Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CLIP2Q9UDT6 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
CLIP2Q9UDT6 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC8.21□□□□□ -1.1
CLIP2Q9UDT6 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CLIP2Q9UDT6 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
CLIP2Q9UDT6 HSPD1P4-201ENST00000547203 1702 ntBASIC8.2□□□□□ -1.1
CLIP2Q9UDT6 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CLIP2Q9UDT6 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC8.2□□□□□ -1.1
CLIP2Q9UDT6 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CLIP2Q9UDT6 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CLIP2Q9UDT6 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC8.2□□□□□ -1.1
CLIP2Q9UDT6 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CLIP2Q9UDT6 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
CLIP2Q9UDT6 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC8.2□□□□□ -1.1
CLIP2Q9UDT6 AL121949.2-201ENST00000403446 1548 ntBASIC8.2□□□□□ -1.1
CLIP2Q9UDT6 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC8.2□□□□□ -1.1
CLIP2Q9UDT6 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CLIP2Q9UDT6 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC8.2□□□□□ -1.1
CLIP2Q9UDT6 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
CLIP2Q9UDT6 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CLIP2Q9UDT6 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CLIP2Q9UDT6 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC8.2□□□□□ -1.1
CLIP2Q9UDT6 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CLIP2Q9UDT6 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC8.2□□□□□ -1.1
CLIP2Q9UDT6 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC8.2□□□□□ -1.1
CLIP2Q9UDT6 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC8.2□□□□□ -1.1
CLIP2Q9UDT6 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC8.2□□□□□ -1.1
CLIP2Q9UDT6 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC8.2□□□□□ -1.1
CLIP2Q9UDT6 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC8.2□□□□□ -1.1
CLIP2Q9UDT6 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC8.2□□□□□ -1.1
CLIP2Q9UDT6 AL096803.1-201ENST00000456921 1021 ntBASIC8.2□□□□□ -1.1
CLIP2Q9UDT6 PPP1R2P6-201ENST00000478565 588 ntBASIC8.2□□□□□ -1.1
CLIP2Q9UDT6 MRPS5P3-201ENST00000515577 166 ntBASIC8.2□□□□□ -1.1
CLIP2Q9UDT6 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC8.2□□□□□ -1.1
CLIP2Q9UDT6 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC8.2□□□□□ -1.1
CLIP2Q9UDT6 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC8.2□□□□□ -1.1
CLIP2Q9UDT6 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC8.2□□□□□ -1.1
CLIP2Q9UDT6 AP002345.2-201ENST00000609961 904 ntBASIC8.2□□□□□ -1.1
CLIP2Q9UDT6 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CLIP2Q9UDT6 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC8.2□□□□□ -1.1
CLIP2Q9UDT6 CASC19-232ENST00000641480 1244 ntBASIC8.2□□□□□ -1.1
CLIP2Q9UDT6 AC012213.2-201ENST00000562917 4597 ntBASIC8.2□□□□□ -1.1
CLIP2Q9UDT6 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC8.2□□□□□ -1.1
CLIP2Q9UDT6 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC8.2□□□□□ -1.1
CLIP2Q9UDT6 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CLIP2Q9UDT6 C1D-202ENST00000407324 1379 ntTSL 3 BASIC8.2□□□□□ -1.1
CLIP2Q9UDT6 VN2R1P-201ENST00000449668 1743 ntBASIC8.2□□□□□ -1.1
CLIP2Q9UDT6 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC8.2□□□□□ -1.1
CLIP2Q9UDT6 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CLIP2Q9UDT6 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CLIP2Q9UDT6 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CLIP2Q9UDT6 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CLIP2Q9UDT6 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC8.19□□□□□ -1.1
CLIP2Q9UDT6 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CLIP2Q9UDT6 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
CLIP2Q9UDT6 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CLIP2Q9UDT6 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC8.19□□□□□ -1.1
CLIP2Q9UDT6 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CLIP2Q9UDT6 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CLIP2Q9UDT6 RNA5SP152-201ENST00000365184 110 ntBASIC8.19□□□□□ -1.1
CLIP2Q9UDT6 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC8.19□□□□□ -1.1
CLIP2Q9UDT6 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC8.19□□□□□ -1.1
CLIP2Q9UDT6 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC8.19□□□□□ -1.1
CLIP2Q9UDT6 AC083855.1-201ENST00000440041 258 ntBASIC8.19□□□□□ -1.1
CLIP2Q9UDT6 UBQLN1P1-207ENST00000441056 1169 ntBASIC8.19□□□□□ -1.1
CLIP2Q9UDT6 AC092164.1-203ENST00000444501 723 ntTSL 3 BASIC8.19□□□□□ -1.1
CLIP2Q9UDT6 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CLIP2Q9UDT6 AC073476.1-201ENST00000452854 407 ntBASIC8.19□□□□□ -1.1
CLIP2Q9UDT6 RN7SL492P-201ENST00000460700 295 ntBASIC8.19□□□□□ -1.1
CLIP2Q9UDT6 RPL34P34-201ENST00000465389 354 ntBASIC8.19□□□□□ -1.1
CLIP2Q9UDT6 RN7SL350P-201ENST00000492591 299 ntBASIC8.19□□□□□ -1.1
CLIP2Q9UDT6 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC8.19□□□□□ -1.1
CLIP2Q9UDT6 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC8.19□□□□□ -1.1
CLIP2Q9UDT6 RN7SKP98-201ENST00000517070 156 ntBASIC8.19□□□□□ -1.1
CLIP2Q9UDT6 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC8.19□□□□□ -1.1
CLIP2Q9UDT6 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC8.19□□□□□ -1.1
CLIP2Q9UDT6 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC8.19□□□□□ -1.1
CLIP2Q9UDT6 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC8.19□□□□□ -1.1
CLIP2Q9UDT6 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC8.19□□□□□ -1.1
CLIP2Q9UDT6 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC8.19□□□□□ -1.1
CLIP2Q9UDT6 MIR378C-201ENST00000578683 81 ntBASIC8.19□□□□□ -1.1
CLIP2Q9UDT6 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC8.19□□□□□ -1.1
CLIP2Q9UDT6 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC8.19□□□□□ -1.1
CLIP2Q9UDT6 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC8.19□□□□□ -1.1
CLIP2Q9UDT6 MIR6849-201ENST00000618543 69 ntBASIC8.19□□□□□ -1.1
CLIP2Q9UDT6 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CLIP2Q9UDT6 AC011471.4-201ENST00000638271 216 ntBASIC8.19□□□□□ -1.1
CLIP2Q9UDT6 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
CLIP2Q9UDT6 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC8.19□□□□□ -1.1
CLIP2Q9UDT6 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CLIP2Q9UDT6 MELK-211ENST00000545008 2236 ntTSL 2 BASIC8.19□□□□□ -1.1
CLIP2Q9UDT6 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CLIP2Q9UDT6 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC8.19□□□□□ -1.1
CLIP2Q9UDT6 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CLIP2Q9UDT6 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
CLIP2Q9UDT6 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CLIP2Q9UDT6 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CLIP2Q9UDT6 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CLIP2Q9UDT6 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC8.19□□□□□ -1.1
CLIP2Q9UDT6 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC8.19□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms