Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CDK5RAP1Q96SZ6 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC7.43□□□□□ -1.22
CDK5RAP1Q96SZ6 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CDK5RAP1Q96SZ6 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CDK5RAP1Q96SZ6 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC7.43□□□□□ -1.22
CDK5RAP1Q96SZ6 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CDK5RAP1Q96SZ6 SNRPEP5-201ENST00000425442 278 ntBASIC7.43□□□□□ -1.22
CDK5RAP1Q96SZ6 AC009303.1-201ENST00000426307 352 ntBASIC7.43□□□□□ -1.22
CDK5RAP1Q96SZ6 AL121916.1-201ENST00000429405 308 ntBASIC7.43□□□□□ -1.22
CDK5RAP1Q96SZ6 FTH1P10-202ENST00000430907 550 ntBASIC7.43□□□□□ -1.22
CDK5RAP1Q96SZ6 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC7.43□□□□□ -1.22
CDK5RAP1Q96SZ6 MTCO3P17-201ENST00000443775 513 ntBASIC7.43□□□□□ -1.22
CDK5RAP1Q96SZ6 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC7.43□□□□□ -1.22
CDK5RAP1Q96SZ6 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CDK5RAP1Q96SZ6 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC7.43□□□□□ -1.22
CDK5RAP1Q96SZ6 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC7.43□□□□□ -1.22
CDK5RAP1Q96SZ6 AC007386.1-201ENST00000455212 582 ntBASIC7.43□□□□□ -1.22
CDK5RAP1Q96SZ6 NSRP1-205ENST00000479218 540 ntTSL 3 BASIC7.43□□□□□ -1.22
CDK5RAP1Q96SZ6 RN7SL849P-201ENST00000485236 295 ntBASIC7.43□□□□□ -1.22
CDK5RAP1Q96SZ6 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC7.43□□□□□ -1.22
CDK5RAP1Q96SZ6 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC7.43□□□□□ -1.22
CDK5RAP1Q96SZ6 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC7.43□□□□□ -1.22
CDK5RAP1Q96SZ6 AL121594.4-201ENST00000556211 1196 ntBASIC7.43□□□□□ -1.22
CDK5RAP1Q96SZ6 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC7.43□□□□□ -1.22
CDK5RAP1Q96SZ6 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC7.43□□□□□ -1.22
CDK5RAP1Q96SZ6 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC7.43□□□□□ -1.22
CDK5RAP1Q96SZ6 AC122710.3-201ENST00000606566 541 ntBASIC7.43□□□□□ -1.22
CDK5RAP1Q96SZ6 MIR6883-201ENST00000614952 78 ntBASIC7.43□□□□□ -1.22
CDK5RAP1Q96SZ6 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
CDK5RAP1Q96SZ6 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
CDK5RAP1Q96SZ6 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC7.43□□□□□ -1.22
CDK5RAP1Q96SZ6 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC7.43□□□□□ -1.22
CDK5RAP1Q96SZ6 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC7.43□□□□□ -1.22
CDK5RAP1Q96SZ6 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CDK5RAP1Q96SZ6 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
CDK5RAP1Q96SZ6 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC7.43□□□□□ -1.22
CDK5RAP1Q96SZ6 INTS7-202ENST00000366993 3422 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CDK5RAP1Q96SZ6 ZIM3-201ENST00000269834 2627 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CDK5RAP1Q96SZ6 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CDK5RAP1Q96SZ6 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC7.43□□□□□ -1.22
CDK5RAP1Q96SZ6 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
CDK5RAP1Q96SZ6 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
CDK5RAP1Q96SZ6 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
CDK5RAP1Q96SZ6 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC7.43□□□□□ -1.22
CDK5RAP1Q96SZ6 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC7.43□□□□□ -1.22
CDK5RAP1Q96SZ6 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CDK5RAP1Q96SZ6 AL356361.1-201ENST00000400943 1459 ntBASIC7.43□□□□□ -1.22
CDK5RAP1Q96SZ6 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC7.42□□□□□ -1.22
CDK5RAP1Q96SZ6 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
CDK5RAP1Q96SZ6 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CDK5RAP1Q96SZ6 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC7.42□□□□□ -1.22
CDK5RAP1Q96SZ6 SFTPD-AS1-201ENST00000608229 5001 ntBASIC7.42□□□□□ -1.22
CDK5RAP1Q96SZ6 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CDK5RAP1Q96SZ6 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CDK5RAP1Q96SZ6 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
CDK5RAP1Q96SZ6 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
CDK5RAP1Q96SZ6 RNA5SP280-201ENST00000411230 115 ntBASIC7.42□□□□□ -1.22
CDK5RAP1Q96SZ6 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC7.42□□□□□ -1.22
CDK5RAP1Q96SZ6 AL354794.2-201ENST00000424795 1248 ntBASIC7.42□□□□□ -1.22
CDK5RAP1Q96SZ6 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC7.42□□□□□ -1.22
CDK5RAP1Q96SZ6 AL356133.1-201ENST00000444762 372 ntBASIC7.42□□□□□ -1.22
CDK5RAP1Q96SZ6 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CDK5RAP1Q96SZ6 AL606517.1-201ENST00000446914 387 ntBASIC7.42□□□□□ -1.22
CDK5RAP1Q96SZ6 PRDX1P1-201ENST00000449329 596 ntBASIC7.42□□□□□ -1.22
CDK5RAP1Q96SZ6 EIF4A2P2-201ENST00000455776 1070 ntBASIC7.42□□□□□ -1.22
CDK5RAP1Q96SZ6 AL133480.2-201ENST00000456723 487 ntBASIC7.42□□□□□ -1.22
CDK5RAP1Q96SZ6 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC7.42□□□□□ -1.22
CDK5RAP1Q96SZ6 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC7.42□□□□□ -1.22
CDK5RAP1Q96SZ6 RPS16P9-201ENST00000477220 427 ntBASIC7.42□□□□□ -1.22
CDK5RAP1Q96SZ6 NREP-217ENST00000509025 987 ntTSL 3 BASIC7.42□□□□□ -1.22
CDK5RAP1Q96SZ6 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC7.42□□□□□ -1.22
CDK5RAP1Q96SZ6 SCARNA6-201ENST00000515982 265 ntBASIC7.42□□□□□ -1.22
CDK5RAP1Q96SZ6 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC7.42□□□□□ -1.22
CDK5RAP1Q96SZ6 PTTG3P-201ENST00000521862 606 ntBASIC7.42□□□□□ -1.22
CDK5RAP1Q96SZ6 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC7.42□□□□□ -1.22
CDK5RAP1Q96SZ6 AC130366.1-201ENST00000526505 1192 ntBASIC7.42□□□□□ -1.22
CDK5RAP1Q96SZ6 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC7.42□□□□□ -1.22
CDK5RAP1Q96SZ6 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC7.42□□□□□ -1.22
CDK5RAP1Q96SZ6 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC7.42□□□□□ -1.22
CDK5RAP1Q96SZ6 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC7.42□□□□□ -1.22
CDK5RAP1Q96SZ6 AC006116.5-201ENST00000591936 559 ntBASIC7.42□□□□□ -1.22
CDK5RAP1Q96SZ6 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC7.42□□□□□ -1.22
CDK5RAP1Q96SZ6 AC006386.1-201ENST00000619436 415 ntBASIC7.42□□□□□ -1.22
CDK5RAP1Q96SZ6 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC7.42□□□□□ -1.22
CDK5RAP1Q96SZ6 AC012629.3-201ENST00000623397 328 ntBASIC7.42□□□□□ -1.22
CDK5RAP1Q96SZ6 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC7.42□□□□□ -1.22
CDK5RAP1Q96SZ6 TEX41-279ENST00000629149 609 ntTSL 5 BASIC7.42□□□□□ -1.22
CDK5RAP1Q96SZ6 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
CDK5RAP1Q96SZ6 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC7.42□□□□□ -1.22
CDK5RAP1Q96SZ6 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
CDK5RAP1Q96SZ6 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CDK5RAP1Q96SZ6 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CDK5RAP1Q96SZ6 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
CDK5RAP1Q96SZ6 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CDK5RAP1Q96SZ6 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CDK5RAP1Q96SZ6 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
CDK5RAP1Q96SZ6 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CDK5RAP1Q96SZ6 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC7.42□□□□□ -1.22
CDK5RAP1Q96SZ6 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC7.42□□□□□ -1.22
CDK5RAP1Q96SZ6 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms