Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC6.8□□□□□ -1.32
ZNF549Q6P9A3 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
ZNF549Q6P9A3 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
ZNF549Q6P9A3 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
ZNF549Q6P9A3 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
ZNF549Q6P9A3 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC6.8□□□□□ -1.32
ZNF549Q6P9A3 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
ZNF549Q6P9A3 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC6.8□□□□□ -1.32
ZNF549Q6P9A3 NEK2P4-201ENST00000425793 1329 ntBASIC6.8□□□□□ -1.32
ZNF549Q6P9A3 AL512310.3-201ENST00000547023 1335 ntBASIC6.8□□□□□ -1.32
ZNF549Q6P9A3 QRSL1P3-201ENST00000552666 1316 ntBASIC6.8□□□□□ -1.32
ZNF549Q6P9A3 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
ZNF549Q6P9A3 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
ZNF549Q6P9A3 GMFG-201ENST00000253054 616 ntTSL 5 BASIC6.8□□□□□ -1.32
ZNF549Q6P9A3 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
ZNF549Q6P9A3 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
ZNF549Q6P9A3 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
ZNF549Q6P9A3 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
ZNF549Q6P9A3 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
ZNF549Q6P9A3 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
ZNF549Q6P9A3 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
ZNF549Q6P9A3 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC6.8□□□□□ -1.32
ZNF549Q6P9A3 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
ZNF549Q6P9A3 RNA5SP280-201ENST00000411230 115 ntBASIC6.8□□□□□ -1.32
ZNF549Q6P9A3 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC6.8□□□□□ -1.32
ZNF549Q6P9A3 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC6.8□□□□□ -1.32
ZNF549Q6P9A3 AC007365.2-201ENST00000428806 458 ntBASIC6.8□□□□□ -1.32
ZNF549Q6P9A3 AL645936.2-201ENST00000430565 928 ntBASIC6.8□□□□□ -1.32
ZNF549Q6P9A3 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC6.8□□□□□ -1.32
ZNF549Q6P9A3 AC114402.2-201ENST00000432760 643 ntBASIC6.8□□□□□ -1.32
ZNF549Q6P9A3 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC6.8□□□□□ -1.32
ZNF549Q6P9A3 AC027124.1-201ENST00000440852 466 ntBASIC6.8□□□□□ -1.32
ZNF549Q6P9A3 SRP68P2-201ENST00000456184 254 ntBASIC6.8□□□□□ -1.32
ZNF549Q6P9A3 RN7SL518P-201ENST00000491887 280 ntBASIC6.8□□□□□ -1.32
ZNF549Q6P9A3 DCAF13P2-201ENST00000514188 555 ntBASIC6.8□□□□□ -1.32
ZNF549Q6P9A3 AC011352.2-201ENST00000514574 1016 ntBASIC6.8□□□□□ -1.32
ZNF549Q6P9A3 RN7SKP98-201ENST00000517070 156 ntBASIC6.8□□□□□ -1.32
ZNF549Q6P9A3 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC6.8□□□□□ -1.32
ZNF549Q6P9A3 IGHVIII-25-1-201ENST00000522143 241 ntBASIC6.8□□□□□ -1.32
ZNF549Q6P9A3 PDCL3P1-201ENST00000534575 734 ntBASIC6.8□□□□□ -1.32
ZNF549Q6P9A3 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC6.8□□□□□ -1.32
ZNF549Q6P9A3 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC6.8□□□□□ -1.32
ZNF549Q6P9A3 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC6.8□□□□□ -1.32
ZNF549Q6P9A3 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC6.8□□□□□ -1.32
ZNF549Q6P9A3 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.8□□□□□ -1.32
ZNF549Q6P9A3 AC092953.2-201ENST00000608000 699 ntBASIC6.8□□□□□ -1.32
ZNF549Q6P9A3 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC6.8□□□□□ -1.32
ZNF549Q6P9A3 AC018558.4-201ENST00000622153 281 ntBASIC6.8□□□□□ -1.32
ZNF549Q6P9A3 AC016542.2-201ENST00000624201 619 ntBASIC6.8□□□□□ -1.32
ZNF549Q6P9A3 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC6.8□□□□□ -1.32
ZNF549Q6P9A3 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC6.8□□□□□ -1.32
ZNF549Q6P9A3 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
ZNF549Q6P9A3 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC6.8□□□□□ -1.32
ZNF549Q6P9A3 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC6.8□□□□□ -1.32
ZNF549Q6P9A3 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
ZNF549Q6P9A3 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
ZNF549Q6P9A3 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
ZNF549Q6P9A3 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
ZNF549Q6P9A3 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC6.8□□□□□ -1.32
ZNF549Q6P9A3 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
ZNF549Q6P9A3 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC6.8□□□□□ -1.32
ZNF549Q6P9A3 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
ZNF549Q6P9A3 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.79□□□□□ -1.32
ZNF549Q6P9A3 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
ZNF549Q6P9A3 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
ZNF549Q6P9A3 TUBBP10-201ENST00000427668 1301 ntBASIC6.79□□□□□ -1.32
ZNF549Q6P9A3 RACGAP1P-201ENST00000550663 1879 ntBASIC6.79□□□□□ -1.32
ZNF549Q6P9A3 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
ZNF549Q6P9A3 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
ZNF549Q6P9A3 Z93022.1-201ENST00000433228 1554 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
ZNF549Q6P9A3 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.79□□□□□ -1.32
ZNF549Q6P9A3 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
ZNF549Q6P9A3 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
ZNF549Q6P9A3 AKR1C4-201ENST00000263126 1192 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
ZNF549Q6P9A3 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
ZNF549Q6P9A3 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
ZNF549Q6P9A3 MEG8-201ENST00000414488 800 ntTSL 3 BASIC6.79□□□□□ -1.32
ZNF549Q6P9A3 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC6.79□□□□□ -1.32
ZNF549Q6P9A3 FABP5P1-201ENST00000423401 411 ntBASIC6.79□□□□□ -1.32
ZNF549Q6P9A3 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC6.79□□□□□ -1.32
ZNF549Q6P9A3 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC6.79□□□□□ -1.32
ZNF549Q6P9A3 FABP5P2-201ENST00000439042 408 ntBASIC6.79□□□□□ -1.32
ZNF549Q6P9A3 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC6.79□□□□□ -1.32
ZNF549Q6P9A3 PMS2P9-201ENST00000441237 515 ntBASIC6.79□□□□□ -1.32
ZNF549Q6P9A3 AL157385.1-201ENST00000446973 268 ntBASIC6.79□□□□□ -1.32
ZNF549Q6P9A3 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC6.79□□□□□ -1.32
ZNF549Q6P9A3 OR7E7P-201ENST00000455678 1012 ntBASIC6.79□□□□□ -1.32
ZNF549Q6P9A3 NMNAT1P3-201ENST00000457517 888 ntBASIC6.79□□□□□ -1.32
ZNF549Q6P9A3 RN7SL456P-201ENST00000469290 295 ntBASIC6.79□□□□□ -1.32
ZNF549Q6P9A3 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
ZNF549Q6P9A3 PPP1R2P6-201ENST00000478565 588 ntBASIC6.79□□□□□ -1.32
ZNF549Q6P9A3 AC096754.1-201ENST00000508904 818 ntBASIC6.79□□□□□ -1.32
ZNF549Q6P9A3 AC105202.1-203ENST00000518024 875 ntTSL 3 BASIC6.79□□□□□ -1.32
ZNF549Q6P9A3 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC6.79□□□□□ -1.32
ZNF549Q6P9A3 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC6.79□□□□□ -1.32
ZNF549Q6P9A3 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
ZNF549Q6P9A3 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC6.79□□□□□ -1.32
ZNF549Q6P9A3 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC6.79□□□□□ -1.32
ZNF549Q6P9A3 MIR4800-201ENST00000537353 80 ntBASIC6.79□□□□□ -1.32
ZNF549Q6P9A3 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms