Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC097381.3-201ENST00000608962 462 ntBASIC7.31□□□□□ -1.24
COL6A2P12110 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC7.31□□□□□ -1.24
COL6A2P12110 AC009159.2-201ENST00000617603 606 ntBASIC7.31□□□□□ -1.24
COL6A2P12110 AC007275.1-201ENST00000621243 671 ntBASIC7.31□□□□□ -1.24
COL6A2P12110 KDM5DP1-201ENST00000622542 298 ntBASIC7.31□□□□□ -1.24
COL6A2P12110 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC7.31□□□□□ -1.24
COL6A2P12110 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC7.31□□□□□ -1.24
COL6A2P12110 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
COL6A2P12110 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
COL6A2P12110 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC7.31□□□□□ -1.24
COL6A2P12110 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC7.31□□□□□ -1.24
COL6A2P12110 CADPS-220ENST00000613879 1804 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
COL6A2P12110 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
COL6A2P12110 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
COL6A2P12110 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
COL6A2P12110 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC7.31□□□□□ -1.24
COL6A2P12110 HELLS-206ENST00000394045 2699 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
COL6A2P12110 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC7.31□□□□□ -1.24
COL6A2P12110 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC7.3□□□□□ -1.24
COL6A2P12110 SF3A3P1-201ENST00000446317 1477 ntBASIC7.3□□□□□ -1.24
COL6A2P12110 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
COL6A2P12110 SPATA31C2-201ENST00000324915 3777 ntBASIC7.3□□□□□ -1.24
COL6A2P12110 COX7C-203ENST00000509578 1584 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
COL6A2P12110 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC7.3□□□□□ -1.24
COL6A2P12110 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC7.3□□□□□ -1.24
COL6A2P12110 OFD1P10Y-201ENST00000434110 1433 ntBASIC7.3□□□□□ -1.24
COL6A2P12110 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
COL6A2P12110 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
COL6A2P12110 AL078621.1-201ENST00000272567 768 ntBASIC7.3□□□□□ -1.24
COL6A2P12110 KRTAP19-6-201ENST00000334046 330 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
COL6A2P12110 RNA5SP218-201ENST00000363188 109 ntBASIC7.3□□□□□ -1.24
COL6A2P12110 NRIR-201ENST00000366140 799 ntTSL 3 BASIC7.3□□□□□ -1.24
COL6A2P12110 RGS8-203ENST00000367557 859 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
COL6A2P12110 RIT1-201ENST00000368322 855 ntTSL 3 BASIC7.3□□□□□ -1.24
COL6A2P12110 AC092952.1-201ENST00000397646 1209 ntBASIC7.3□□□□□ -1.24
COL6A2P12110 MTND4P13-201ENST00000402078 1023 ntBASIC7.3□□□□□ -1.24
COL6A2P12110 RN7SKP225-201ENST00000410405 352 ntBASIC7.3□□□□□ -1.24
COL6A2P12110 AC023141.10-201ENST00000415634 200 ntBASIC7.3□□□□□ -1.24
COL6A2P12110 GEMIN2P2-201ENST00000418195 715 ntBASIC7.3□□□□□ -1.24
COL6A2P12110 AC114752.2-201ENST00000424119 404 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
COL6A2P12110 ZNF736P7Y-201ENST00000425158 820 ntBASIC7.3□□□□□ -1.24
COL6A2P12110 AC068137.1-201ENST00000429272 584 ntBASIC7.3□□□□□ -1.24
COL6A2P12110 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC7.3□□□□□ -1.24
COL6A2P12110 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC7.3□□□□□ -1.24
COL6A2P12110 AC002066.1-202ENST00000439070 699 ntTSL 3 BASIC7.3□□□□□ -1.24
COL6A2P12110 AL021939.1-201ENST00000441868 886 ntBASIC7.3□□□□□ -1.24
COL6A2P12110 IGKV1OR10-1-201ENST00000442306 329 ntBASIC7.3□□□□□ -1.24
COL6A2P12110 XKRY2-201ENST00000442362 1093 ntBASIC7.3□□□□□ -1.24
COL6A2P12110 AC244021.2-201ENST00000445260 529 ntTSL 5 BASIC7.3□□□□□ -1.24
COL6A2P12110 CMAHP-203ENST00000458373 1101 ntTSL 5 BASIC7.3□□□□□ -1.24
COL6A2P12110 IGKV1OR22-5-201ENST00000458718 354 ntBASIC7.3□□□□□ -1.24
COL6A2P12110 AL035660.2-201ENST00000461248 556 ntTSL 2 BASIC7.3□□□□□ -1.24
COL6A2P12110 RPL23P10-201ENST00000468780 412 ntBASIC7.3□□□□□ -1.24
COL6A2P12110 RN7SL414P-201ENST00000469545 294 ntBASIC7.3□□□□□ -1.24
COL6A2P12110 METTL15P1-201ENST00000481421 1045 ntBASIC7.3□□□□□ -1.24
COL6A2P12110 AC008799.2-201ENST00000484429 647 ntBASIC7.3□□□□□ -1.24
COL6A2P12110 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC7.3□□□□□ -1.24
COL6A2P12110 HOXB-AS1-203ENST00000504972 680 ntTSL 3 BASIC7.3□□□□□ -1.24
COL6A2P12110 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC7.3□□□□□ -1.24
COL6A2P12110 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC7.3□□□□□ -1.24
COL6A2P12110 RNU2-45P-201ENST00000516068 187 ntBASIC7.3□□□□□ -1.24
COL6A2P12110 RN7SKP287-201ENST00000516546 266 ntBASIC7.3□□□□□ -1.24
COL6A2P12110 SUMO2P19-201ENST00000518920 295 ntBASIC7.3□□□□□ -1.24
COL6A2P12110 RPL10P18-201ENST00000519384 309 ntBASIC7.3□□□□□ -1.24
COL6A2P12110 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
COL6A2P12110 OR7E96P-201ENST00000530816 976 ntBASIC7.3□□□□□ -1.24
COL6A2P12110 OSBPL9P3-201ENST00000534523 595 ntBASIC7.3□□□□□ -1.24
COL6A2P12110 AP000619.1-201ENST00000540293 1000 ntBASIC7.3□□□□□ -1.24
COL6A2P12110 AC090888.2-201ENST00000559765 1144 ntBASIC7.3□□□□□ -1.24
COL6A2P12110 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC7.3□□□□□ -1.24
COL6A2P12110 FAM192A-206ENST00000564108 1055 ntAPPRIS P1 TSL 3 BASIC7.3□□□□□ -1.24
COL6A2P12110 MIR4642-201ENST00000583943 82 ntBASIC7.3□□□□□ -1.24
COL6A2P12110 AC097376.1-201ENST00000602907 997 ntBASIC7.3□□□□□ -1.24
COL6A2P12110 DIMT1P1-201ENST00000603970 763 ntBASIC7.3□□□□□ -1.24
COL6A2P12110 AC004852.1-201ENST00000605206 154 ntBASIC7.3□□□□□ -1.24
COL6A2P12110 AC117503.3-201ENST00000623811 601 ntBASIC7.3□□□□□ -1.24
COL6A2P12110 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC7.3□□□□□ -1.24
COL6A2P12110 ZNF502-201ENST00000296091 3270 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
COL6A2P12110 AP001157.1-201ENST00000550837 2339 ntBASIC7.3□□□□□ -1.24
COL6A2P12110 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC7.3□□□□□ -1.24
COL6A2P12110 AL357556.1-201ENST00000421884 1388 ntBASIC7.3□□□□□ -1.24
COL6A2P12110 AC092725.2-201ENST00000567658 1389 ntBASIC7.3□□□□□ -1.24
COL6A2P12110 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC7.3□□□□□ -1.24
COL6A2P12110 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
COL6A2P12110 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC7.3□□□□□ -1.24
COL6A2P12110 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC7.3□□□□□ -1.24
COL6A2P12110 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL6A2P12110 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL6A2P12110 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
COL6A2P12110 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC7.29□□□□□ -1.24
COL6A2P12110 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL6A2P12110 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL6A2P12110 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL6A2P12110 AC138915.4-201ENST00000565549 4147 ntBASIC7.29□□□□□ -1.24
COL6A2P12110 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL6A2P12110 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
COL6A2P12110 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL6A2P12110 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC7.29□□□□□ -1.24
COL6A2P12110 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
COL6A2P12110 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms