Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 OGFOD1P1-201ENST00000447552 1592 ntBASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
H3F3CQ6NXT2 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.43□□□□□ -1.38
H3F3CQ6NXT2 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
H3F3CQ6NXT2 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
H3F3CQ6NXT2 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
H3F3CQ6NXT2 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
H3F3CQ6NXT2 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
H3F3CQ6NXT2 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC6.43□□□□□ -1.38
H3F3CQ6NXT2 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
H3F3CQ6NXT2 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
H3F3CQ6NXT2 RN7SKP189-201ENST00000365042 330 ntBASIC6.43□□□□□ -1.38
H3F3CQ6NXT2 RNA5SP172-201ENST00000365061 118 ntBASIC6.43□□□□□ -1.38
H3F3CQ6NXT2 NRIR-201ENST00000366140 799 ntTSL 3 BASIC6.43□□□□□ -1.38
H3F3CQ6NXT2 AC092634.1-201ENST00000366505 199 ntBASIC6.43□□□□□ -1.38
H3F3CQ6NXT2 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
H3F3CQ6NXT2 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC6.43□□□□□ -1.38
H3F3CQ6NXT2 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC6.43□□□□□ -1.38
H3F3CQ6NXT2 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC6.43□□□□□ -1.38
H3F3CQ6NXT2 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
H3F3CQ6NXT2 AC064862.5-201ENST00000440618 334 ntBASIC6.43□□□□□ -1.38
H3F3CQ6NXT2 UBQLN1P1-207ENST00000441056 1169 ntBASIC6.43□□□□□ -1.38
H3F3CQ6NXT2 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC6.43□□□□□ -1.38
H3F3CQ6NXT2 RPS7P11-201ENST00000484240 586 ntBASIC6.43□□□□□ -1.38
H3F3CQ6NXT2 RPL9P15-201ENST00000491096 532 ntBASIC6.43□□□□□ -1.38
H3F3CQ6NXT2 AC055733.3-201ENST00000505214 523 ntBASIC6.43□□□□□ -1.38
H3F3CQ6NXT2 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC6.43□□□□□ -1.38
H3F3CQ6NXT2 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC6.43□□□□□ -1.38
H3F3CQ6NXT2 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC6.43□□□□□ -1.38
H3F3CQ6NXT2 MIR378C-201ENST00000578683 81 ntBASIC6.43□□□□□ -1.38
H3F3CQ6NXT2 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC6.43□□□□□ -1.38
H3F3CQ6NXT2 AC005479.3-201ENST00000602790 431 ntBASIC6.43□□□□□ -1.38
H3F3CQ6NXT2 AC007255.2-201ENST00000604053 631 ntBASIC6.43□□□□□ -1.38
H3F3CQ6NXT2 PCA3_2.1-201ENST00000612507 409 ntBASIC6.43□□□□□ -1.38
H3F3CQ6NXT2 MIR6849-201ENST00000618543 69 ntBASIC6.43□□□□□ -1.38
H3F3CQ6NXT2 AC073857.1-201ENST00000625082 1054 ntBASIC6.43□□□□□ -1.38
H3F3CQ6NXT2 MBD5-221ENST00000637159 902 ntTSL 5 BASIC6.43□□□□□ -1.38
H3F3CQ6NXT2 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC6.43□□□□□ -1.38
H3F3CQ6NXT2 AL596275.2-203ENST00000641951 371 ntBASIC6.43□□□□□ -1.38
H3F3CQ6NXT2 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
H3F3CQ6NXT2 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
H3F3CQ6NXT2 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC6.43□□□□□ -1.38
H3F3CQ6NXT2 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC6.43□□□□□ -1.38
H3F3CQ6NXT2 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC6.43□□□□□ -1.38
H3F3CQ6NXT2 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC6.43□□□□□ -1.38
H3F3CQ6NXT2 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
H3F3CQ6NXT2 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
H3F3CQ6NXT2 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
H3F3CQ6NXT2 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
H3F3CQ6NXT2 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
H3F3CQ6NXT2 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 AL121949.2-201ENST00000403446 1548 ntBASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 GMFG-201ENST00000253054 616 ntTSL 5 BASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 RN7SKP130-201ENST00000364924 301 ntBASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 AC026310.1-201ENST00000396004 378 ntBASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 SPATA20P1-201ENST00000423089 438 ntBASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 GSTA6P-201ENST00000424144 582 ntBASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 HMGN1P6-201ENST00000438508 291 ntBASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 AC234771.4-201ENST00000441416 730 ntBASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 NPM1P9-201ENST00000453156 844 ntBASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 RN7SL390P-201ENST00000470634 284 ntBASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 SNRPCP11-201ENST00000492453 205 ntBASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 AC114324.2-202ENST00000503812 134 ntBASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 NREP-217ENST00000509025 987 ntTSL 3 BASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 MTCYBP44-201ENST00000514835 823 ntBASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 NREP-223ENST00000515855 801 ntTSL 4 BASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 RNA5SP278-201ENST00000517055 102 ntBASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms