Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 MTND4P19-201ENST00000446659 478 ntBASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 IGBP1P3-201ENST00000447449 1000 ntBASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 NEURL1-AS1-201ENST00000447820 439 ntTSL 2 BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 Z95152.1-201ENST00000453556 656 ntBASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 RN7SL621P-201ENST00000472565 299 ntBASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 THUMPD3-AS1-205ENST00000481221 683 ntTSL 3 BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 RN7SL130P-201ENST00000489463 305 ntBASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 RN7SL598P-201ENST00000494391 294 ntBASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 AC023644.1-201ENST00000523380 859 ntTSL 5 BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 AC027779.1-201ENST00000530492 516 ntTSL 3 BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 AP006587.2-201ENST00000530696 493 ntBASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 AP000781.1-201ENST00000534162 311 ntTSL 3 BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 LINC00678-202ENST00000534757 798 ntTSL 3 BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 TMEM106C-212ENST00000549288 321 ntTSL 3 BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 AC087897.1-201ENST00000550134 156 ntBASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 DPPA3P2-202ENST00000557188 1219 ntBASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 AC005379.1-201ENST00000585647 328 ntTSL 2 BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 AP001269.3-201ENST00000588718 329 ntBASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 NUTM2B-AS1-209ENST00000596088 366 ntTSL 3 BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 KC877982.1-201ENST00000602313 470 ntBASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 AC119501.1-201ENST00000603646 475 ntBASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 IGKV1OR2-9-201ENST00000603957 287 ntBASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 IGKV1OR2-11-201ENST00000604120 287 ntBASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 AC128687.1-201ENST00000605304 619 ntBASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 AC112220.3-201ENST00000605502 502 ntBASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 AC023983.2-201ENST00000608010 562 ntBASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 AL121928.1-201ENST00000608017 521 ntBASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 AC097534.2-202ENST00000608794 587 ntTSL 2 BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 AC097534.2-201ENST00000609153 751 ntTSL 3 BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 AC244669.1-201ENST00000616141 715 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 AC244093.5-201ENST00000619606 718 ntTSL 4 BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 Metazoa_SRP.176-201ENST00000619772 282 ntBASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 AC010332.1-201ENST00000620439 97 ntBASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 C5orf56-207ENST00000621237 486 ntAPPRIS P5 TSL 2 BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 AC093495.1-212ENST00000630173 1162 ntTSL 5 BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 CPB1-208ENST00000491148 1773 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 TAF1-201ENST00000276072 5692 ntAPPRIS P3 TSL 5 BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 ZNF185-203ENST00000324823 3597 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 KCNJ15-205ENST00000398930 2914 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 AL133243.2-201ENST00000610331 1621 ntBASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 OR7A17-203ENST00000642123 3565 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 INTS7-202ENST00000366993 3422 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 ELF4-202ENST00000335997 4145 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 STXBP6-207ENST00000550887 1311 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 NUDT13-201ENST00000349051 1835 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 VPS4B-201ENST00000238497 3324 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 ANKFN1-202ENST00000566473 3840 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 MOBP-201ENST00000311042 3388 ntAPPRIS ALT2 TSL 2 BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 C1orf87-201ENST00000371201 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 CYP2C8-211ENST00000539050 2024 ntTSL 3 BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 IBSP-201ENST00000226284 1546 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 LINC01139-201ENST00000400946 1537 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 TPH2-201ENST00000333850 2360 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 ABCB1-211ENST00000622132 4778 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 PSD3-203ENST00000428502 6330 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 RNF14-203ENST00000394514 2905 ntTSL 2 BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 KCTD6-201ENST00000355076 2425 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 ZNF225-204ENST00000590612 2404 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 YIPF5-201ENST00000274496 3147 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 PIWIL3-202ENST00000527701 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 MCC-209ENST00000515367 3844 ntTSL 5 BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 MASP1-202ENST00000296280 4015 ntAPPRIS P4 TSL 1 (best) BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 HOOK3-201ENST00000307602 14398 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 WDR87-201ENST00000303868 8847 ntAPPRIS P3 TSL 2 BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 ITIH3-202ENST00000449956 3007 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 MBNL3-203ENST00000370849 1444 ntTSL 2 BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 AC005261.2-201ENST00000593427 4258 ntBASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 ZNF143-204ENST00000396604 2696 ntAPPRIS ALT1 TSL 5 BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 AC090229.1-201ENST00000590983 1609 ntBASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 MKL2-205ENST00000572567 2185 ntTSL 2 BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 AL080312.1-201ENST00000256654 824 ntBASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 RNA5SP145-201ENST00000363124 125 ntBASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 RNU5B-1-201ENST00000363286 116 ntBASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 Y_RNA.359-201ENST00000365498 102 ntBASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 IGKV6D-41-201ENST00000390271 371 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 TRBV7-5-201ENST00000390382 345 ntBASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 RN7SKP142-201ENST00000411236 328 ntBASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 AC023669.1-201ENST00000414915 524 ntTSL 3 BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 C1DP2-201ENST00000418167 426 ntBASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 FAM41AY1-201ENST00000421205 906 ntTSL 5 BASIC8.23□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms