Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CIITAP33076 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC7.75□□□□□ -1.17
CIITAP33076 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC7.75□□□□□ -1.17
CIITAP33076 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC7.75□□□□□ -1.17
CIITAP33076 AL162456.1-201ENST00000634535 2006 ntBASIC7.75□□□□□ -1.17
CIITAP33076 ENO1P4-201ENST00000416471 1785 ntBASIC7.75□□□□□ -1.17
CIITAP33076 RNA5SP382-201ENST00000363355 112 ntBASIC7.75□□□□□ -1.17
CIITAP33076 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC7.75□□□□□ -1.17
CIITAP33076 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC7.75□□□□□ -1.17
CIITAP33076 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC7.75□□□□□ -1.17
CIITAP33076 AL672212.1-201ENST00000422246 400 ntBASIC7.75□□□□□ -1.17
CIITAP33076 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC7.75□□□□□ -1.17
CIITAP33076 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC7.75□□□□□ -1.17
CIITAP33076 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CIITAP33076 BMS1P11-201ENST00000442351 885 ntBASIC7.75□□□□□ -1.17
CIITAP33076 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC7.75□□□□□ -1.17
CIITAP33076 BMS1P9-201ENST00000457640 885 ntBASIC7.75□□□□□ -1.17
CIITAP33076 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC7.75□□□□□ -1.17
CIITAP33076 TFP1-201ENST00000460564 572 ntTSL 4 BASIC7.75□□□□□ -1.17
CIITAP33076 TFP1-203ENST00000490470 561 ntTSL 4 BASIC7.75□□□□□ -1.17
CIITAP33076 RN7SL187P-201ENST00000495587 303 ntBASIC7.75□□□□□ -1.17
CIITAP33076 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC7.75□□□□□ -1.17
CIITAP33076 SETP17-201ENST00000534163 817 ntBASIC7.75□□□□□ -1.17
CIITAP33076 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC7.75□□□□□ -1.17
CIITAP33076 AC089984.3-201ENST00000552838 363 ntBASIC7.75□□□□□ -1.17
CIITAP33076 AC010287.1-201ENST00000566916 357 ntBASIC7.75□□□□□ -1.17
CIITAP33076 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC7.75□□□□□ -1.17
CIITAP33076 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC7.75□□□□□ -1.17
CIITAP33076 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC7.75□□□□□ -1.17
CIITAP33076 IGKV2OR2-7-201ENST00000604652 304 ntBASIC7.75□□□□□ -1.17
CIITAP33076 AL590032.1-201ENST00000604920 252 ntBASIC7.75□□□□□ -1.17
CIITAP33076 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC7.75□□□□□ -1.17
CIITAP33076 MIR6849-201ENST00000618543 69 ntBASIC7.75□□□□□ -1.17
CIITAP33076 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC7.75□□□□□ -1.17
CIITAP33076 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CIITAP33076 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CIITAP33076 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC7.75□□□□□ -1.17
CIITAP33076 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CIITAP33076 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
CIITAP33076 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CIITAP33076 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CIITAP33076 AC092701.1-201ENST00000623627 1551 ntBASIC7.75□□□□□ -1.17
CIITAP33076 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CIITAP33076 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CIITAP33076 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
CIITAP33076 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CIITAP33076 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CIITAP33076 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
CIITAP33076 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CIITAP33076 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
CIITAP33076 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC7.74□□□□□ -1.17
CIITAP33076 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
CIITAP33076 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
CIITAP33076 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CIITAP33076 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
CIITAP33076 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CIITAP33076 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CIITAP33076 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC7.74□□□□□ -1.17
CIITAP33076 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC7.74□□□□□ -1.17
CIITAP33076 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC7.74□□□□□ -1.17
CIITAP33076 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CIITAP33076 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC7.74□□□□□ -1.17
CIITAP33076 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
CIITAP33076 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
CIITAP33076 RNU4ATAC2P-201ENST00000408674 126 ntBASIC7.74□□□□□ -1.17
CIITAP33076 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC7.74□□□□□ -1.17
CIITAP33076 SPATA20P1-201ENST00000423089 438 ntBASIC7.74□□□□□ -1.17
CIITAP33076 DUTP4-201ENST00000424782 475 ntBASIC7.74□□□□□ -1.17
CIITAP33076 TRBV29OR9-2-201ENST00000427589 333 ntBASIC7.74□□□□□ -1.17
CIITAP33076 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC7.74□□□□□ -1.17
CIITAP33076 CDK7P1-201ENST00000434574 693 ntBASIC7.74□□□□□ -1.17
CIITAP33076 AL022324.2-201ENST00000434827 780 ntBASIC7.74□□□□□ -1.17
CIITAP33076 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CIITAP33076 RPL23AP28-201ENST00000448062 470 ntBASIC7.74□□□□□ -1.17
CIITAP33076 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC7.74□□□□□ -1.17
CIITAP33076 RN7SL790P-201ENST00000474043 298 ntBASIC7.74□□□□□ -1.17
CIITAP33076 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CIITAP33076 SNX18P23-201ENST00000510867 677 ntBASIC7.74□□□□□ -1.17
CIITAP33076 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC7.74□□□□□ -1.17
CIITAP33076 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
CIITAP33076 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC7.74□□□□□ -1.17
CIITAP33076 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC7.74□□□□□ -1.17
CIITAP33076 MIR744-201ENST00000578242 98 ntBASIC7.74□□□□□ -1.17
CIITAP33076 TSHZ2-205ENST00000626626 670 ntBASIC7.74□□□□□ -1.17
CIITAP33076 CA10-204ENST00000570565 2276 ntTSL 5 BASIC7.74□□□□□ -1.17
CIITAP33076 RBMY1A3P-201ENST00000382670 1404 ntBASIC7.74□□□□□ -1.17
CIITAP33076 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
CIITAP33076 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
CIITAP33076 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC7.74□□□□□ -1.17
CIITAP33076 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC7.74□□□□□ -1.17
CIITAP33076 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CIITAP33076 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC7.74□□□□□ -1.17
CIITAP33076 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
CIITAP33076 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
CIITAP33076 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC7.74□□□□□ -1.17
CIITAP33076 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
CIITAP33076 AC096992.2-201ENST00000609553 1684 ntBASIC7.73□□□□□ -1.17
CIITAP33076 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
CIITAP33076 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC7.73□□□□□ -1.17
CIITAP33076 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms