Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
FREM3P0C091 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
FREM3P0C091 AC005839.1-201ENST00000624148 3213 ntBASIC6.23□□□□□ -1.41
FREM3P0C091 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC6.23□□□□□ -1.41
FREM3P0C091 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC6.23□□□□□ -1.41
FREM3P0C091 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
FREM3P0C091 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
FREM3P0C091 AC122713.2-201ENST00000624942 3335 ntBASIC6.23□□□□□ -1.41
FREM3P0C091 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
FREM3P0C091 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
FREM3P0C091 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC6.23□□□□□ -1.41
FREM3P0C091 AL121916.1-201ENST00000429405 308 ntBASIC6.23□□□□□ -1.41
FREM3P0C091 AL445991.1-201ENST00000450381 475 ntBASIC6.23□□□□□ -1.41
FREM3P0C091 VNN3-210ENST00000450865 596 ntTSL 4 BASIC6.23□□□□□ -1.41
FREM3P0C091 RPL9P15-201ENST00000491096 532 ntBASIC6.23□□□□□ -1.41
FREM3P0C091 NACAP5-201ENST00000509863 636 ntBASIC6.23□□□□□ -1.41
FREM3P0C091 AC091849.1-201ENST00000509920 121 ntBASIC6.23□□□□□ -1.41
FREM3P0C091 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC6.23□□□□□ -1.41
FREM3P0C091 AL365223.1-201ENST00000574864 1297 ntBASIC6.23□□□□□ -1.41
FREM3P0C091 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC6.23□□□□□ -1.41
FREM3P0C091 CTSLP2-201ENST00000580501 394 ntBASIC6.23□□□□□ -1.41
FREM3P0C091 AC011921.2-201ENST00000589465 152 ntBASIC6.23□□□□□ -1.41
FREM3P0C091 AC183089.2-201ENST00000637931 916 ntBASIC6.23□□□□□ -1.41
FREM3P0C091 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
FREM3P0C091 USP3-201ENST00000268049 5311 ntTSL 5 BASIC6.23□□□□□ -1.41
FREM3P0C091 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
FREM3P0C091 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
FREM3P0C091 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
FREM3P0C091 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
FREM3P0C091 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
FREM3P0C091 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
FREM3P0C091 RNA5SP172-201ENST00000365061 118 ntBASIC6.22□□□□□ -1.41
FREM3P0C091 AL353133.1-201ENST00000407695 401 ntBASIC6.22□□□□□ -1.41
FREM3P0C091 OR52N3P-201ENST00000413417 934 ntBASIC6.22□□□□□ -1.41
FREM3P0C091 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
FREM3P0C091 HMGN1P32-201ENST00000441744 256 ntBASIC6.22□□□□□ -1.41
FREM3P0C091 AC002486.2-201ENST00000447806 590 ntBASIC6.22□□□□□ -1.41
FREM3P0C091 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
FREM3P0C091 RN7SKP183-201ENST00000517169 324 ntBASIC6.22□□□□□ -1.41
FREM3P0C091 AC024267.2-201ENST00000582737 417 ntBASIC6.22□□□□□ -1.41
FREM3P0C091 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC6.22□□□□□ -1.41
FREM3P0C091 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC6.22□□□□□ -1.41
FREM3P0C091 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC6.22□□□□□ -1.41
FREM3P0C091 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC6.22□□□□□ -1.41
FREM3P0C091 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC6.22□□□□□ -1.41
FREM3P0C091 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
FREM3P0C091 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
FREM3P0C091 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
FREM3P0C091 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.22□□□□□ -1.41
FREM3P0C091 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC6.22□□□□□ -1.41
FREM3P0C091 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC6.22□□□□□ -1.41
FREM3P0C091 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC6.22□□□□□ -1.41
FREM3P0C091 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
FREM3P0C091 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC6.22□□□□□ -1.41
FREM3P0C091 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
FREM3P0C091 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
FREM3P0C091 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC6.22□□□□□ -1.41
FREM3P0C091 MAPK10-371ENST00000641952 5209 ntBASIC6.22□□□□□ -1.41
FREM3P0C091 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
FREM3P0C091 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC6.22□□□□□ -1.41
FREM3P0C091 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.22□□□□□ -1.41
FREM3P0C091 RN7SKP47-201ENST00000365347 328 ntBASIC6.22□□□□□ -1.41
FREM3P0C091 NRIR-201ENST00000366140 799 ntTSL 3 BASIC6.22□□□□□ -1.41
FREM3P0C091 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC6.22□□□□□ -1.41
FREM3P0C091 GRIK1-AS1-202ENST00000412579 818 ntTSL 5 BASIC6.22□□□□□ -1.41
FREM3P0C091 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.22□□□□□ -1.41
FREM3P0C091 GAPDHP57-201ENST00000424400 585 ntBASIC6.22□□□□□ -1.41
FREM3P0C091 AC091390.2-201ENST00000432573 374 ntBASIC6.22□□□□□ -1.41
FREM3P0C091 AC234771.4-201ENST00000441416 730 ntBASIC6.22□□□□□ -1.41
FREM3P0C091 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC6.22□□□□□ -1.41
FREM3P0C091 AC063955.1-201ENST00000462872 685 ntBASIC6.22□□□□□ -1.41
FREM3P0C091 AC116917.1-201ENST00000520558 305 ntBASIC6.22□□□□□ -1.41
FREM3P0C091 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC6.22□□□□□ -1.41
FREM3P0C091 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC6.22□□□□□ -1.41
FREM3P0C091 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC6.22□□□□□ -1.41
FREM3P0C091 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC6.22□□□□□ -1.41
FREM3P0C091 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC6.22□□□□□ -1.41
FREM3P0C091 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC6.22□□□□□ -1.41
FREM3P0C091 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC6.22□□□□□ -1.41
FREM3P0C091 RAB28P4-201ENST00000622233 665 ntBASIC6.22□□□□□ -1.41
FREM3P0C091 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC6.22□□□□□ -1.41
FREM3P0C091 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC6.22□□□□□ -1.41
FREM3P0C091 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
FREM3P0C091 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.41
FREM3P0C091 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.41
FREM3P0C091 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC6.21□□□□□ -1.41
FREM3P0C091 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
FREM3P0C091 DZANK1-203ENST00000357236 3739 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
FREM3P0C091 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
FREM3P0C091 MEP1B-204ENST00000581447 2308 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
FREM3P0C091 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
FREM3P0C091 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC6.21□□□□□ -1.41
FREM3P0C091 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.21□□□□□ -1.41
FREM3P0C091 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
FREM3P0C091 PARP9-202ENST00000462315 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
FREM3P0C091 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
FREM3P0C091 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
FREM3P0C091 CXCR2-201ENST00000318507 2879 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
FREM3P0C091 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
FREM3P0C091 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms