Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
CCDC27Q2M243 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC9.39□□□□□ -0.91
CCDC27Q2M243 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC9.39□□□□□ -0.91
CCDC27Q2M243 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC9.39□□□□□ -0.91
CCDC27Q2M243 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC9.39□□□□□ -0.91
CCDC27Q2M243 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC9.39□□□□□ -0.91
CCDC27Q2M243 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC9.39□□□□□ -0.91
CCDC27Q2M243 AC068802.1-201ENST00000603420 732 ntBASIC9.39□□□□□ -0.91
CCDC27Q2M243 AP005329.3-201ENST00000609924 686 ntBASIC9.39□□□□□ -0.91
CCDC27Q2M243 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
CCDC27Q2M243 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC9.39□□□□□ -0.91
CCDC27Q2M243 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
CCDC27Q2M243 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC9.39□□□□□ -0.91
CCDC27Q2M243 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
CCDC27Q2M243 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
CCDC27Q2M243 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CCDC27Q2M243 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CCDC27Q2M243 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC9.38□□□□□ -0.91
CCDC27Q2M243 EEF1A1P20-201ENST00000514852 1386 ntBASIC9.38□□□□□ -0.91
CCDC27Q2M243 AP003066.1-201ENST00000527528 1647 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
CCDC27Q2M243 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
CCDC27Q2M243 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
CCDC27Q2M243 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC9.38□□□□□ -0.91
CCDC27Q2M243 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CCDC27Q2M243 AC135012.3-201ENST00000599841 4039 ntTSL 4 BASIC9.38□□□□□ -0.91
CCDC27Q2M243 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
CCDC27Q2M243 AL929601.4-201ENST00000613011 1341 ntBASIC9.38□□□□□ -0.91
CCDC27Q2M243 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC9.38□□□□□ -0.91
CCDC27Q2M243 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC9.38□□□□□ -0.91
CCDC27Q2M243 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
CCDC27Q2M243 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC9.38□□□□□ -0.91
CCDC27Q2M243 RNU6-1331P-201ENST00000363658 106 ntBASIC9.38□□□□□ -0.91
CCDC27Q2M243 AL035405.1-201ENST00000400795 710 ntBASIC9.38□□□□□ -0.91
CCDC27Q2M243 RBM22P7-201ENST00000421321 280 ntBASIC9.38□□□□□ -0.91
CCDC27Q2M243 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC9.38□□□□□ -0.91
CCDC27Q2M243 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC9.38□□□□□ -0.91
CCDC27Q2M243 BX119917.1-201ENST00000432517 502 ntBASIC9.38□□□□□ -0.91
CCDC27Q2M243 LINC01638-202ENST00000444114 637 ntTSL 2 BASIC9.38□□□□□ -0.91
CCDC27Q2M243 DEFA11P-201ENST00000446470 261 ntBASIC9.38□□□□□ -0.91
CCDC27Q2M243 TVP23BP2-201ENST00000455082 615 ntBASIC9.38□□□□□ -0.91
CCDC27Q2M243 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC9.38□□□□□ -0.91
CCDC27Q2M243 RPS20-202ENST00000518875 671 ntTSL 2 BASIC9.38□□□□□ -0.91
CCDC27Q2M243 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC9.38□□□□□ -0.91
CCDC27Q2M243 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC9.38□□□□□ -0.91
CCDC27Q2M243 CD69-203ENST00000536709 1020 ntTSL 2 BASIC9.38□□□□□ -0.91
CCDC27Q2M243 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
CCDC27Q2M243 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC9.38□□□□□ -0.91
CCDC27Q2M243 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC9.38□□□□□ -0.91
CCDC27Q2M243 AL031846.1-201ENST00000560933 314 ntBASIC9.38□□□□□ -0.91
CCDC27Q2M243 AC091304.5-201ENST00000568969 158 ntBASIC9.38□□□□□ -0.91
CCDC27Q2M243 MIR1273F-201ENST00000580581 99 ntBASIC9.38□□□□□ -0.91
CCDC27Q2M243 AL133247.2-201ENST00000603236 482 ntBASIC9.38□□□□□ -0.91
CCDC27Q2M243 AL035417.2-201ENST00000603887 796 ntBASIC9.38□□□□□ -0.91
CCDC27Q2M243 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC9.38□□□□□ -0.91
CCDC27Q2M243 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
CCDC27Q2M243 AC143336.1-201ENST00000614164 836 ntBASIC9.38□□□□□ -0.91
CCDC27Q2M243 pRNA.9-201ENST00000618609 89 ntBASIC9.38□□□□□ -0.91
CCDC27Q2M243 AL163051.2-201ENST00000618976 735 ntBASIC9.38□□□□□ -0.91
CCDC27Q2M243 FKBP1AP4-201ENST00000631775 336 ntBASIC9.38□□□□□ -0.91
CCDC27Q2M243 MED6-212ENST00000615788 1700 ntTSL 5 BASIC9.38□□□□□ -0.91
CCDC27Q2M243 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
CCDC27Q2M243 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
CCDC27Q2M243 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.91
CCDC27Q2M243 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
CCDC27Q2M243 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
CCDC27Q2M243 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
CCDC27Q2M243 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
CCDC27Q2M243 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CCDC27Q2M243 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
CCDC27Q2M243 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC9.37□□□□□ -0.91
CCDC27Q2M243 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC9.37□□□□□ -0.91
CCDC27Q2M243 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
CCDC27Q2M243 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
CCDC27Q2M243 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
CCDC27Q2M243 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC9.37□□□□□ -0.91
CCDC27Q2M243 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
CCDC27Q2M243 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
CCDC27Q2M243 NRIR-201ENST00000366140 799 ntTSL 3 BASIC9.37□□□□□ -0.91
CCDC27Q2M243 MIR152-201ENST00000385212 87 ntBASIC9.37□□□□□ -0.91
CCDC27Q2M243 TRIM60P17-201ENST00000415181 719 ntBASIC9.37□□□□□ -0.91
CCDC27Q2M243 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC9.37□□□□□ -0.91
CCDC27Q2M243 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
CCDC27Q2M243 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC9.37□□□□□ -0.91
CCDC27Q2M243 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
CCDC27Q2M243 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC9.37□□□□□ -0.91
CCDC27Q2M243 BX323845.2-201ENST00000458382 234 ntBASIC9.37□□□□□ -0.91
CCDC27Q2M243 RN7SL325P-201ENST00000460434 283 ntBASIC9.37□□□□□ -0.91
CCDC27Q2M243 AC126615.1-201ENST00000470084 630 ntBASIC9.37□□□□□ -0.91
CCDC27Q2M243 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC9.37□□□□□ -0.91
CCDC27Q2M243 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC9.37□□□□□ -0.91
CCDC27Q2M243 HMGB1P47-201ENST00000511281 589 ntBASIC9.37□□□□□ -0.91
CCDC27Q2M243 OXR1-212ENST00000521592 993 ntTSL 5 BASIC9.37□□□□□ -0.91
CCDC27Q2M243 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC9.37□□□□□ -0.91
CCDC27Q2M243 SNHG14-217ENST00000552781 552 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
CCDC27Q2M243 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC9.37□□□□□ -0.91
CCDC27Q2M243 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC9.37□□□□□ -0.91
CCDC27Q2M243 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC9.37□□□□□ -0.91
CCDC27Q2M243 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC9.37□□□□□ -0.91
CCDC27Q2M243 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC9.37□□□□□ -0.91
CCDC27Q2M243 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC9.37□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms