Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC10.01□□□□□ -0.81
HFM1A2PYH4 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC10.01□□□□□ -0.81
HFM1A2PYH4 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC10.01□□□□□ -0.81
HFM1A2PYH4 OR1L8-202ENST00000641027 2024 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
HFM1A2PYH4 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
HFM1A2PYH4 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
HFM1A2PYH4 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
HFM1A2PYH4 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
HFM1A2PYH4 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC10.01□□□□□ -0.81
HFM1A2PYH4 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
HFM1A2PYH4 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
HFM1A2PYH4 AL121722.1-201ENST00000638550 4849 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
HFM1A2PYH4 EML5-201ENST00000380664 5910 ntTSL 5 BASIC10.01□□□□□ -0.81
HFM1A2PYH4 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
HFM1A2PYH4 AC217777.1-201ENST00000570034 1471 ntBASIC10.01□□□□□ -0.81
HFM1A2PYH4 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
HFM1A2PYH4 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
HFM1A2PYH4 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
HFM1A2PYH4 PPBPP2-201ENST00000513150 1362 ntBASIC10.01□□□□□ -0.81
HFM1A2PYH4 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
HFM1A2PYH4 RN7SKP188-201ENST00000410789 317 ntBASIC10□□□□□ -0.81
HFM1A2PYH4 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC10□□□□□ -0.81
HFM1A2PYH4 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC10□□□□□ -0.81
HFM1A2PYH4 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
HFM1A2PYH4 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC10□□□□□ -0.81
HFM1A2PYH4 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC10□□□□□ -0.81
HFM1A2PYH4 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC10□□□□□ -0.81
HFM1A2PYH4 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC10□□□□□ -0.81
HFM1A2PYH4 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC10□□□□□ -0.81
HFM1A2PYH4 ANP32BP1-202ENST00000568553 737 ntBASIC10□□□□□ -0.81
HFM1A2PYH4 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC10□□□□□ -0.81
HFM1A2PYH4 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC10□□□□□ -0.81
HFM1A2PYH4 WBP1LP11-201ENST00000586141 328 ntBASIC10□□□□□ -0.81
HFM1A2PYH4 AC004805.3-201ENST00000603178 310 ntBASIC10□□□□□ -0.81
HFM1A2PYH4 MIR7109-201ENST00000613748 65 ntBASIC10□□□□□ -0.81
HFM1A2PYH4 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC10□□□□□ -0.81
HFM1A2PYH4 AL132796.3-201ENST00000624703 900 ntBASIC10□□□□□ -0.81
HFM1A2PYH4 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC10□□□□□ -0.81
HFM1A2PYH4 TEX41-271ENST00000628213 993 ntTSL 5 BASIC10□□□□□ -0.81
HFM1A2PYH4 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC10□□□□□ -0.81
HFM1A2PYH4 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
HFM1A2PYH4 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
HFM1A2PYH4 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
HFM1A2PYH4 AC062029.1-202ENST00000606164 3651 ntBASIC10□□□□□ -0.81
HFM1A2PYH4 FAT1-212ENST00000614102 14758 ntAPPRIS ALT1 TSL 5 BASIC10□□□□□ -0.81
HFM1A2PYH4 COG2-209ENST00000534989 2963 ntTSL 2 BASIC10□□□□□ -0.81
HFM1A2PYH4 AP001043.1-202ENST00000380931 5027 ntTSL 2 BASIC10□□□□□ -0.81
HFM1A2PYH4 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
HFM1A2PYH4 ABI1-206ENST00000376140 1446 ntTSL 5 BASIC10□□□□□ -0.81
HFM1A2PYH4 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
HFM1A2PYH4 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC10□□□□□ -0.81
HFM1A2PYH4 FGG-201ENST00000336098 1659 ntTSL 2 BASIC10□□□□□ -0.81
HFM1A2PYH4 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC10□□□□□ -0.81
HFM1A2PYH4 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
HFM1A2PYH4 AP005139.1-201ENST00000580702 1647 ntBASIC10□□□□□ -0.81
HFM1A2PYH4 ZNF846-202ENST00000586293 1621 ntTSL 1 (best) BASIC10□□□□□ -0.81
HFM1A2PYH4 KIF1B-211ENST00000620295 8624 ntTSL 1 (best) BASIC10□□□□□ -0.81
HFM1A2PYH4 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
HFM1A2PYH4 OAT-208ENST00000539214 1864 ntTSL 1 (best) BASIC10□□□□□ -0.81
HFM1A2PYH4 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC10□□□□□ -0.81
HFM1A2PYH4 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
HFM1A2PYH4 ADGRL3-213ENST00000509896 5069 ntTSL 5 BASIC10□□□□□ -0.81
HFM1A2PYH4 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
HFM1A2PYH4 SNORA64.3-201ENST00000365647 134 ntBASIC9.99□□□□□ -0.81
HFM1A2PYH4 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC9.99□□□□□ -0.81
HFM1A2PYH4 RPL37P23-201ENST00000492641 294 ntBASIC9.99□□□□□ -0.81
HFM1A2PYH4 B4GALNT2P1-201ENST00000508857 307 ntBASIC9.99□□□□□ -0.81
HFM1A2PYH4 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC9.99□□□□□ -0.81
HFM1A2PYH4 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC9.99□□□□□ -0.81
HFM1A2PYH4 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC9.99□□□□□ -0.81
HFM1A2PYH4 AC011921.2-201ENST00000589465 152 ntBASIC9.99□□□□□ -0.81
HFM1A2PYH4 Six3os1_4.1-201ENST00000615706 324 ntBASIC9.99□□□□□ -0.81
HFM1A2PYH4 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC9.99□□□□□ -0.81
HFM1A2PYH4 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC9.99□□□□□ -0.81
HFM1A2PYH4 AC068213.1-201ENST00000625124 226 ntBASIC9.99□□□□□ -0.81
HFM1A2PYH4 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
HFM1A2PYH4 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC9.99□□□□□ -0.81
HFM1A2PYH4 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
HFM1A2PYH4 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
HFM1A2PYH4 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
HFM1A2PYH4 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
HFM1A2PYH4 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC9.99□□□□□ -0.81
HFM1A2PYH4 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
HFM1A2PYH4 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
HFM1A2PYH4 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC9.99□□□□□ -0.81
HFM1A2PYH4 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC9.99□□□□□ -0.81
HFM1A2PYH4 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
HFM1A2PYH4 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC9.99□□□□□ -0.81
HFM1A2PYH4 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC9.99□□□□□ -0.81
HFM1A2PYH4 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC9.99□□□□□ -0.81
HFM1A2PYH4 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC9.99□□□□□ -0.81
HFM1A2PYH4 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
HFM1A2PYH4 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
HFM1A2PYH4 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
HFM1A2PYH4 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
HFM1A2PYH4 AL663061.1-201ENST00000416625 580 ntBASIC9.99□□□□□ -0.81
HFM1A2PYH4 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC9.99□□□□□ -0.81
HFM1A2PYH4 RPS7P12-201ENST00000422385 582 ntBASIC9.99□□□□□ -0.81
HFM1A2PYH4 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC9.99□□□□□ -0.81
HFM1A2PYH4 AL020997.1-201ENST00000446554 349 ntBASIC9.99□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 140.1 ms