Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC6.83□□□□□ -1.32
VMP1Q96GC9 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
VMP1Q96GC9 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.83□□□□□ -1.32
VMP1Q96GC9 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
VMP1Q96GC9 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.83□□□□□ -1.32
VMP1Q96GC9 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
VMP1Q96GC9 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
VMP1Q96GC9 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC6.83□□□□□ -1.32
VMP1Q96GC9 AL450426.1-201ENST00000635678 1602 ntTSL 5 BASIC6.83□□□□□ -1.32
VMP1Q96GC9 LINC01994-201ENST00000496220 1808 ntTSL 2 BASIC6.83□□□□□ -1.32
VMP1Q96GC9 EEF1A1P26-201ENST00000458319 1363 ntBASIC6.82□□□□□ -1.32
VMP1Q96GC9 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
VMP1Q96GC9 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.82□□□□□ -1.32
VMP1Q96GC9 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC6.82□□□□□ -1.32
VMP1Q96GC9 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
VMP1Q96GC9 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
VMP1Q96GC9 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC6.82□□□□□ -1.32
VMP1Q96GC9 KLHL8-203ENST00000498875 5175 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
VMP1Q96GC9 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
VMP1Q96GC9 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
VMP1Q96GC9 AC112243.1-201ENST00000623949 3851 ntBASIC6.82□□□□□ -1.32
VMP1Q96GC9 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
VMP1Q96GC9 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC6.82□□□□□ -1.32
VMP1Q96GC9 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
VMP1Q96GC9 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC6.82□□□□□ -1.32
VMP1Q96GC9 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
VMP1Q96GC9 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
VMP1Q96GC9 CENPN-204ENST00000428963 971 ntTSL 2 BASIC6.82□□□□□ -1.32
VMP1Q96GC9 AC073900.1-201ENST00000429766 776 ntBASIC6.82□□□□□ -1.32
VMP1Q96GC9 AL161722.1-201ENST00000446972 1032 ntBASIC6.82□□□□□ -1.32
VMP1Q96GC9 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
VMP1Q96GC9 AC040975.1-201ENST00000472104 316 ntBASIC6.82□□□□□ -1.32
VMP1Q96GC9 OSTC-204ENST00000512478 663 ntTSL 5 BASIC6.82□□□□□ -1.32
VMP1Q96GC9 AC105202.1-203ENST00000518024 875 ntTSL 3 BASIC6.82□□□□□ -1.32
VMP1Q96GC9 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC6.82□□□□□ -1.32
VMP1Q96GC9 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC6.82□□□□□ -1.32
VMP1Q96GC9 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC6.82□□□□□ -1.32
VMP1Q96GC9 AL117192.1-204ENST00000553485 449 ntTSL 2 BASIC6.82□□□□□ -1.32
VMP1Q96GC9 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
VMP1Q96GC9 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC6.82□□□□□ -1.32
VMP1Q96GC9 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC6.82□□□□□ -1.32
VMP1Q96GC9 RN7SL178P-201ENST00000582930 304 ntBASIC6.82□□□□□ -1.32
VMP1Q96GC9 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC6.82□□□□□ -1.32
VMP1Q96GC9 AC009950.1-209ENST00000595586 777 ntTSL 5 BASIC6.82□□□□□ -1.32
VMP1Q96GC9 AC012640.3-201ENST00000607847 430 ntBASIC6.82□□□□□ -1.32
VMP1Q96GC9 PFKM-232ENST00000629846 381 ntTSL 4 BASIC6.82□□□□□ -1.32
VMP1Q96GC9 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
VMP1Q96GC9 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
VMP1Q96GC9 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
VMP1Q96GC9 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
VMP1Q96GC9 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.82□□□□□ -1.32
VMP1Q96GC9 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
VMP1Q96GC9 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
VMP1Q96GC9 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
VMP1Q96GC9 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC6.82□□□□□ -1.32
VMP1Q96GC9 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
VMP1Q96GC9 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
VMP1Q96GC9 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC6.82□□□□□ -1.32
VMP1Q96GC9 ZNF101P1-201ENST00000435701 1720 ntBASIC6.81□□□□□ -1.32
VMP1Q96GC9 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC6.81□□□□□ -1.32
VMP1Q96GC9 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
VMP1Q96GC9 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.81□□□□□ -1.32
VMP1Q96GC9 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
VMP1Q96GC9 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
VMP1Q96GC9 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
VMP1Q96GC9 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
VMP1Q96GC9 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
VMP1Q96GC9 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC6.81□□□□□ -1.32
VMP1Q96GC9 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.81□□□□□ -1.32
VMP1Q96GC9 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
VMP1Q96GC9 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.81□□□□□ -1.32
VMP1Q96GC9 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
VMP1Q96GC9 MIPEPP2-201ENST00000422560 1819 ntBASIC6.81□□□□□ -1.32
VMP1Q96GC9 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
VMP1Q96GC9 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
VMP1Q96GC9 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC6.81□□□□□ -1.32
VMP1Q96GC9 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
VMP1Q96GC9 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
VMP1Q96GC9 OR4A16-201ENST00000314721 1081 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
VMP1Q96GC9 RPL10P16-201ENST00000325000 645 ntBASIC6.81□□□□□ -1.32
VMP1Q96GC9 KRTAP19-6-201ENST00000334046 330 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
VMP1Q96GC9 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
VMP1Q96GC9 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.81□□□□□ -1.32
VMP1Q96GC9 RN7SKP174-201ENST00000363803 330 ntBASIC6.81□□□□□ -1.32
VMP1Q96GC9 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
VMP1Q96GC9 AL158070.1-201ENST00000421614 631 ntTSL 2 BASIC6.81□□□□□ -1.32
VMP1Q96GC9 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC6.81□□□□□ -1.32
VMP1Q96GC9 EEF1A1P27-201ENST00000429983 1135 ntBASIC6.81□□□□□ -1.32
VMP1Q96GC9 AC091390.2-201ENST00000432573 374 ntBASIC6.81□□□□□ -1.32
VMP1Q96GC9 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
VMP1Q96GC9 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
VMP1Q96GC9 VN1R6P-201ENST00000458417 907 ntBASIC6.81□□□□□ -1.32
VMP1Q96GC9 SNORA35.1-201ENST00000458908 128 ntBASIC6.81□□□□□ -1.32
VMP1Q96GC9 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC6.81□□□□□ -1.32
VMP1Q96GC9 AC068522.1-201ENST00000482895 345 ntBASIC6.81□□□□□ -1.32
VMP1Q96GC9 AC012123.2-201ENST00000485809 248 ntBASIC6.81□□□□□ -1.32
VMP1Q96GC9 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC6.81□□□□□ -1.32
VMP1Q96GC9 KCTD9P6-201ENST00000522306 950 ntBASIC6.81□□□□□ -1.32
VMP1Q96GC9 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
VMP1Q96GC9 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms