Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC9.37□□□□□ -0.91
CCDC27Q2M243 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
CCDC27Q2M243 OSBPL9-202ENST00000371714 3352 ntAPPRIS ALT1 TSL 2 BASIC9.37□□□□□ -0.91
CCDC27Q2M243 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC9.37□□□□□ -0.91
CCDC27Q2M243 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
CCDC27Q2M243 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
CCDC27Q2M243 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC9.37□□□□□ -0.91
CCDC27Q2M243 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
CCDC27Q2M243 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
CCDC27Q2M243 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC9.36□□□□□ -0.91
CCDC27Q2M243 TRDMT1-210ENST00000488990 1301 ntTSL 2 BASIC9.36□□□□□ -0.91
CCDC27Q2M243 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
CCDC27Q2M243 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
CCDC27Q2M243 TMC3-AS1-206ENST00000612811 2726 ntBASIC9.36□□□□□ -0.91
CCDC27Q2M243 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
CCDC27Q2M243 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
CCDC27Q2M243 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC9.36□□□□□ -0.91
CCDC27Q2M243 AL356361.1-201ENST00000400943 1459 ntBASIC9.36□□□□□ -0.91
CCDC27Q2M243 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
CCDC27Q2M243 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC9.36□□□□□ -0.91
CCDC27Q2M243 GLYATL2-201ENST00000287275 1640 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
CCDC27Q2M243 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
CCDC27Q2M243 RNA5SP472-201ENST00000363868 119 ntBASIC9.36□□□□□ -0.91
CCDC27Q2M243 SNORD115-48-201ENST00000364764 76 ntBASIC9.36□□□□□ -0.91
CCDC27Q2M243 U3.14-201ENST00000365363 227 ntBASIC9.36□□□□□ -0.91
CCDC27Q2M243 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC9.36□□□□□ -0.91
CCDC27Q2M243 AC006511.2-201ENST00000388966 660 ntBASIC9.36□□□□□ -0.91
CCDC27Q2M243 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC9.36□□□□□ -0.91
CCDC27Q2M243 RN7SKP254-201ENST00000410685 310 ntBASIC9.36□□□□□ -0.91
CCDC27Q2M243 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
CCDC27Q2M243 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC9.36□□□□□ -0.91
CCDC27Q2M243 MTND4P24-201ENST00000424002 397 ntBASIC9.36□□□□□ -0.91
CCDC27Q2M243 CENPN-204ENST00000428963 971 ntTSL 2 BASIC9.36□□□□□ -0.91
CCDC27Q2M243 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
CCDC27Q2M243 ATP5LP4-201ENST00000434169 307 ntBASIC9.36□□□□□ -0.91
CCDC27Q2M243 AC007000.2-201ENST00000442564 487 ntBASIC9.36□□□□□ -0.91
CCDC27Q2M243 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC9.36□□□□□ -0.91
CCDC27Q2M243 RPLP0P1-201ENST00000457002 361 ntBASIC9.36□□□□□ -0.91
CCDC27Q2M243 AC091982.1-202ENST00000473923 343 ntBASIC9.36□□□□□ -0.91
CCDC27Q2M243 ANK3-213ENST00000486349 493 ntTSL 2 BASIC9.36□□□□□ -0.91
CCDC27Q2M243 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC9.36□□□□□ -0.91
CCDC27Q2M243 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
CCDC27Q2M243 RNU6-889P-201ENST00000517189 103 ntBASIC9.36□□□□□ -0.91
CCDC27Q2M243 OR4C1P-201ENST00000530880 937 ntBASIC9.36□□□□□ -0.91
CCDC27Q2M243 AC090971.3-201ENST00000557871 1041 ntBASIC9.36□□□□□ -0.91
CCDC27Q2M243 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
CCDC27Q2M243 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC9.36□□□□□ -0.91
CCDC27Q2M243 ULK4P1-202ENST00000565174 503 ntBASIC9.36□□□□□ -0.91
CCDC27Q2M243 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC9.36□□□□□ -0.91
CCDC27Q2M243 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC9.36□□□□□ -0.91
CCDC27Q2M243 MIMT1-201ENST00000597105 1050 ntBASIC9.36□□□□□ -0.91
CCDC27Q2M243 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC9.36□□□□□ -0.91
CCDC27Q2M243 AC092032.1-201ENST00000603090 165 ntBASIC9.36□□□□□ -0.91
CCDC27Q2M243 COX6CP16-201ENST00000603667 216 ntBASIC9.36□□□□□ -0.91
CCDC27Q2M243 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC9.36□□□□□ -0.91
CCDC27Q2M243 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC9.36□□□□□ -0.91
CCDC27Q2M243 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
CCDC27Q2M243 AL355974.1-201ENST00000618896 1708 ntBASIC9.36□□□□□ -0.91
CCDC27Q2M243 BRINP3-201ENST00000367462 3142 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
CCDC27Q2M243 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
CCDC27Q2M243 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
CCDC27Q2M243 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
CCDC27Q2M243 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
CCDC27Q2M243 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
CCDC27Q2M243 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
CCDC27Q2M243 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
CCDC27Q2M243 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
CCDC27Q2M243 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC9.35□□□□□ -0.91
CCDC27Q2M243 AC009166.2-201ENST00000624410 2833 ntBASIC9.35□□□□□ -0.91
CCDC27Q2M243 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
CCDC27Q2M243 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
CCDC27Q2M243 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
CCDC27Q2M243 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
CCDC27Q2M243 FKBP1A-203ENST00000381724 976 ntTSL 2 BASIC9.35□□□□□ -0.91
CCDC27Q2M243 RNU6-40P-201ENST00000384254 107 ntBASIC9.35□□□□□ -0.91
CCDC27Q2M243 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
CCDC27Q2M243 RN7SKP232-201ENST00000410170 290 ntBASIC9.35□□□□□ -0.91
CCDC27Q2M243 RPL12P10-201ENST00000413498 498 ntBASIC9.35□□□□□ -0.91
CCDC27Q2M243 AL359885.1-201ENST00000415786 903 ntBASIC9.35□□□□□ -0.91
CCDC27Q2M243 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC9.35□□□□□ -0.91
CCDC27Q2M243 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC9.35□□□□□ -0.91
CCDC27Q2M243 HMGN1P6-201ENST00000438508 291 ntBASIC9.35□□□□□ -0.91
CCDC27Q2M243 RPL29P7-201ENST00000440227 457 ntBASIC9.35□□□□□ -0.91
CCDC27Q2M243 RPL31P20-201ENST00000449593 360 ntBASIC9.35□□□□□ -0.91
CCDC27Q2M243 AL929410.2-201ENST00000451170 189 ntBASIC9.35□□□□□ -0.91
CCDC27Q2M243 AP002345.1-201ENST00000456493 928 ntBASIC9.35□□□□□ -0.91
CCDC27Q2M243 AL592464.2-201ENST00000457440 607 ntTSL 2 BASIC9.35□□□□□ -0.91
CCDC27Q2M243 RN7SL149P-201ENST00000465197 281 ntBASIC9.35□□□□□ -0.91
CCDC27Q2M243 AC016687.1-201ENST00000482574 353 ntBASIC9.35□□□□□ -0.91
CCDC27Q2M243 MTCO2P9-201ENST00000503214 694 ntBASIC9.35□□□□□ -0.91
CCDC27Q2M243 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
CCDC27Q2M243 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC9.35□□□□□ -0.91
CCDC27Q2M243 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC9.35□□□□□ -0.91
CCDC27Q2M243 AC107993.1-201ENST00000591343 684 ntBASIC9.35□□□□□ -0.91
CCDC27Q2M243 AC245884.10-201ENST00000597355 337 ntBASIC9.35□□□□□ -0.91
CCDC27Q2M243 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC9.35□□□□□ -0.91
CCDC27Q2M243 AC092960.1-201ENST00000604762 351 ntBASIC9.35□□□□□ -0.91
CCDC27Q2M243 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
CCDC27Q2M243 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC9.35□□□□□ -0.91
CCDC27Q2M243 AC090506.2-201ENST00000624521 419 ntBASIC9.35□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms