Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
DDX41Q9UJV9 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC22.9■■□□□ 1.26
DDX41Q9UJV9 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
DDX41Q9UJV9 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
DDX41Q9UJV9 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
DDX41Q9UJV9 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC22.9■■□□□ 1.26
DDX41Q9UJV9 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
DDX41Q9UJV9 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
DDX41Q9UJV9 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC22.9■■□□□ 1.26
DDX41Q9UJV9 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC22.9■■□□□ 1.26
DDX41Q9UJV9 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
DDX41Q9UJV9 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
DDX41Q9UJV9 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
DDX41Q9UJV9 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.26
DDX41Q9UJV9 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC22.89■■□□□ 1.26
DDX41Q9UJV9 STAC-204ENST00000457375 1366 ntTSL 2 BASIC22.89■■□□□ 1.26
DDX41Q9UJV9 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC22.89■■□□□ 1.26
DDX41Q9UJV9 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
DDX41Q9UJV9 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
DDX41Q9UJV9 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
DDX41Q9UJV9 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC22.89■■□□□ 1.26
DDX41Q9UJV9 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
DDX41Q9UJV9 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC22.89■■□□□ 1.25
DDX41Q9UJV9 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
DDX41Q9UJV9 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
DDX41Q9UJV9 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC22.89■■□□□ 1.25
DDX41Q9UJV9 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
DDX41Q9UJV9 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC22.89■■□□□ 1.25
DDX41Q9UJV9 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC22.89■■□□□ 1.25
DDX41Q9UJV9 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
DDX41Q9UJV9 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
DDX41Q9UJV9 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
DDX41Q9UJV9 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
DDX41Q9UJV9 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
DDX41Q9UJV9 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
DDX41Q9UJV9 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
DDX41Q9UJV9 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
DDX41Q9UJV9 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
DDX41Q9UJV9 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
DDX41Q9UJV9 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC22.88■■□□□ 1.25
DDX41Q9UJV9 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
DDX41Q9UJV9 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
DDX41Q9UJV9 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC22.88■■□□□ 1.25
DDX41Q9UJV9 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
DDX41Q9UJV9 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
DDX41Q9UJV9 THEM4-205ENST00000489410 643 ntTSL 2 BASIC22.88■■□□□ 1.25
DDX41Q9UJV9 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC22.88■■□□□ 1.25
DDX41Q9UJV9 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC22.88■■□□□ 1.25
DDX41Q9UJV9 MTDHP1-201ENST00000605323 784 ntBASIC22.88■■□□□ 1.25
DDX41Q9UJV9 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
DDX41Q9UJV9 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC22.88■■□□□ 1.25
DDX41Q9UJV9 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
DDX41Q9UJV9 STK25-205ENST00000405883 1904 ntTSL 2 BASIC22.88■■□□□ 1.25
DDX41Q9UJV9 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
DDX41Q9UJV9 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
DDX41Q9UJV9 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC22.88■■□□□ 1.25
DDX41Q9UJV9 AC087289.5-201ENST00000586076 3175 ntBASIC22.87■■□□□ 1.25
DDX41Q9UJV9 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC22.87■■□□□ 1.25
DDX41Q9UJV9 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC22.87■■□□□ 1.25
DDX41Q9UJV9 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
DDX41Q9UJV9 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
DDX41Q9UJV9 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
DDX41Q9UJV9 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC22.87■■□□□ 1.25
DDX41Q9UJV9 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC22.87■■□□□ 1.25
DDX41Q9UJV9 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC22.87■■□□□ 1.25
DDX41Q9UJV9 SPIB-206ENST00000596074 847 ntTSL 2 BASIC22.87■■□□□ 1.25
DDX41Q9UJV9 MIR2861-201ENST00000636310 90 ntBASIC22.87■■□□□ 1.25
DDX41Q9UJV9 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
DDX41Q9UJV9 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
DDX41Q9UJV9 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
DDX41Q9UJV9 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
DDX41Q9UJV9 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
DDX41Q9UJV9 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
DDX41Q9UJV9 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
DDX41Q9UJV9 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
DDX41Q9UJV9 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC22.87■■□□□ 1.25
DDX41Q9UJV9 FEM1AP1-201ENST00000431297 1995 ntBASIC22.87■■□□□ 1.25
DDX41Q9UJV9 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
DDX41Q9UJV9 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC22.87■■□□□ 1.25
DDX41Q9UJV9 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC22.86■■□□□ 1.25
DDX41Q9UJV9 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC22.86■■□□□ 1.25
DDX41Q9UJV9 AL049796.1-201ENST00000565336 1766 ntBASIC22.86■■□□□ 1.25
DDX41Q9UJV9 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
DDX41Q9UJV9 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC22.86■■□□□ 1.25
DDX41Q9UJV9 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
DDX41Q9UJV9 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
DDX41Q9UJV9 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC22.86■■□□□ 1.25
DDX41Q9UJV9 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
DDX41Q9UJV9 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
DDX41Q9UJV9 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC22.86■■□□□ 1.25
DDX41Q9UJV9 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
DDX41Q9UJV9 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC22.86■■□□□ 1.25
DDX41Q9UJV9 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC22.86■■□□□ 1.25
DDX41Q9UJV9 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
DDX41Q9UJV9 ISG20-202ENST00000379224 540 ntTSL 3 BASIC22.86■■□□□ 1.25
DDX41Q9UJV9 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC22.86■■□□□ 1.25
DDX41Q9UJV9 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
DDX41Q9UJV9 ABHD17AP6-201ENST00000458502 1044 ntBASIC22.86■■□□□ 1.25
DDX41Q9UJV9 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC22.86■■□□□ 1.25
DDX41Q9UJV9 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms