Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
PDS5AQ29RF7 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
PDS5AQ29RF7 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
PDS5AQ29RF7 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC8.17□□□□□ -1.1
PDS5AQ29RF7 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC8.17□□□□□ -1.1
PDS5AQ29RF7 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC8.17□□□□□ -1.1
PDS5AQ29RF7 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
PDS5AQ29RF7 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC8.17□□□□□ -1.1
PDS5AQ29RF7 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
PDS5AQ29RF7 MRPS21P5-201ENST00000417885 231 ntBASIC8.17□□□□□ -1.1
PDS5AQ29RF7 BMP6P1-201ENST00000431230 679 ntBASIC8.17□□□□□ -1.1
PDS5AQ29RF7 CLNS1AP1-201ENST00000435954 682 ntBASIC8.17□□□□□ -1.1
PDS5AQ29RF7 AC096632.2-201ENST00000438139 1239 ntBASIC8.17□□□□□ -1.1
PDS5AQ29RF7 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC8.17□□□□□ -1.1
PDS5AQ29RF7 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
PDS5AQ29RF7 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC8.17□□□□□ -1.1
PDS5AQ29RF7 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC8.17□□□□□ -1.1
PDS5AQ29RF7 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC8.17□□□□□ -1.1
PDS5AQ29RF7 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC8.17□□□□□ -1.1
PDS5AQ29RF7 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC8.17□□□□□ -1.1
PDS5AQ29RF7 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC8.17□□□□□ -1.1
PDS5AQ29RF7 AC025283.1-201ENST00000572039 734 ntBASIC8.17□□□□□ -1.1
PDS5AQ29RF7 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC8.17□□□□□ -1.1
PDS5AQ29RF7 AL008582.1-201ENST00000609612 442 ntBASIC8.17□□□□□ -1.1
PDS5AQ29RF7 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC8.17□□□□□ -1.1
PDS5AQ29RF7 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC8.17□□□□□ -1.1
PDS5AQ29RF7 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
PDS5AQ29RF7 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
PDS5AQ29RF7 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
PDS5AQ29RF7 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
PDS5AQ29RF7 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
PDS5AQ29RF7 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC8.17□□□□□ -1.1
PDS5AQ29RF7 PSMC1P4-201ENST00000515236 1327 ntBASIC8.17□□□□□ -1.1
PDS5AQ29RF7 AP003119.3-201ENST00000566747 4192 ntBASIC8.17□□□□□ -1.1
PDS5AQ29RF7 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC8.17□□□□□ -1.1
PDS5AQ29RF7 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
PDS5AQ29RF7 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC8.17□□□□□ -1.1
PDS5AQ29RF7 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
PDS5AQ29RF7 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
PDS5AQ29RF7 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
PDS5AQ29RF7 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC8.16□□□□□ -1.1
PDS5AQ29RF7 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
PDS5AQ29RF7 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC8.16□□□□□ -1.1
PDS5AQ29RF7 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
PDS5AQ29RF7 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC8.16□□□□□ -1.1
PDS5AQ29RF7 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
PDS5AQ29RF7 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
PDS5AQ29RF7 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC8.16□□□□□ -1.1
PDS5AQ29RF7 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC8.16□□□□□ -1.1
PDS5AQ29RF7 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
PDS5AQ29RF7 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC8.16□□□□□ -1.1
PDS5AQ29RF7 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC8.16□□□□□ -1.1
PDS5AQ29RF7 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
PDS5AQ29RF7 AC121334.1-201ENST00000396414 802 ntBASIC8.16□□□□□ -1.1
PDS5AQ29RF7 AC099535.1-201ENST00000408928 371 ntBASIC8.16□□□□□ -1.1
PDS5AQ29RF7 HNRNPA1P30-201ENST00000424329 751 ntTSL 3 BASIC8.16□□□□□ -1.1
PDS5AQ29RF7 SUMO2P8-201ENST00000434672 286 ntBASIC8.16□□□□□ -1.1
PDS5AQ29RF7 RPS7P10-201ENST00000464254 603 ntBASIC8.16□□□□□ -1.1
PDS5AQ29RF7 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC8.16□□□□□ -1.1
PDS5AQ29RF7 AC093870.1-201ENST00000506837 213 ntBASIC8.16□□□□□ -1.1
PDS5AQ29RF7 AC007106.1-201ENST00000509666 600 ntTSL 4 BASIC8.16□□□□□ -1.1
PDS5AQ29RF7 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC8.16□□□□□ -1.1
PDS5AQ29RF7 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC8.16□□□□□ -1.1
PDS5AQ29RF7 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC8.16□□□□□ -1.1
PDS5AQ29RF7 MIR212-201ENST00000586026 110 ntBASIC8.16□□□□□ -1.1
PDS5AQ29RF7 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
PDS5AQ29RF7 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
PDS5AQ29RF7 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
PDS5AQ29RF7 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
PDS5AQ29RF7 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
PDS5AQ29RF7 PARN-201ENST00000341484 2100 ntTSL 2 BASIC8.16□□□□□ -1.1
PDS5AQ29RF7 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC8.16□□□□□ -1.1
PDS5AQ29RF7 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
PDS5AQ29RF7 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC8.16□□□□□ -1.1
PDS5AQ29RF7 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
PDS5AQ29RF7 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
PDS5AQ29RF7 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC8.15□□□□□ -1.1
PDS5AQ29RF7 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
PDS5AQ29RF7 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
PDS5AQ29RF7 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC8.15□□□□□ -1.1
PDS5AQ29RF7 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
PDS5AQ29RF7 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
PDS5AQ29RF7 RMST-210ENST00000640149 2844 ntTSL 5 BASIC8.15□□□□□ -1.1
PDS5AQ29RF7 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
PDS5AQ29RF7 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
PDS5AQ29RF7 OR7A2P-201ENST00000304105 930 ntBASIC8.15□□□□□ -1.1
PDS5AQ29RF7 PPIAP24-201ENST00000328558 471 ntBASIC8.15□□□□□ -1.1
PDS5AQ29RF7 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC8.15□□□□□ -1.1
PDS5AQ29RF7 OR6R1P-201ENST00000431838 940 ntBASIC8.15□□□□□ -1.1
PDS5AQ29RF7 MORF4L1P5-201ENST00000433352 961 ntBASIC8.15□□□□□ -1.1
PDS5AQ29RF7 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC8.15□□□□□ -1.1
PDS5AQ29RF7 AC092106.2-201ENST00000436597 487 ntBASIC8.15□□□□□ -1.1
PDS5AQ29RF7 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC8.15□□□□□ -1.1
PDS5AQ29RF7 LAPTM4BP1-201ENST00000447781 690 ntBASIC8.15□□□□□ -1.1
PDS5AQ29RF7 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
PDS5AQ29RF7 RN7SL382P-201ENST00000482631 282 ntBASIC8.15□□□□□ -1.1
PDS5AQ29RF7 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC8.15□□□□□ -1.1
PDS5AQ29RF7 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC8.15□□□□□ -1.1
PDS5AQ29RF7 AC106785.4-201ENST00000569492 412 ntBASIC8.15□□□□□ -1.1
PDS5AQ29RF7 WBP1LP11-201ENST00000586141 328 ntBASIC8.15□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 351.7 ms