Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
ZNF549Q6P9A3 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC6.79□□□□□ -1.32
ZNF549Q6P9A3 AC007255.2-201ENST00000604053 631 ntBASIC6.79□□□□□ -1.32
ZNF549Q6P9A3 AL121782.1-201ENST00000611242 413 ntBASIC6.79□□□□□ -1.32
ZNF549Q6P9A3 AL109620.1-201ENST00000618738 1197 ntBASIC6.79□□□□□ -1.32
ZNF549Q6P9A3 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC6.79□□□□□ -1.32
ZNF549Q6P9A3 AL034408.1-201ENST00000637712 664 ntBASIC6.79□□□□□ -1.32
ZNF549Q6P9A3 CXCR2-201ENST00000318507 2879 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
ZNF549Q6P9A3 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
ZNF549Q6P9A3 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
ZNF549Q6P9A3 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
ZNF549Q6P9A3 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
ZNF549Q6P9A3 AC083806.2-201ENST00000617795 2685 ntBASIC6.79□□□□□ -1.32
ZNF549Q6P9A3 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
ZNF549Q6P9A3 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
ZNF549Q6P9A3 AURKA-205ENST00000395911 2145 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
ZNF549Q6P9A3 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
ZNF549Q6P9A3 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
ZNF549Q6P9A3 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC6.78□□□□□ -1.32
ZNF549Q6P9A3 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.78□□□□□ -1.32
ZNF549Q6P9A3 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
ZNF549Q6P9A3 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
ZNF549Q6P9A3 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
ZNF549Q6P9A3 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
ZNF549Q6P9A3 AC104162.1-201ENST00000430831 2382 ntBASIC6.78□□□□□ -1.32
ZNF549Q6P9A3 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
ZNF549Q6P9A3 FKBP1A-203ENST00000381724 976 ntTSL 2 BASIC6.78□□□□□ -1.32
ZNF549Q6P9A3 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
ZNF549Q6P9A3 PDCL3P5-201ENST00000398028 722 ntBASIC6.78□□□□□ -1.32
ZNF549Q6P9A3 AL662791.3-201ENST00000413771 776 ntBASIC6.78□□□□□ -1.32
ZNF549Q6P9A3 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
ZNF549Q6P9A3 GRPEL2P2-201ENST00000421856 670 ntBASIC6.78□□□□□ -1.32
ZNF549Q6P9A3 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
ZNF549Q6P9A3 AC011742.2-201ENST00000443818 352 ntBASIC6.78□□□□□ -1.32
ZNF549Q6P9A3 GOT2P2-201ENST00000450663 1251 ntBASIC6.78□□□□□ -1.32
ZNF549Q6P9A3 MEF2AP1-201ENST00000454867 863 ntBASIC6.78□□□□□ -1.32
ZNF549Q6P9A3 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC6.78□□□□□ -1.32
ZNF549Q6P9A3 AL135933.1-201ENST00000498657 802 ntBASIC6.78□□□□□ -1.32
ZNF549Q6P9A3 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC6.78□□□□□ -1.32
ZNF549Q6P9A3 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC6.78□□□□□ -1.32
ZNF549Q6P9A3 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC6.78□□□□□ -1.32
ZNF549Q6P9A3 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
ZNF549Q6P9A3 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC6.78□□□□□ -1.32
ZNF549Q6P9A3 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC6.78□□□□□ -1.32
ZNF549Q6P9A3 MIR4428-201ENST00000584884 73 ntBASIC6.78□□□□□ -1.32
ZNF549Q6P9A3 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC6.78□□□□□ -1.32
ZNF549Q6P9A3 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC6.78□□□□□ -1.32
ZNF549Q6P9A3 AC139493.1-201ENST00000604368 397 ntBASIC6.78□□□□□ -1.32
ZNF549Q6P9A3 AL034374.2-201ENST00000605281 548 ntBASIC6.78□□□□□ -1.32
ZNF549Q6P9A3 AC004908.1-201ENST00000606572 541 ntBASIC6.78□□□□□ -1.32
ZNF549Q6P9A3 AC091768.1-201ENST00000609258 930 ntBASIC6.78□□□□□ -1.32
ZNF549Q6P9A3 5S_rRNA.23-201ENST00000612086 102 ntBASIC6.78□□□□□ -1.32
ZNF549Q6P9A3 Six3os1_1.1-201ENST00000620900 87 ntBASIC6.78□□□□□ -1.32
ZNF549Q6P9A3 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC6.78□□□□□ -1.32
ZNF549Q6P9A3 SNORA16A-202ENST00000628458 135 ntBASIC6.78□□□□□ -1.32
ZNF549Q6P9A3 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
ZNF549Q6P9A3 AL596244.1-201ENST00000567068 3779 ntBASIC6.78□□□□□ -1.32
ZNF549Q6P9A3 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC6.78□□□□□ -1.32
ZNF549Q6P9A3 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
ZNF549Q6P9A3 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
ZNF549Q6P9A3 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
ZNF549Q6P9A3 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
ZNF549Q6P9A3 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
ZNF549Q6P9A3 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
ZNF549Q6P9A3 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.78□□□□□ -1.32
ZNF549Q6P9A3 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
ZNF549Q6P9A3 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.78□□□□□ -1.32
ZNF549Q6P9A3 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
ZNF549Q6P9A3 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
ZNF549Q6P9A3 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
ZNF549Q6P9A3 GOT2P1-201ENST00000440922 1309 ntBASIC6.77□□□□□ -1.32
ZNF549Q6P9A3 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC6.77□□□□□ -1.33
ZNF549Q6P9A3 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.33
ZNF549Q6P9A3 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
ZNF549Q6P9A3 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
ZNF549Q6P9A3 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
ZNF549Q6P9A3 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
ZNF549Q6P9A3 RNU12-2P-201ENST00000364789 156 ntBASIC6.77□□□□□ -1.33
ZNF549Q6P9A3 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
ZNF549Q6P9A3 MRPS33-202ENST00000393008 853 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
ZNF549Q6P9A3 RN7SKP30-201ENST00000411373 334 ntBASIC6.77□□□□□ -1.33
ZNF549Q6P9A3 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
ZNF549Q6P9A3 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC6.77□□□□□ -1.33
ZNF549Q6P9A3 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
ZNF549Q6P9A3 SNRPEP5-201ENST00000425442 278 ntBASIC6.77□□□□□ -1.33
ZNF549Q6P9A3 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
ZNF549Q6P9A3 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
ZNF549Q6P9A3 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC6.77□□□□□ -1.33
ZNF549Q6P9A3 MYL6P3-201ENST00000436904 432 ntBASIC6.77□□□□□ -1.33
ZNF549Q6P9A3 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC6.77□□□□□ -1.33
ZNF549Q6P9A3 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
ZNF549Q6P9A3 DPP10-AS1-202ENST00000448663 644 ntTSL 3 BASIC6.77□□□□□ -1.33
ZNF549Q6P9A3 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
ZNF549Q6P9A3 RN7SL187P-201ENST00000495587 303 ntBASIC6.77□□□□□ -1.33
ZNF549Q6P9A3 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC6.77□□□□□ -1.33
ZNF549Q6P9A3 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC6.77□□□□□ -1.33
ZNF549Q6P9A3 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC6.77□□□□□ -1.33
ZNF549Q6P9A3 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC6.77□□□□□ -1.33
ZNF549Q6P9A3 DCN-215ENST00000550099 719 ntTSL 2 BASIC6.77□□□□□ -1.33
ZNF549Q6P9A3 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 162.1 ms