Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SUMO3P55854 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SUMO3P55854 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC6.57□□□□□ -1.36
SUMO3P55854 GOT2P1-201ENST00000440922 1309 ntBASIC6.57□□□□□ -1.36
SUMO3P55854 MTND4P9-201ENST00000507819 1346 ntBASIC6.57□□□□□ -1.36
SUMO3P55854 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
SUMO3P55854 PLA2G7-202ENST00000537365 1747 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SUMO3P55854 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
SUMO3P55854 PAGE4-201ENST00000218068 499 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SUMO3P55854 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
SUMO3P55854 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SUMO3P55854 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC6.57□□□□□ -1.36
SUMO3P55854 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
SUMO3P55854 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC6.57□□□□□ -1.36
SUMO3P55854 ALDH1A1-202ENST00000376939 822 ntTSL 5 BASIC6.57□□□□□ -1.36
SUMO3P55854 AC090114.1-201ENST00000393266 448 ntBASIC6.57□□□□□ -1.36
SUMO3P55854 SNX18P13-201ENST00000412442 529 ntBASIC6.57□□□□□ -1.36
SUMO3P55854 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC6.57□□□□□ -1.36
SUMO3P55854 OR5P4P-201ENST00000424698 917 ntBASIC6.57□□□□□ -1.36
SUMO3P55854 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SUMO3P55854 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC6.57□□□□□ -1.36
SUMO3P55854 XKRY2-201ENST00000442362 1093 ntBASIC6.57□□□□□ -1.36
SUMO3P55854 RPL6P24-201ENST00000445338 864 ntBASIC6.57□□□□□ -1.36
SUMO3P55854 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC6.57□□□□□ -1.36
SUMO3P55854 RPSAP7-201ENST00000456871 885 ntBASIC6.57□□□□□ -1.36
SUMO3P55854 EIF2S2P5-201ENST00000457635 968 ntBASIC6.57□□□□□ -1.36
SUMO3P55854 AC018475.1-201ENST00000478358 465 ntBASIC6.57□□□□□ -1.36
SUMO3P55854 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC6.57□□□□□ -1.36
SUMO3P55854 RN7SL306P-201ENST00000492941 296 ntBASIC6.57□□□□□ -1.36
SUMO3P55854 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SUMO3P55854 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SUMO3P55854 CHCHD2P7-201ENST00000508008 452 ntBASIC6.57□□□□□ -1.36
SUMO3P55854 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC6.57□□□□□ -1.36
SUMO3P55854 FABP5P6-201ENST00000510588 409 ntBASIC6.57□□□□□ -1.36
SUMO3P55854 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC6.57□□□□□ -1.36
SUMO3P55854 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC6.57□□□□□ -1.36
SUMO3P55854 SFTA3-210ENST00000521945 1116 ntTSL 2 BASIC6.57□□□□□ -1.36
SUMO3P55854 GTF2IP11-201ENST00000526931 420 ntBASIC6.57□□□□□ -1.36
SUMO3P55854 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
SUMO3P55854 AC113192.3-201ENST00000529152 742 ntBASIC6.57□□□□□ -1.36
SUMO3P55854 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC6.57□□□□□ -1.36
SUMO3P55854 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC6.57□□□□□ -1.36
SUMO3P55854 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SUMO3P55854 AC022405.1-201ENST00000559841 516 ntTSL 3 BASIC6.57□□□□□ -1.36
SUMO3P55854 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC6.57□□□□□ -1.36
SUMO3P55854 NDUFA3P4-201ENST00000560814 250 ntBASIC6.57□□□□□ -1.36
SUMO3P55854 AL031846.1-201ENST00000560933 314 ntBASIC6.57□□□□□ -1.36
SUMO3P55854 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC6.57□□□□□ -1.36
SUMO3P55854 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC6.57□□□□□ -1.36
SUMO3P55854 AC061975.3-201ENST00000583209 244 ntBASIC6.57□□□□□ -1.36
SUMO3P55854 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC6.57□□□□□ -1.36
SUMO3P55854 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC6.57□□□□□ -1.36
SUMO3P55854 AC012640.3-201ENST00000607847 430 ntBASIC6.57□□□□□ -1.36
SUMO3P55854 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SUMO3P55854 pRNA.9-201ENST00000618609 89 ntBASIC6.57□□□□□ -1.36
SUMO3P55854 AC211433.3-201ENST00000623770 375 ntBASIC6.57□□□□□ -1.36
SUMO3P55854 Z83820.1-201ENST00000456978 1499 ntBASIC6.57□□□□□ -1.36
SUMO3P55854 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
SUMO3P55854 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SUMO3P55854 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
SUMO3P55854 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC6.57□□□□□ -1.36
SUMO3P55854 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
SUMO3P55854 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC6.57□□□□□ -1.36
SUMO3P55854 AC090771.1-201ENST00000585803 1618 ntBASIC6.57□□□□□ -1.36
SUMO3P55854 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
SUMO3P55854 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
SUMO3P55854 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SUMO3P55854 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.57□□□□□ -1.36
SUMO3P55854 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SUMO3P55854 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC6.57□□□□□ -1.36
SUMO3P55854 AC009501.3-201ENST00000605001 1352 ntBASIC6.57□□□□□ -1.36
SUMO3P55854 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC6.56□□□□□ -1.36
SUMO3P55854 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SUMO3P55854 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC6.56□□□□□ -1.36
SUMO3P55854 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
SUMO3P55854 AC135012.3-201ENST00000599841 4039 ntTSL 4 BASIC6.56□□□□□ -1.36
SUMO3P55854 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SUMO3P55854 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
SUMO3P55854 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.56□□□□□ -1.36
SUMO3P55854 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC6.56□□□□□ -1.36
SUMO3P55854 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SUMO3P55854 AL080312.1-201ENST00000256654 824 ntBASIC6.56□□□□□ -1.36
SUMO3P55854 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC6.56□□□□□ -1.36
SUMO3P55854 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
SUMO3P55854 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC6.56□□□□□ -1.36
SUMO3P55854 RPL12P1-201ENST00000374520 498 ntBASIC6.56□□□□□ -1.36
SUMO3P55854 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
SUMO3P55854 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC6.56□□□□□ -1.36
SUMO3P55854 PAICSP2-201ENST00000429118 1150 ntBASIC6.56□□□□□ -1.36
SUMO3P55854 NIP7P1-201ENST00000433227 512 ntBASIC6.56□□□□□ -1.36
SUMO3P55854 ST13P2-201ENST00000438916 1109 ntBASIC6.56□□□□□ -1.36
SUMO3P55854 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC6.56□□□□□ -1.36
SUMO3P55854 AL592464.2-201ENST00000457440 607 ntTSL 2 BASIC6.56□□□□□ -1.36
SUMO3P55854 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC6.56□□□□□ -1.36
SUMO3P55854 AL928654.1-201ENST00000476081 354 ntBASIC6.56□□□□□ -1.36
SUMO3P55854 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SUMO3P55854 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.56□□□□□ -1.36
SUMO3P55854 MRPL49P1-201ENST00000505951 535 ntBASIC6.56□□□□□ -1.36
SUMO3P55854 AC119751.4-201ENST00000507498 357 ntBASIC6.56□□□□□ -1.36
SUMO3P55854 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms