Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
NPIPA3F8WFD2 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.39
NPIPA3F8WFD2 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
NPIPA3F8WFD2 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
NPIPA3F8WFD2 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
NPIPA3F8WFD2 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
NPIPA3F8WFD2 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
NPIPA3F8WFD2 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
NPIPA3F8WFD2 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
NPIPA3F8WFD2 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
NPIPA3F8WFD2 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC6.39□□□□□ -1.39
NPIPA3F8WFD2 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC6.39□□□□□ -1.39
NPIPA3F8WFD2 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC6.39□□□□□ -1.39
NPIPA3F8WFD2 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC6.39□□□□□ -1.39
NPIPA3F8WFD2 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
NPIPA3F8WFD2 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
NPIPA3F8WFD2 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
NPIPA3F8WFD2 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC6.39□□□□□ -1.39
NPIPA3F8WFD2 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC6.39□□□□□ -1.39
NPIPA3F8WFD2 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
NPIPA3F8WFD2 OR5D18-201ENST00000333976 991 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
NPIPA3F8WFD2 RNU6-1017P-201ENST00000363613 106 ntBASIC6.39□□□□□ -1.39
NPIPA3F8WFD2 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC6.39□□□□□ -1.39
NPIPA3F8WFD2 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
NPIPA3F8WFD2 AL034417.1-201ENST00000399343 800 ntBASIC6.39□□□□□ -1.39
NPIPA3F8WFD2 GSTA6P-201ENST00000424144 582 ntBASIC6.39□□□□□ -1.39
NPIPA3F8WFD2 FTH1P10-202ENST00000430907 550 ntBASIC6.39□□□□□ -1.39
NPIPA3F8WFD2 PRDX1P1-201ENST00000449329 596 ntBASIC6.39□□□□□ -1.39
NPIPA3F8WFD2 CEACAMP11-201ENST00000455211 583 ntBASIC6.39□□□□□ -1.39
NPIPA3F8WFD2 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC6.39□□□□□ -1.39
NPIPA3F8WFD2 AC055758.2-201ENST00000495382 799 ntTSL 2 BASIC6.39□□□□□ -1.39
NPIPA3F8WFD2 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC6.39□□□□□ -1.39
NPIPA3F8WFD2 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC6.39□□□□□ -1.39
NPIPA3F8WFD2 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC6.39□□□□□ -1.39
NPIPA3F8WFD2 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC6.39□□□□□ -1.39
NPIPA3F8WFD2 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC6.39□□□□□ -1.39
NPIPA3F8WFD2 AC021820.1-201ENST00000525564 808 ntBASIC6.39□□□□□ -1.39
NPIPA3F8WFD2 OR4A1P-201ENST00000532342 920 ntBASIC6.39□□□□□ -1.39
NPIPA3F8WFD2 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC6.39□□□□□ -1.39
NPIPA3F8WFD2 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC6.39□□□□□ -1.39
NPIPA3F8WFD2 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC6.39□□□□□ -1.39
NPIPA3F8WFD2 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC6.39□□□□□ -1.39
NPIPA3F8WFD2 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC6.39□□□□□ -1.39
NPIPA3F8WFD2 AC104184.1-201ENST00000607513 721 ntBASIC6.39□□□□□ -1.39
NPIPA3F8WFD2 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC6.39□□□□□ -1.39
NPIPA3F8WFD2 AC025287.2-201ENST00000621911 668 ntBASIC6.39□□□□□ -1.39
NPIPA3F8WFD2 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC6.39□□□□□ -1.39
NPIPA3F8WFD2 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.39□□□□□ -1.39
NPIPA3F8WFD2 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.39□□□□□ -1.39
NPIPA3F8WFD2 RBPJP6-201ENST00000411556 1431 ntBASIC6.39□□□□□ -1.39
NPIPA3F8WFD2 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC6.39□□□□□ -1.39
NPIPA3F8WFD2 TMEM59-204ENST00000371344 2473 ntTSL 2 BASIC6.39□□□□□ -1.39
NPIPA3F8WFD2 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC6.39□□□□□ -1.39
NPIPA3F8WFD2 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
NPIPA3F8WFD2 AC011592.1-201ENST00000624647 3634 ntBASIC6.39□□□□□ -1.39
NPIPA3F8WFD2 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
NPIPA3F8WFD2 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
NPIPA3F8WFD2 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
NPIPA3F8WFD2 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC6.39□□□□□ -1.39
NPIPA3F8WFD2 MED6-212ENST00000615788 1700 ntTSL 5 BASIC6.39□□□□□ -1.39
NPIPA3F8WFD2 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.39□□□□□ -1.39
NPIPA3F8WFD2 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC6.39□□□□□ -1.39
NPIPA3F8WFD2 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NPIPA3F8WFD2 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.38□□□□□ -1.39
NPIPA3F8WFD2 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC6.38□□□□□ -1.39
NPIPA3F8WFD2 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.38□□□□□ -1.39
NPIPA3F8WFD2 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
NPIPA3F8WFD2 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NPIPA3F8WFD2 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
NPIPA3F8WFD2 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NPIPA3F8WFD2 RN7SKP77-201ENST00000363261 353 ntBASIC6.38□□□□□ -1.39
NPIPA3F8WFD2 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC6.38□□□□□ -1.39
NPIPA3F8WFD2 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC6.38□□□□□ -1.39
NPIPA3F8WFD2 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
NPIPA3F8WFD2 LDHAP5-201ENST00000394996 622 ntBASIC6.38□□□□□ -1.39
NPIPA3F8WFD2 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC6.38□□□□□ -1.39
NPIPA3F8WFD2 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC6.38□□□□□ -1.39
NPIPA3F8WFD2 VDAC1P2-201ENST00000423609 850 ntBASIC6.38□□□□□ -1.39
NPIPA3F8WFD2 AL589794.1-201ENST00000424971 390 ntBASIC6.38□□□□□ -1.39
NPIPA3F8WFD2 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC6.38□□□□□ -1.39
NPIPA3F8WFD2 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC6.38□□□□□ -1.39
NPIPA3F8WFD2 HMGN1P32-201ENST00000441744 256 ntBASIC6.38□□□□□ -1.39
NPIPA3F8WFD2 AL356121.1-201ENST00000442911 156 ntBASIC6.38□□□□□ -1.39
NPIPA3F8WFD2 AC022080.2-201ENST00000452932 533 ntBASIC6.38□□□□□ -1.39
NPIPA3F8WFD2 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC6.38□□□□□ -1.39
NPIPA3F8WFD2 AP005202.1-201ENST00000489915 867 ntBASIC6.38□□□□□ -1.39
NPIPA3F8WFD2 PFN2-217ENST00000498307 556 ntTSL 4 BASIC6.38□□□□□ -1.39
NPIPA3F8WFD2 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC6.38□□□□□ -1.39
NPIPA3F8WFD2 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC6.38□□□□□ -1.39
NPIPA3F8WFD2 CASC11-203ENST00000519071 791 ntTSL 3 BASIC6.38□□□□□ -1.39
NPIPA3F8WFD2 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC6.38□□□□□ -1.39
NPIPA3F8WFD2 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC6.38□□□□□ -1.39
NPIPA3F8WFD2 MIR4312-201ENST00000579909 76 ntBASIC6.38□□□□□ -1.39
NPIPA3F8WFD2 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC6.38□□□□□ -1.39
NPIPA3F8WFD2 RN7SL126P-201ENST00000616400 299 ntBASIC6.38□□□□□ -1.39
NPIPA3F8WFD2 HTR1DP1-201ENST00000616500 888 ntBASIC6.38□□□□□ -1.39
NPIPA3F8WFD2 AC073263.3-201ENST00000624449 858 ntBASIC6.38□□□□□ -1.39
NPIPA3F8WFD2 AL049541.2-201ENST00000626377 555 ntBASIC6.38□□□□□ -1.39
NPIPA3F8WFD2 CASC19-232ENST00000641480 1244 ntBASIC6.38□□□□□ -1.39
NPIPA3F8WFD2 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms