Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 AP003066.1-201ENST00000527528 1647 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
NHLRC1Q6VVB1 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC6.27□□□□□ -1.4
NHLRC1Q6VVB1 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.27□□□□□ -1.4
NHLRC1Q6VVB1 CDY10P-201ENST00000452415 1567 ntBASIC6.27□□□□□ -1.41
NHLRC1Q6VVB1 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
NHLRC1Q6VVB1 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
NHLRC1Q6VVB1 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.27□□□□□ -1.41
NHLRC1Q6VVB1 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
NHLRC1Q6VVB1 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC6.27□□□□□ -1.41
NHLRC1Q6VVB1 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.27□□□□□ -1.41
NHLRC1Q6VVB1 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC6.27□□□□□ -1.41
NHLRC1Q6VVB1 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
NHLRC1Q6VVB1 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
NHLRC1Q6VVB1 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
NHLRC1Q6VVB1 SNORA70.5-201ENST00000365519 135 ntBASIC6.27□□□□□ -1.41
NHLRC1Q6VVB1 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
NHLRC1Q6VVB1 FAUP2-201ENST00000394301 401 ntBASIC6.27□□□□□ -1.41
NHLRC1Q6VVB1 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC6.27□□□□□ -1.41
NHLRC1Q6VVB1 HNRNPH1P2-201ENST00000396845 1210 ntBASIC6.27□□□□□ -1.41
NHLRC1Q6VVB1 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
NHLRC1Q6VVB1 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC6.27□□□□□ -1.41
NHLRC1Q6VVB1 AL021707.2-202ENST00000422408 1080 ntTSL 3 BASIC6.27□□□□□ -1.41
NHLRC1Q6VVB1 PSMC1P2-201ENST00000423961 1204 ntBASIC6.27□□□□□ -1.41
NHLRC1Q6VVB1 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
NHLRC1Q6VVB1 AC006333.1-204ENST00000429396 648 ntTSL 3 BASIC6.27□□□□□ -1.41
NHLRC1Q6VVB1 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC6.27□□□□□ -1.41
NHLRC1Q6VVB1 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC6.27□□□□□ -1.41
NHLRC1Q6VVB1 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC6.27□□□□□ -1.41
NHLRC1Q6VVB1 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC6.27□□□□□ -1.41
NHLRC1Q6VVB1 SCDP1-201ENST00000455244 1081 ntBASIC6.27□□□□□ -1.41
NHLRC1Q6VVB1 PSMA6P2-201ENST00000457574 686 ntBASIC6.27□□□□□ -1.41
NHLRC1Q6VVB1 AL928654.1-201ENST00000476081 354 ntBASIC6.27□□□□□ -1.41
NHLRC1Q6VVB1 MYL6P4-201ENST00000477911 453 ntBASIC6.27□□□□□ -1.41
NHLRC1Q6VVB1 ANK3-213ENST00000486349 493 ntTSL 2 BASIC6.27□□□□□ -1.41
NHLRC1Q6VVB1 NACAP6-201ENST00000509572 622 ntBASIC6.27□□□□□ -1.41
NHLRC1Q6VVB1 AC253576.1-201ENST00000511645 1156 ntBASIC6.27□□□□□ -1.41
NHLRC1Q6VVB1 RPS23-208ENST00000512493 443 ntTSL 3 BASIC6.27□□□□□ -1.41
NHLRC1Q6VVB1 OOSP1P2-201ENST00000579644 351 ntBASIC6.27□□□□□ -1.41
NHLRC1Q6VVB1 AP006587.6-201ENST00000582128 1091 ntBASIC6.27□□□□□ -1.41
NHLRC1Q6VVB1 COX6CP16-201ENST00000603667 216 ntBASIC6.27□□□□□ -1.41
NHLRC1Q6VVB1 AL161931.1-201ENST00000612768 246 ntBASIC6.27□□□□□ -1.41
NHLRC1Q6VVB1 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
NHLRC1Q6VVB1 DLST-216ENST00000626051 252 ntTSL 5 BASIC6.27□□□□□ -1.41
NHLRC1Q6VVB1 FKBP1AP4-201ENST00000631775 336 ntBASIC6.27□□□□□ -1.41
NHLRC1Q6VVB1 AC183089.2-201ENST00000637931 916 ntBASIC6.27□□□□□ -1.41
NHLRC1Q6VVB1 AL356585.10-201ENST00000641883 123 ntBASIC6.27□□□□□ -1.41
NHLRC1Q6VVB1 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.27□□□□□ -1.41
NHLRC1Q6VVB1 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.27□□□□□ -1.41
NHLRC1Q6VVB1 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
NHLRC1Q6VVB1 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6.27□□□□□ -1.41
NHLRC1Q6VVB1 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
NHLRC1Q6VVB1 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
NHLRC1Q6VVB1 AL359263.1-201ENST00000441188 2796 ntBASIC6.27□□□□□ -1.41
NHLRC1Q6VVB1 MIPEPP2-201ENST00000422560 1819 ntBASIC6.27□□□□□ -1.41
NHLRC1Q6VVB1 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.27□□□□□ -1.41
NHLRC1Q6VVB1 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
NHLRC1Q6VVB1 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
NHLRC1Q6VVB1 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
NHLRC1Q6VVB1 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
NHLRC1Q6VVB1 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
NHLRC1Q6VVB1 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
NHLRC1Q6VVB1 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
NHLRC1Q6VVB1 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
NHLRC1Q6VVB1 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
NHLRC1Q6VVB1 TOPORSLP1-201ENST00000467693 2102 ntBASIC6.26□□□□□ -1.41
NHLRC1Q6VVB1 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.26□□□□□ -1.41
NHLRC1Q6VVB1 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NHLRC1Q6VVB1 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.26□□□□□ -1.41
NHLRC1Q6VVB1 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
NHLRC1Q6VVB1 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
NHLRC1Q6VVB1 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC6.26□□□□□ -1.41
NHLRC1Q6VVB1 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.26□□□□□ -1.41
NHLRC1Q6VVB1 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NHLRC1Q6VVB1 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
NHLRC1Q6VVB1 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC6.26□□□□□ -1.41
NHLRC1Q6VVB1 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
NHLRC1Q6VVB1 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC6.26□□□□□ -1.41
NHLRC1Q6VVB1 U3.48-201ENST00000363172 216 ntBASIC6.26□□□□□ -1.41
NHLRC1Q6VVB1 RNA5SP172-201ENST00000365061 118 ntBASIC6.26□□□□□ -1.41
NHLRC1Q6VVB1 U3.14-201ENST00000365363 227 ntBASIC6.26□□□□□ -1.41
NHLRC1Q6VVB1 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC6.26□□□□□ -1.41
NHLRC1Q6VVB1 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC6.26□□□□□ -1.41
NHLRC1Q6VVB1 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC6.26□□□□□ -1.41
NHLRC1Q6VVB1 SDHCP3-201ENST00000445371 506 ntBASIC6.26□□□□□ -1.41
NHLRC1Q6VVB1 PCMTD1P3-201ENST00000451824 472 ntBASIC6.26□□□□□ -1.41
NHLRC1Q6VVB1 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms