Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
RHBDL3P58872 NRIR-201ENST00000366140 799 ntTSL 3 BASIC8.2□□□□□ -1.1
RHBDL3P58872 NOX1-203ENST00000372964 661 ntTSL 2 BASIC8.2□□□□□ -1.1
RHBDL3P58872 RN7SKP62-201ENST00000384539 329 ntBASIC8.2□□□□□ -1.1
RHBDL3P58872 AC019178.1-201ENST00000392337 440 ntBASIC8.2□□□□□ -1.1
RHBDL3P58872 GGA1-205ENST00000405147 575 ntTSL 4 BASIC8.2□□□□□ -1.1
RHBDL3P58872 AL133260.1-201ENST00000405720 405 ntBASIC8.2□□□□□ -1.1
RHBDL3P58872 RN7SKP232-201ENST00000410170 290 ntBASIC8.2□□□□□ -1.1
RHBDL3P58872 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC8.2□□□□□ -1.1
RHBDL3P58872 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC8.2□□□□□ -1.1
RHBDL3P58872 RPL7AP51-201ENST00000422016 760 ntBASIC8.2□□□□□ -1.1
RHBDL3P58872 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC8.2□□□□□ -1.1
RHBDL3P58872 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
RHBDL3P58872 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC8.2□□□□□ -1.1
RHBDL3P58872 AC092601.1-201ENST00000444526 383 ntBASIC8.2□□□□□ -1.1
RHBDL3P58872 OR52I1-201ENST00000450052 1050 ntBASIC8.2□□□□□ -1.1
RHBDL3P58872 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC8.2□□□□□ -1.1
RHBDL3P58872 MEF2AP1-201ENST00000454867 863 ntBASIC8.2□□□□□ -1.1
RHBDL3P58872 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC8.2□□□□□ -1.1
RHBDL3P58872 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC8.2□□□□□ -1.1
RHBDL3P58872 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC8.2□□□□□ -1.1
RHBDL3P58872 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC8.2□□□□□ -1.1
RHBDL3P58872 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
RHBDL3P58872 AC021146.11-201ENST00000503319 491 ntBASIC8.2□□□□□ -1.1
RHBDL3P58872 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC8.2□□□□□ -1.1
RHBDL3P58872 RN7SKP5-201ENST00000517045 272 ntBASIC8.2□□□□□ -1.1
RHBDL3P58872 OR4A21P-201ENST00000532759 944 ntBASIC8.2□□□□□ -1.1
RHBDL3P58872 AC023827.2-201ENST00000566880 1061 ntBASIC8.2□□□□□ -1.1
RHBDL3P58872 KCNMA1-AS1-204ENST00000595702 504 ntTSL 5 BASIC8.2□□□□□ -1.1
RHBDL3P58872 AC004908.1-201ENST00000606572 541 ntBASIC8.2□□□□□ -1.1
RHBDL3P58872 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC8.2□□□□□ -1.1
RHBDL3P58872 AL008582.1-201ENST00000609612 442 ntBASIC8.2□□□□□ -1.1
RHBDL3P58872 AP005329.3-201ENST00000609924 686 ntBASIC8.2□□□□□ -1.1
RHBDL3P58872 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC8.2□□□□□ -1.1
RHBDL3P58872 CASC19-232ENST00000641480 1244 ntBASIC8.2□□□□□ -1.1
RHBDL3P58872 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC8.2□□□□□ -1.1
RHBDL3P58872 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
RHBDL3P58872 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
RHBDL3P58872 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC8.2□□□□□ -1.1
RHBDL3P58872 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
RHBDL3P58872 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
RHBDL3P58872 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
RHBDL3P58872 HELB-201ENST00000247815 12866 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
RHBDL3P58872 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
RHBDL3P58872 PHIP-201ENST00000275034 10460 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
RHBDL3P58872 MYCBP2-201ENST00000357337 14736 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
RHBDL3P58872 PLXDC2-203ENST00000377252 12468 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
RHBDL3P58872 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC8.19□□□□□ -1.1
RHBDL3P58872 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC8.19□□□□□ -1.1
RHBDL3P58872 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC8.19□□□□□ -1.1
RHBDL3P58872 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
RHBDL3P58872 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC8.19□□□□□ -1.1
RHBDL3P58872 OR7A2P-201ENST00000304105 930 ntBASIC8.19□□□□□ -1.1
RHBDL3P58872 RNA5SP85-201ENST00000365378 119 ntBASIC8.19□□□□□ -1.1
RHBDL3P58872 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC8.19□□□□□ -1.1
RHBDL3P58872 AL590762.1-201ENST00000391782 432 ntBASIC8.19□□□□□ -1.1
RHBDL3P58872 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC8.19□□□□□ -1.1
RHBDL3P58872 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC8.19□□□□□ -1.1
RHBDL3P58872 RN7SKP38-201ENST00000410782 309 ntBASIC8.19□□□□□ -1.1
RHBDL3P58872 RN7SKP188-201ENST00000410789 317 ntBASIC8.19□□□□□ -1.1
RHBDL3P58872 RNU2-18P-201ENST00000411224 162 ntBASIC8.19□□□□□ -1.1
RHBDL3P58872 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC8.19□□□□□ -1.1
RHBDL3P58872 HNRNPA1P30-201ENST00000424329 751 ntTSL 3 BASIC8.19□□□□□ -1.1
RHBDL3P58872 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC8.19□□□□□ -1.1
RHBDL3P58872 ATP6V1G1P4-201ENST00000438388 335 ntBASIC8.19□□□□□ -1.1
RHBDL3P58872 HBG2-204ENST00000444587 307 ntTSL 2 BASIC8.19□□□□□ -1.1
RHBDL3P58872 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC8.19□□□□□ -1.1
RHBDL3P58872 AL034399.1-201ENST00000451535 380 ntBASIC8.19□□□□□ -1.1
RHBDL3P58872 AC135721.2-201ENST00000464237 300 ntBASIC8.19□□□□□ -1.1
RHBDL3P58872 AC115223.1-201ENST00000466377 870 ntBASIC8.19□□□□□ -1.1
RHBDL3P58872 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC8.19□□□□□ -1.1
RHBDL3P58872 PRICKLE2-AS2-201ENST00000484703 496 ntTSL 3 BASIC8.19□□□□□ -1.1
RHBDL3P58872 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RHBDL3P58872 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RHBDL3P58872 AP001960.1-201ENST00000506494 658 ntBASIC8.19□□□□□ -1.1
RHBDL3P58872 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC8.19□□□□□ -1.1
RHBDL3P58872 AC253576.1-201ENST00000511645 1156 ntBASIC8.19□□□□□ -1.1
RHBDL3P58872 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC8.19□□□□□ -1.1
RHBDL3P58872 RNA5SP318-201ENST00000516352 92 ntBASIC8.19□□□□□ -1.1
RHBDL3P58872 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC8.19□□□□□ -1.1
RHBDL3P58872 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC8.19□□□□□ -1.1
RHBDL3P58872 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC8.19□□□□□ -1.1
RHBDL3P58872 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC8.19□□□□□ -1.1
RHBDL3P58872 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
RHBDL3P58872 AC135626.1-201ENST00000556983 435 ntBASIC8.19□□□□□ -1.1
RHBDL3P58872 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
RHBDL3P58872 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC8.19□□□□□ -1.1
RHBDL3P58872 MIR212-201ENST00000586026 110 ntBASIC8.19□□□□□ -1.1
RHBDL3P58872 DIMT1P1-201ENST00000603970 763 ntBASIC8.19□□□□□ -1.1
RHBDL3P58872 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC8.19□□□□□ -1.1
RHBDL3P58872 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RHBDL3P58872 AL596275.2-203ENST00000641951 371 ntBASIC8.19□□□□□ -1.1
RHBDL3P58872 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
RHBDL3P58872 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC8.19□□□□□ -1.1
RHBDL3P58872 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RHBDL3P58872 MAPK10-379ENST00000642013 1385 ntBASIC8.19□□□□□ -1.1
RHBDL3P58872 UTY-209ENST00000537580 6490 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RHBDL3P58872 FAM135B-204ENST00000395297 6962 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
RHBDL3P58872 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RHBDL3P58872 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms