Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
NCK1P16333 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
NCK1P16333 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
NCK1P16333 API5P1-201ENST00000424316 1510 ntBASIC6.41□□□□□ -1.38
NCK1P16333 MELK-211ENST00000545008 2236 ntTSL 2 BASIC6.41□□□□□ -1.38
NCK1P16333 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.41□□□□□ -1.38
NCK1P16333 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
NCK1P16333 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
NCK1P16333 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
NCK1P16333 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.41□□□□□ -1.38
NCK1P16333 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
NCK1P16333 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
NCK1P16333 SNORA55-201ENST00000364587 135 ntBASIC6.41□□□□□ -1.38
NCK1P16333 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
NCK1P16333 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
NCK1P16333 AL034372.1-201ENST00000407586 754 ntBASIC6.41□□□□□ -1.38
NCK1P16333 AC096537.2-201ENST00000413707 714 ntBASIC6.41□□□□□ -1.38
NCK1P16333 PPIAP30-201ENST00000415473 519 ntBASIC6.41□□□□□ -1.38
NCK1P16333 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
NCK1P16333 LINC00460-203ENST00000444865 739 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
NCK1P16333 OR7E102P-201ENST00000448855 1015 ntBASIC6.41□□□□□ -1.38
NCK1P16333 LINC02556-201ENST00000450776 346 ntTSL 3 BASIC6.41□□□□□ -1.38
NCK1P16333 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC6.41□□□□□ -1.38
NCK1P16333 MYL6P4-201ENST00000477911 453 ntBASIC6.41□□□□□ -1.38
NCK1P16333 AC007106.1-201ENST00000509666 600 ntTSL 4 BASIC6.41□□□□□ -1.38
NCK1P16333 OR7E1P-201ENST00000533891 958 ntBASIC6.41□□□□□ -1.38
NCK1P16333 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
NCK1P16333 SIGLEC31P-201ENST00000594237 551 ntBASIC6.41□□□□□ -1.38
NCK1P16333 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC6.41□□□□□ -1.38
NCK1P16333 CARSP1-201ENST00000603171 889 ntBASIC6.41□□□□□ -1.38
NCK1P16333 IFNA5-201ENST00000610521 987 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
NCK1P16333 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC6.41□□□□□ -1.38
NCK1P16333 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC6.41□□□□□ -1.38
NCK1P16333 AC138904.2-201ENST00000614412 107 ntBASIC6.41□□□□□ -1.38
NCK1P16333 AC025287.2-201ENST00000621911 668 ntBASIC6.41□□□□□ -1.38
NCK1P16333 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC6.41□□□□□ -1.38
NCK1P16333 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC6.41□□□□□ -1.38
NCK1P16333 AC073488.7-201ENST00000633785 778 ntBASIC6.41□□□□□ -1.38
NCK1P16333 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC6.41□□□□□ -1.38
NCK1P16333 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
NCK1P16333 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
NCK1P16333 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
NCK1P16333 RPS2P45-201ENST00000469997 2057 ntBASIC6.41□□□□□ -1.38
NCK1P16333 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC6.41□□□□□ -1.38
NCK1P16333 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
NCK1P16333 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC6.41□□□□□ -1.38
NCK1P16333 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
NCK1P16333 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
NCK1P16333 SFR1-201ENST00000369727 1438 ntAPPRIS P4 TSL 2 BASIC6.41□□□□□ -1.38
NCK1P16333 MTND5P12-201ENST00000502851 1449 ntBASIC6.41□□□□□ -1.38
NCK1P16333 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
NCK1P16333 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
NCK1P16333 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.4□□□□□ -1.38
NCK1P16333 AC092646.2-201ENST00000431242 2095 ntBASIC6.4□□□□□ -1.38
NCK1P16333 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
NCK1P16333 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
NCK1P16333 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
NCK1P16333 U3.1-201ENST00000362500 215 ntBASIC6.4□□□□□ -1.38
NCK1P16333 C6orf106-201ENST00000374021 916 ntAPPRIS ALT2 TSL 3 BASIC6.4□□□□□ -1.38
NCK1P16333 HNRNPCP2-201ENST00000399515 881 ntBASIC6.4□□□□□ -1.38
NCK1P16333 LINC01353-201ENST00000412772 775 ntTSL 3 BASIC6.4□□□□□ -1.38
NCK1P16333 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC6.4□□□□□ -1.38
NCK1P16333 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC6.4□□□□□ -1.38
NCK1P16333 CRYGGP-201ENST00000443337 145 ntBASIC6.4□□□□□ -1.38
NCK1P16333 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC6.4□□□□□ -1.38
NCK1P16333 WBP1LP1-201ENST00000460451 896 ntBASIC6.4□□□□□ -1.38
NCK1P16333 TAAR3P-201ENST00000466706 1078 ntBASIC6.4□□□□□ -1.38
NCK1P16333 RPS2P25-201ENST00000467247 580 ntBASIC6.4□□□□□ -1.38
NCK1P16333 RN7SL379P-201ENST00000479912 293 ntBASIC6.4□□□□□ -1.38
NCK1P16333 RN7SL239P-201ENST00000490061 300 ntBASIC6.4□□□□□ -1.38
NCK1P16333 RN7SL143P-201ENST00000496780 297 ntBASIC6.4□□□□□ -1.38
NCK1P16333 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
NCK1P16333 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC6.4□□□□□ -1.38
NCK1P16333 OXR1-212ENST00000521592 993 ntTSL 5 BASIC6.4□□□□□ -1.38
NCK1P16333 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC6.4□□□□□ -1.38
NCK1P16333 AC099687.1-201ENST00000531798 510 ntTSL 3 BASIC6.4□□□□□ -1.38
NCK1P16333 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
NCK1P16333 UBE2CP4-201ENST00000561405 535 ntBASIC6.4□□□□□ -1.38
NCK1P16333 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC6.4□□□□□ -1.38
NCK1P16333 BOLA2P1-201ENST00000584794 232 ntBASIC6.4□□□□□ -1.38
NCK1P16333 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
NCK1P16333 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC6.4□□□□□ -1.38
NCK1P16333 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
NCK1P16333 AC011487.2-201ENST00000600193 1228 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
NCK1P16333 AL035410.2-201ENST00000604963 864 ntBASIC6.4□□□□□ -1.38
NCK1P16333 AC113361.1-201ENST00000606683 543 ntBASIC6.4□□□□□ -1.38
NCK1P16333 FAM27E3-202ENST00000614611 340 ntBASIC6.4□□□□□ -1.38
NCK1P16333 AC010333.3-201ENST00000615100 402 ntBASIC6.4□□□□□ -1.38
NCK1P16333 Six3os1_1.1-201ENST00000620900 87 ntBASIC6.4□□□□□ -1.38
NCK1P16333 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC6.4□□□□□ -1.38
NCK1P16333 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.4□□□□□ -1.38
NCK1P16333 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
NCK1P16333 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
NCK1P16333 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.39
NCK1P16333 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.4□□□□□ -1.39
NCK1P16333 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
NCK1P16333 AC105749.1-201ENST00000631338 2008 ntBASIC6.4□□□□□ -1.39
NCK1P16333 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
NCK1P16333 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
NCK1P16333 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms