Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 GPD2-203ENST00000409674 2397 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 COPS3-203ENST00000439936 1394 ntTSL 5 BASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 ANAPC5-204ENST00000441917 2147 ntTSL 5 BASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 AC091544.5-201ENST00000620192 3815 ntBASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 AC092111.1-201ENST00000618256 3358 ntBASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC7.28□□□□□ -1.24
TRIM48Q8IWZ4 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.24
TRIM48Q8IWZ4 LIMA1-216ENST00000552909 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.24
TRIM48Q8IWZ4 CUZD1-206ENST00000392790 2279 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
TRIM48Q8IWZ4 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC7.27□□□□□ -1.24
TRIM48Q8IWZ4 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC7.27□□□□□ -1.24
TRIM48Q8IWZ4 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 IL17F-201ENST00000336123 850 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 RNA5SP396-201ENST00000364834 120 ntBASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 RNU6-1257P-201ENST00000384625 110 ntBASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 AL355862.1-201ENST00000412705 353 ntBASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 AL024507.1-201ENST00000412741 274 ntBASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 AC020983.1-201ENST00000417063 543 ntBASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 AL365338.1-201ENST00000422282 858 ntBASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 MTND4LP13-201ENST00000425022 298 ntBASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 MED28P4-201ENST00000433137 572 ntBASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 NIP7P1-201ENST00000433227 512 ntBASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 AC245047.5-201ENST00000437312 556 ntBASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 MTCO2P20-201ENST00000437339 673 ntBASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 HMGB2-202ENST00000438704 1032 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 LIN28AP2-201ENST00000445283 458 ntBASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 MOB1AP2-201ENST00000446060 614 ntBASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 AL009048.1-201ENST00000450437 298 ntBASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 AL592464.2-201ENST00000457440 607 ntTSL 2 BASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 LINC01053-201ENST00000457628 771 ntTSL 2 BASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 AC018892.2-201ENST00000457656 693 ntBASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 RN7SL791P-201ENST00000467868 295 ntBASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 RPL5P15-201ENST00000475870 897 ntBASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 RBBP4P1-201ENST00000502424 1276 ntBASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 AC105202.1-203ENST00000518024 875 ntTSL 3 BASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 SFTA3-210ENST00000521945 1116 ntTSL 2 BASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 AP000880.1-202ENST00000526487 588 ntTSL 3 BASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 IGHV1OR15-3-201ENST00000564926 351 ntBASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 AC024614.1-201ENST00000577546 307 ntBASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 EXOSC3P2-201ENST00000594464 497 ntBASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 ZNF208-202ENST00000597040 781 ntTSL 2 BASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 AC106052.1-201ENST00000608029 497 ntBASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 OR7M1P-201ENST00000608946 533 ntBASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 AC080112.3-201ENST00000612552 880 ntBASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 FRG2MP-201ENST00000613317 856 ntBASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 AL590410.1-201ENST00000617925 333 ntBASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 AC126544.2-201ENST00000625174 749 ntBASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 FKBP1AP4-201ENST00000631775 336 ntBASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 AC103703.1-201ENST00000634783 663 ntBASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 EEF1A1P22-201ENST00000559385 1380 ntBASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 TMEM161BP1-201ENST00000457388 1457 ntBASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 DMD-211ENST00000378707 7410 ntTSL 5 BASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
TRIM48Q8IWZ4 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC7.27□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms