.42
ZIC3O60481 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC6.21□□□□□ -1.42
ZIC3O60481 AP004607.6-201ENST00000525033 1202 ntBASIC6.21□□□□□ -1.42
ZIC3O60481 AC025857.1-201ENST00000525252 377 ntBASIC6.21□□□□□ -1.42
ZIC3O60481 AP006587.5-201ENST00000532033 739 ntBASIC6.21□□□□□ -1.42
ZIC3O60481 ACER3-213ENST00000533873 929 ntTSL 2 BASIC6.21□□□□□ -1.42
ZIC3O60481 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
ZIC3O60481 SNRPGP1-201ENST00000553864 222 ntBASIC6.21□□□□□ -1.42
ZIC3O60481 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC6.21□□□□□ -1.42
ZIC3O60481 GTF2IP6-201ENST00000583143 541 ntBASIC6.21□□□□□ -1.42
ZIC3O60481 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC6.21□□□□□ -1.42
ZIC3O60481 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC6.21□□□□□ -1.42
ZIC3O60481 IGKV2OR2-7-201ENST00000604652 304 ntBASIC6.21□□□□□ -1.42
ZIC3O60481 AC012467.1-201ENST00000607740 256 ntBASIC6.21□□□□□ -1.42
ZIC3O60481 U91328.4-201ENST00000608919 517 ntBASIC6.21□□□□□ -1.42
ZIC3O60481 Six3os1_1.1-201ENST00000620900 87 ntBASIC6.21□□□□□ -1.42
ZIC3O60481 AL353684.1-201ENST00000622677 1120 ntBASIC6.21□□□□□ -1.42
ZIC3O60481 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC6.21□□□□□ -1.42
ZIC3O60481 AC106782.7-201ENST00000624024 418 ntBASIC6.21□□□□□ -1.42
ZIC3O60481 AC133555.5-201ENST00000624430 418 ntBASIC6.21□□□□□ -1.42
ZIC3O60481 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 157.9 ms