Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 OR5P3-201ENST00000328375 936 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
COL6A2P12110 TRAV35-201ENST00000390462 330 ntBASIC7.29□□□□□ -1.24
COL6A2P12110 GRXCR1-201ENST00000399770 991 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL6A2P12110 SUMO2P13-201ENST00000403109 272 ntBASIC7.29□□□□□ -1.24
COL6A2P12110 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC7.29□□□□□ -1.24
COL6A2P12110 AC008937.2-201ENST00000415589 619 ntTSL 3 BASIC7.29□□□□□ -1.24
COL6A2P12110 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC7.29□□□□□ -1.24
COL6A2P12110 MORF4L1P7-201ENST00000426038 703 ntBASIC7.29□□□□□ -1.24
COL6A2P12110 TRBV26OR9-2-201ENST00000432077 293 ntBASIC7.29□□□□□ -1.24
COL6A2P12110 GAS5-211ENST00000432536 959 ntTSL 2 BASIC7.29□□□□□ -1.24
COL6A2P12110 LINC01638-202ENST00000444114 637 ntTSL 2 BASIC7.29□□□□□ -1.24
COL6A2P12110 AL591438.2-201ENST00000452635 691 ntBASIC7.29□□□□□ -1.24
COL6A2P12110 AL390728.3-201ENST00000452704 270 ntBASIC7.29□□□□□ -1.24
COL6A2P12110 AC092687.2-201ENST00000452909 568 ntTSL 5 BASIC7.29□□□□□ -1.24
COL6A2P12110 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC7.29□□□□□ -1.24
COL6A2P12110 AC005515.1-201ENST00000456368 289 ntTSL 3 BASIC7.29□□□□□ -1.24
COL6A2P12110 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC7.29□□□□□ -1.24
COL6A2P12110 RN7SL587P-201ENST00000459853 281 ntBASIC7.29□□□□□ -1.24
COL6A2P12110 RN7SL325P-201ENST00000460434 283 ntBASIC7.29□□□□□ -1.24
COL6A2P12110 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC7.29□□□□□ -1.24
COL6A2P12110 AC104982.1-201ENST00000478775 574 ntBASIC7.29□□□□□ -1.24
COL6A2P12110 GRHL1-206ENST00000480736 572 ntTSL 4 BASIC7.29□□□□□ -1.24
COL6A2P12110 GGTA1P-204ENST00000488429 1104 ntBASIC7.29□□□□□ -1.24
COL6A2P12110 NMNAT1P4-201ENST00000505598 840 ntBASIC7.29□□□□□ -1.24
COL6A2P12110 AC103833.1-201ENST00000517442 172 ntBASIC7.29□□□□□ -1.24
COL6A2P12110 AC083843.1-201ENST00000521444 849 ntTSL 4 BASIC7.29□□□□□ -1.24
COL6A2P12110 AC104115.2-201ENST00000523026 687 ntBASIC7.29□□□□□ -1.24
COL6A2P12110 MORF4L1P3-201ENST00000525966 950 ntBASIC7.29□□□□□ -1.24
COL6A2P12110 DUXAP5-201ENST00000529668 529 ntBASIC7.29□□□□□ -1.24
COL6A2P12110 AP006587.2-201ENST00000530696 493 ntBASIC7.29□□□□□ -1.24
COL6A2P12110 AC023538.1-201ENST00000534576 736 ntBASIC7.29□□□□□ -1.24
COL6A2P12110 AC079866.1-201ENST00000534985 1220 ntBASIC7.29□□□□□ -1.24
COL6A2P12110 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC7.29□□□□□ -1.24
COL6A2P12110 DCN-215ENST00000550099 719 ntTSL 2 BASIC7.29□□□□□ -1.24
COL6A2P12110 NUTF2P2-201ENST00000551207 384 ntBASIC7.29□□□□□ -1.24
COL6A2P12110 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC7.29□□□□□ -1.24
COL6A2P12110 LINC01989-201ENST00000566930 1081 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
COL6A2P12110 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC7.29□□□□□ -1.24
COL6A2P12110 AC090286.3-201ENST00000573133 187 ntBASIC7.29□□□□□ -1.24
COL6A2P12110 AC018521.6-201ENST00000584276 335 ntTSL 5 BASIC7.29□□□□□ -1.24
COL6A2P12110 ZNF559-205ENST00000586255 1016 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
COL6A2P12110 PINLYP-206ENST00000599207 712 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
COL6A2P12110 AC093424.1-201ENST00000604999 338 ntBASIC7.29□□□□□ -1.24
COL6A2P12110 AL109918.2-201ENST00000605188 279 ntBASIC7.29□□□□□ -1.24
COL6A2P12110 MIR6751-201ENST00000610479 63 ntBASIC7.29□□□□□ -1.24
COL6A2P12110 AC093783.1-201ENST00000612976 329 ntBASIC7.29□□□□□ -1.24
COL6A2P12110 MIR6872-201ENST00000612981 62 ntBASIC7.29□□□□□ -1.24
COL6A2P12110 AL137246.2-201ENST00000613439 662 ntBASIC7.29□□□□□ -1.24
COL6A2P12110 AL445649.1-201ENST00000615941 691 ntBASIC7.29□□□□□ -1.24
COL6A2P12110 Metazoa_SRP.99-201ENST00000621370 254 ntBASIC7.29□□□□□ -1.24
COL6A2P12110 RPL36AP21-202ENST00000639134 430 ntBASIC7.29□□□□□ -1.24
COL6A2P12110 MFSD8-234ENST00000641503 1082 ntBASIC7.29□□□□□ -1.24
COL6A2P12110 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
COL6A2P12110 CDY7P-201ENST00000429883 1604 ntBASIC7.29□□□□□ -1.24
COL6A2P12110 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL6A2P12110 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL6A2P12110 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
COL6A2P12110 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC7.29□□□□□ -1.24
COL6A2P12110 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
COL6A2P12110 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL6A2P12110 FAM49A-201ENST00000381323 4670 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL6A2P12110 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC7.29□□□□□ -1.24
COL6A2P12110 FGL1-203ENST00000398054 1462 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
COL6A2P12110 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
COL6A2P12110 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC7.29□□□□□ -1.24
COL6A2P12110 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC7.29□□□□□ -1.24
COL6A2P12110 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL6A2P12110 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL6A2P12110 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
COL6A2P12110 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
COL6A2P12110 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
COL6A2P12110 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
COL6A2P12110 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
COL6A2P12110 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC7.28□□□□□ -1.24
COL6A2P12110 AC092821.3-202ENST00000641304 2767 ntBASIC7.28□□□□□ -1.24
COL6A2P12110 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL6A2P12110 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
COL6A2P12110 AC022507.1-201ENST00000548349 1505 ntBASIC7.28□□□□□ -1.24
COL6A2P12110 CASC19-243ENST00000641588 1546 ntBASIC7.28□□□□□ -1.24
COL6A2P12110 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL6A2P12110 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
COL6A2P12110 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
COL6A2P12110 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
COL6A2P12110 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC7.28□□□□□ -1.24
COL6A2P12110 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL6A2P12110 INSL5-201ENST00000304526 715 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL6A2P12110 HBS1L-202ENST00000367820 638 ntTSL 3 BASIC7.28□□□□□ -1.24
COL6A2P12110 PHACTR1-204ENST00000379348 795 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
COL6A2P12110 AC093642.1-201ENST00000412193 565 ntTSL 3 BASIC7.28□□□□□ -1.24
COL6A2P12110 LINC00159-202ENST00000414877 428 ntTSL 4 BASIC7.28□□□□□ -1.24
COL6A2P12110 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC7.28□□□□□ -1.24
COL6A2P12110 AL353611.1-201ENST00000417054 462 ntTSL 5 BASIC7.28□□□□□ -1.24
COL6A2P12110 AL593856.1-201ENST00000419949 805 ntBASIC7.28□□□□□ -1.24
COL6A2P12110 AC110995.1-202ENST00000422914 860 ntTSL 3 BASIC7.28□□□□□ -1.24
COL6A2P12110 AC008753.1-201ENST00000423096 284 ntBASIC7.28□□□□□ -1.24
COL6A2P12110 AL354983.1-201ENST00000434580 906 ntBASIC7.28□□□□□ -1.24
COL6A2P12110 ELOCP11-201ENST00000436690 332 ntBASIC7.28□□□□□ -1.24
COL6A2P12110 NANOGP9-201ENST00000439890 892 ntBASIC7.28□□□□□ -1.24
COL6A2P12110 LINC01284-201ENST00000442994 730 ntTSL 5 BASIC7.28□□□□□ -1.24
COL6A2P12110 ELOCP16-201ENST00000444494 332 ntBASIC7.28□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms