| MUC1 | P15941 | ANXA2P2-201 | ENST00000435128 | 1020 nt | BASIC | 6.01 | □□□□□ -1.45 | | |
| MUC1 | P15941 | LINC01013-203 | ENST00000443303 | 569 nt | TSL 1 (best) BASIC | 6.01 | □□□□□ -1.45 | | |
| MUC1 | P15941 | CYCSP44-201 | ENST00000448560 | 313 nt | BASIC | 6.01 | □□□□□ -1.45 | | |
| MUC1 | P15941 | GAPVD1-215 | ENST00000470056 | 8923 nt | TSL 5 BASIC | 6.01 | □□□□□ -1.45 | | |
| MUC1 | P15941 | RPL5P15-201 | ENST00000475870 | 897 nt | BASIC | 6.01 | □□□□□ -1.45 | | |
| MUC1 | P15941 | HLTF-AS1-201 | ENST00000492461 | 415 nt | TSL 3 BASIC | 6.01 | □□□□□ -1.45 | | |
| MUC1 | P15941 | AC113383.1-205 | ENST00000502253 | 792 nt | TSL 2 BASIC | 6.01 | □□□□□ -1.45 | | |
| MUC1 | P15941 | FBXO16-208 | ENST00000519471 | 398 nt | TSL 2 BASIC | 6.01 | □□□□□ -1.45 | | |
| MUC1 | P15941 | AP003084.1-201 | ENST00000524828 | 742 nt | BASIC | 6.01 | □□□□□ -1.45 | | |
| MUC1 | P15941 | AC010247.1-201 | ENST00000527895 | 759 nt | TSL 1 (best) BASIC | 6.01 | □□□□□ -1.45 | | |
| MUC1 | P15941 | OR5M4P-201 | ENST00000529436 | 925 nt | BASIC | 6.01 | □□□□□ -1.45 | | |
| MUC1 | P15941 | LINC02259-202 | ENST00000565543 | 438 nt | TSL 2 BASIC | 6.01 | □□□□□ -1.45 | | |
| MUC1 | P15941 | RN7SL697P-201 | ENST00000582484 | 299 nt | BASIC | 6.01 | □□□□□ -1.45 | | |
| MUC1 | P15941 | AC009950.1-209 | ENST00000595586 | 777 nt | TSL 5 BASIC | 6.01 | □□□□□ -1.45 | | |
| MUC1 | P15941 | AL035417.2-201 | ENST00000603887 | 796 nt | BASIC | 6.01 | □□□□□ -1.45 | | |
| MUC1 | P15941 | AL591686.2-201 | ENST00000608241 | 475 nt | TSL 4 BASIC | 6.01 | □□□□□ -1.45 | | |
| MUC1 | P15941 | AL669942.1-206 | ENST00000610473 | 783 nt | TSL 3 BASIC | 6.01 | □□□□□ -1.45 | | |
| MUC1 | P15941 | FAM13A-AS1_2.1-201 | ENST00000611121 | 108 nt | BASIC | 6.01 | □□□□□ -1.45 | | |
| MUC1 | P15941 | AC016542.3-201 | ENST00000623520 | 619 nt | BASIC | 6.01 | □□□□□ -1.45 | | |
| MUC1 | P15941 | MIR7515HG-257 | ENST00000625915 | 852 nt | TSL 5 BASIC | 6.01 | □□□□□ -1.45 | | |
| MUC1 | P15941 | SGO1-AS1-206 | ENST00000635369 | 442 nt | TSL 5 BASIC | 6.01 | □□□□□ -1.45 | | |
| MUC1 | P15941 | OR5P3-202 | ENST00000641167 | 1193 nt | APPRIS P1 BASIC | 6.01 | □□□□□ -1.45 | | |
| MUC1 | P15941 | CEP152-201 | ENST00000325747 | 4986 nt | APPRIS ALT2 TSL 1 (best) BASIC | 6.01 | □□□□□ -1.45 | | |
| MUC1 | P15941 | MAPK10-357 | ENST00000641831 | 2858 nt | BASIC | 6.01 | □□□□□ -1.45 | | |
| MUC1 | P15941 | ZC3H8-202 | ENST00000409573 | 5965 nt | APPRIS P2 TSL 5 BASIC | 6.01 | □□□□□ -1.45 | | |
| MUC1 | P15941 | MYO5A-209 | ENST00000553916 | 5989 nt | TSL 5 BASIC | 6.01 | □□□□□ -1.45 | | |
| MUC1 | P15941 | BRCA1-210 | ENST00000471181 | 5936 nt | TSL 1 (best) BASIC | 6.01 | □□□□□ -1.45 | | |
| MUC1 | P15941 | AMD1-203 | ENST00000368882 | 3059 nt | TSL 2 BASIC | 6.01 | □□□□□ -1.45 | | |
| MUC1 | P15941 | BNC1-202 | ENST00000569704 | 3169 nt | APPRIS ALT2 TSL 5 BASIC | 6.01 | □□□□□ -1.45 | | |
| MUC1 | P15941 | RDH11-203 | ENST00000553384 | 1926 nt | TSL 1 (best) BASIC | 6.01 | □□□□□ -1.45 | | |
| MUC1 | P15941 | TMEM68-219 | ENST00000617977 | 4512 nt | TSL 5 BASIC | 6.01 | □□□□□ -1.45 | | |
| MUC1 | P15941 | DCLK1-208 | ENST00000615680 | 7592 nt | TSL 2 BASIC | 6.01 | □□□□□ -1.45 | | |
| MUC1 | P15941 | PCDH11Y-204 | ENST00000400457 | 9039 nt | APPRIS P5 TSL 1 (best) BASIC | 6.01 | □□□□□ -1.45 | | |
| MUC1 | P15941 | IL20-202 | ENST00000367098 | 1553 nt | APPRIS P1 TSL 1 (best) BASIC | 6.01 | □□□□□ -1.45 | | |
| MUC1 | P15941 | FRS2-209 | ENST00000550389 | 6600 nt | APPRIS P1 TSL 1 (best) BASIC | 6.01 | □□□□□ -1.45 | | |
| MUC1 | P15941 | ZNF23-207 | ENST00000564528 | 3020 nt | APPRIS ALT2 TSL 2 BASIC | 6.01 | □□□□□ -1.45 | | |
| MUC1 | P15941 | ALG11-202 | ENST00000521508 | 2558 nt | APPRIS P1 TSL 1 (best) BASIC | 6.01 | □□□□□ -1.45 | | |
| MUC1 | P15941 | FSHR-202 | ENST00000406846 | 2784 nt | APPRIS P4 TSL 1 (best) BASIC | 6.01 | □□□□□ -1.45 | | |
| MUC1 | P15941 | RAB5B-201 | ENST00000360299 | 5340 nt | APPRIS P1 TSL 1 (best) BASIC | 6.01 | □□□□□ -1.45 | | |
| MUC1 | P15941 | FRMD7-202 | ENST00000370879 | 2864 nt | TSL 1 (best) BASIC | 6 | □□□□□ -1.45 | | |
| MUC1 | P15941 | ZNF610-202 | ENST00000327920 | 1855 nt | APPRIS P3 TSL 2 BASIC | 6 | □□□□□ -1.45 | | |
| MUC1 | P15941 | KCTD4-201 | ENST00000379108 | 1865 nt | APPRIS P1 BASIC | 6 | □□□□□ -1.45 | | |
| MUC1 | P15941 | MSH6-209 | ENST00000538136 | 4055 nt | TSL 2 BASIC | 6 | □□□□□ -1.45 | | |
| MUC1 | P15941 | PBRM1-202 | ENST00000337303 | 4825 nt | APPRIS ALT1 TSL 1 (best) BASIC | 6 | □□□□□ -1.45 | | |
| MUC1 | P15941 | PWRN1-212 | ENST00000569908 | 1435 nt | BASIC | 6 | □□□□□ -1.45 | | |
| MUC1 | P15941 | BTN3A2-205 | ENST00000508906 | 3733 nt | APPRIS ALT2 TSL 2 BASIC | 6 | □□□□□ -1.45 | | |
| MUC1 | P15941 | THSD7B-202 | ENST00000409968 | 6111 nt | APPRIS P2 TSL 5 BASIC | 6 | □□□□□ -1.45 | | |
| MUC1 | P15941 | JPX-212 | ENST00000639185 | 9658 nt | TSL 5 BASIC | 6 | □□□□□ -1.45 | | |
| MUC1 | P15941 | ZNF14-201 | ENST00000344099 | 2949 nt | APPRIS P1 TSL 1 (best) BASIC | 6 | □□□□□ -1.45 | | |
| MUC1 | P15941 | CR1-203 | ENST00000367051 | 7469 nt | TSL 5 BASIC | 6 | □□□□□ -1.45 | | |
| MUC1 | P15941 | NACA-203 | ENST00000454682 | 6629 nt | TSL 5 BASIC | 6 | □□□□□ -1.45 | | |
| MUC1 | P15941 | OR52N5-202 | ENST00000641181 | 2778 nt | APPRIS P1 BASIC | 6 | □□□□□ -1.45 | | |
| MUC1 | P15941 | OAS2-201 | ENST00000342315 | 3613 nt | APPRIS P3 TSL 1 (best) BASIC | 6 | □□□□□ -1.45 | | |
| MUC1 | P15941 | CHD2-208 | ENST00000626874 | 7764 nt | TSL 1 (best) BASIC | 6 | □□□□□ -1.45 | | |
| MUC1 | P15941 | RNU4-81P-201 | ENST00000363561 | 144 nt | BASIC | 6 | □□□□□ -1.45 | | |
| MUC1 | P15941 | C6orf106-201 | ENST00000374021 | 916 nt | APPRIS ALT2 TSL 3 BASIC | 6 | □□□□□ -1.45 | | |
| MUC1 | P15941 | LINC01687-203 | ENST00000420255 | 897 nt | TSL 1 (best) BASIC | 6 | □□□□□ -1.45 | | |
| MUC1 | P15941 | HCG25-217 | ENST00000422366 | 702 nt | TSL 3 BASIC | 6 | □□□□□ -1.45 | | |
| MUC1 | P15941 | LINC00266-1-202 | ENST00000425473 | 629 nt | TSL 5 BASIC | 6 | □□□□□ -1.45 | | |
| MUC1 | P15941 | AL035691.1-201 | ENST00000434562 | 595 nt | TSL 3 BASIC | 6 | □□□□□ -1.45 | | |
| MUC1 | P15941 | OR52U1P-201 | ENST00000439752 | 923 nt | BASIC | 6 | □□□□□ -1.45 | | |
| MUC1 | P15941 | PMS2P9-201 | ENST00000441237 | 515 nt | BASIC | 6 | □□□□□ -1.45 | | |
| MUC1 | P15941 | PRDX1P1-201 | ENST00000449329 | 596 nt | BASIC | 6 | □□□□□ -1.45 | | |
| MUC1 | P15941 | AL929410.2-201 | ENST00000451170 | 189 nt | BASIC | 6 | □□□□□ -1.45 | | |
| MUC1 | P15941 | AC002075.1-201 | ENST00000457396 | 676 nt | BASIC | 6 | □□□□□ -1.45 | | |
| MUC1 | P15941 | PFN2-217 | ENST00000498307 | 556 nt | TSL 4 BASIC | 6 | □□□□□ -1.45 | | |
| MUC1 | P15941 | LINC01603-202 | ENST00000519557 | 712 nt | TSL 3 BASIC | 6 | □□□□□ -1.45 | | |
| MUC1 | P15941 | AC087664.2-202 | ENST00000521274 | 515 nt | TSL 3 BASIC | 6 | □□□□□ -1.45 | | |
| MUC1 | P15941 | COX6C-209 | ENST00000523016 | 745 nt | APPRIS P1 TSL 1 (best) BASIC | 6 | □□□□□ -1.45 | | |
| MUC1 | P15941 | AC011410.1-201 | ENST00000524175 | 705 nt | TSL 5 BASIC | 6 | □□□□□ -1.45 | | |
| MUC1 | P15941 | AP001994.1-201 | ENST00000527539 | 826 nt | BASIC | 6 | □□□□□ -1.45 | | |
| MUC1 | P15941 | OR4A1P-201 | ENST00000532342 | 920 nt | BASIC | 6 | □□□□□ -1.45 | | |
| MUC1 | P15941 | AC022075.2-201 | ENST00000535911 | 562 nt | TSL 4 BASIC | 6 | □□□□□ -1.45 | | |
| MUC1 | P15941 | AL157871.5-201 | ENST00000555212 | 533 nt | TSL 2 BASIC | 6 | □□□□□ -1.45 | | |
| MUC1 | P15941 | AC009303.2-206 | ENST00000588042 | 786 nt | TSL 5 BASIC | 6 | □□□□□ -1.45 | | |
| MUC1 | P15941 | ARHGAP32-203 | ENST00000524655 | 8194 nt | TSL 1 (best) BASIC | 6 | □□□□□ -1.45 | | |
| MUC1 | P15941 | CACNB4-245 | ENST00000637284 | 2423 nt | TSL 5 BASIC | 6 | □□□□□ -1.45 | | |
| MUC1 | P15941 | AL139384.2-201 | ENST00000613809 | 3590 nt | BASIC | 6 | □□□□□ -1.45 | | |
| MUC1 | P15941 | ANKRD17-203 | ENST00000509867 | 8105 nt | APPRIS ALT2 TSL 1 (best) BASIC | 6 | □□□□□ -1.45 | | |
| MUC1 | P15941 | HMMR-204 | ENST00000432118 | 2084 nt | APPRIS ALT2 TSL 2 BASIC | 6 | □□□□□ -1.45 | | |
| MUC1 | P15941 | ZNF337-202 | ENST00000376436 | 3613 nt | APPRIS P1 TSL 1 (best) BASIC | 6 | □□□□□ -1.45 | | |
| MUC1 | P15941 | AL358394.2-201 | ENST00000427229 | 3637 nt | TSL 1 (best) BASIC | 6 | □□□□□ -1.45 | | |
| MUC1 | P15941 | EXD1-202 | ENST00000458580 | 2177 nt | APPRIS ALT2 TSL 2 BASIC | 6 | □□□□□ -1.45 | | |
| MUC1 | P15941 | ABRAXAS2-201 | ENST00000298492 | 2992 nt | APPRIS P1 TSL 1 (best) BASIC | 6 | □□□□□ -1.45 | | |
| MUC1 | P15941 | CFAP57-208 | ENST00000610710 | 4162 nt | TSL 5 BASIC | 5.99 | □□□□□ -1.45 | | |
| MUC1 | P15941 | AC125232.1-201 | ENST00000452554 | 1408 nt | BASIC | 5.99 | □□□□□ -1.45 | | |
| MUC1 | P15941 | UGT2B27P-201 | ENST00000505092 | 1620 nt | BASIC | 5.99 | □□□□□ -1.45 | | |
| MUC1 | P15941 | AP000432.2-201 | ENST00000624164 | 2048 nt | BASIC | 5.99 | □□□□□ -1.45 | | |
| MUC1 | P15941 | MAT2B-201 | ENST00000280969 | 2226 nt | TSL 1 (best) BASIC | 5.99 | □□□□□ -1.45 | | |
| MUC1 | P15941 | PPP2R3A-201 | ENST00000264977 | 6795 nt | APPRIS P1 TSL 1 (best) BASIC | 5.99 | □□□□□ -1.45 | | |
| MUC1 | P15941 | ZNF112-201 | ENST00000337401 | 3321 nt | APPRIS ALT2 TSL 1 (best) BASIC | 5.99 | □□□□□ -1.45 | | |
| MUC1 | P15941 | DAZ3-202 | ENST00000382365 | 3503 nt | APPRIS P5 TSL 1 (best) BASIC | 5.99 | □□□□□ -1.45 | | |
| MUC1 | P15941 | CAPRIN2-203 | ENST00000417045 | 3535 nt | TSL 1 (best) BASIC | 5.99 | □□□□□ -1.45 | | |
| MUC1 | P15941 | SLMAP-202 | ENST00000295952 | 4420 nt | APPRIS P1 TSL 2 BASIC | 5.99 | □□□□□ -1.45 | | |
| MUC1 | P15941 | AC009812.3-201 | ENST00000523871 | 3766 nt | TSL 4 BASIC | 5.99 | □□□□□ -1.45 | | |
| MUC1 | P15941 | PCBP1-AS1-210 | ENST00000416395 | 2451 nt | TSL 2 BASIC | 5.99 | □□□□□ -1.45 | | |
| MUC1 | P15941 | LINC01504-201 | ENST00000436054 | 2078 nt | TSL 2 BASIC | 5.99 | □□□□□ -1.45 | | |
| MUC1 | P15941 | ANKRD31-201 | ENST00000274361 | 6036 nt | APPRIS P2 TSL 5 BASIC | 5.99 | □□□□□ -1.45 | | |
| MUC1 | P15941 | SCOC-204 | ENST00000394205 | 1964 nt | TSL 2 BASIC | 5.99 | □□□□□ -1.45 | | |
| MUC1 | P15941 | MED31-201 | ENST00000225728 | 1654 nt | APPRIS P1 TSL 1 (best) BASIC | 5.99 | □□□□□ -1.45 | | |