Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 ARSFP1-201ENST00000398758 477 ntBASIC6.36□□□□□ -1.39
NPIPA3F8WFD2 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC6.36□□□□□ -1.39
NPIPA3F8WFD2 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC6.36□□□□□ -1.39
NPIPA3F8WFD2 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC6.36□□□□□ -1.39
NPIPA3F8WFD2 AL121578.1-201ENST00000428051 892 ntBASIC6.36□□□□□ -1.39
NPIPA3F8WFD2 BX119917.1-201ENST00000432517 502 ntBASIC6.36□□□□□ -1.39
NPIPA3F8WFD2 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC6.36□□□□□ -1.39
NPIPA3F8WFD2 RN7SL492P-201ENST00000460700 295 ntBASIC6.36□□□□□ -1.39
NPIPA3F8WFD2 EIF4E2P2-201ENST00000492033 736 ntBASIC6.36□□□□□ -1.39
NPIPA3F8WFD2 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
NPIPA3F8WFD2 SCARNA6-201ENST00000515982 265 ntBASIC6.36□□□□□ -1.39
NPIPA3F8WFD2 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC6.36□□□□□ -1.39
NPIPA3F8WFD2 EIF4EP5-201ENST00000528228 640 ntBASIC6.36□□□□□ -1.39
NPIPA3F8WFD2 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC6.36□□□□□ -1.39
NPIPA3F8WFD2 ETFBKMT-204ENST00000538391 1067 ntTSL 3 BASIC6.36□□□□□ -1.39
NPIPA3F8WFD2 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC6.36□□□□□ -1.39
NPIPA3F8WFD2 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC6.36□□□□□ -1.39
NPIPA3F8WFD2 AC091304.4-201ENST00000565703 620 ntBASIC6.36□□□□□ -1.39
NPIPA3F8WFD2 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC6.36□□□□□ -1.39
NPIPA3F8WFD2 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC6.36□□□□□ -1.39
NPIPA3F8WFD2 AC008736.1-201ENST00000592431 568 ntTSL 2 BASIC6.36□□□□□ -1.39
NPIPA3F8WFD2 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC6.36□□□□□ -1.39
NPIPA3F8WFD2 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC6.36□□□□□ -1.39
NPIPA3F8WFD2 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC6.36□□□□□ -1.39
NPIPA3F8WFD2 TMEM14EP-202ENST00000639378 1296 ntBASIC6.36□□□□□ -1.39
NPIPA3F8WFD2 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
NPIPA3F8WFD2 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
NPIPA3F8WFD2 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
NPIPA3F8WFD2 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
NPIPA3F8WFD2 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
NPIPA3F8WFD2 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC6.36□□□□□ -1.39
NPIPA3F8WFD2 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC6.36□□□□□ -1.39
NPIPA3F8WFD2 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
NPIPA3F8WFD2 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NPIPA3F8WFD2 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NPIPA3F8WFD2 LARS-212ENST00000510191 3737 ntTSL 2 BASIC6.36□□□□□ -1.39
NPIPA3F8WFD2 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 AL358913.2-201ENST00000553881 1548 ntBASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 RPL5P5-201ENST00000392009 893 ntBASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 RPL18AP14-201ENST00000417685 526 ntBASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 RPL17P17-201ENST00000419491 557 ntBASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 CHCHD3P1-201ENST00000425516 676 ntBASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 RPL5P34-201ENST00000426545 891 ntBASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 WDR82P2-201ENST00000444540 928 ntBASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 SDHCP3-201ENST00000445371 506 ntBASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 RPL5P9-201ENST00000448118 886 ntBASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 RPL23AP8-201ENST00000479812 475 ntBASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 AK6-203ENST00000502819 743 ntTSL 5 BASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 IGLC4-201ENST00000517690 248 ntBASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 AC087855.2-201ENST00000518217 537 ntTSL 3 BASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 AC023827.2-201ENST00000566880 1061 ntBASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 MIR378C-201ENST00000578683 81 ntBASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 AL512356.3-201ENST00000623005 461 ntBASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 IPO5-229ENST00000631030 192 ntTSL 5 BASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 AL596275.2-203ENST00000641951 371 ntBASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 AL096816.1-201ENST00000623300 2920 ntBASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
NPIPA3F8WFD2 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms