Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PARPBPQ9NWS1 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PARPBPQ9NWS1 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
PARPBPQ9NWS1 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.81■□□□□ 0.44
PARPBPQ9NWS1 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PARPBPQ9NWS1 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PARPBPQ9NWS1 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PARPBPQ9NWS1 KRT8P17-201ENST00000453110 1448 ntBASIC17.81■□□□□ 0.44
PARPBPQ9NWS1 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PARPBPQ9NWS1 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PARPBPQ9NWS1 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PARPBPQ9NWS1 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PARPBPQ9NWS1 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
PARPBPQ9NWS1 GABARAPL3-202ENST00000624044 1851 ntBASIC17.8■□□□□ 0.44
PARPBPQ9NWS1 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PARPBPQ9NWS1 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PARPBPQ9NWS1 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PARPBPQ9NWS1 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.8■□□□□ 0.44
PARPBPQ9NWS1 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.8■□□□□ 0.44
PARPBPQ9NWS1 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PARPBPQ9NWS1 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.8■□□□□ 0.44
PARPBPQ9NWS1 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.8■□□□□ 0.44
PARPBPQ9NWS1 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.8■□□□□ 0.44
PARPBPQ9NWS1 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PARPBPQ9NWS1 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PARPBPQ9NWS1 AL031963.3-201ENST00000606441 850 ntBASIC17.8■□□□□ 0.44
PARPBPQ9NWS1 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.8■□□□□ 0.44
PARPBPQ9NWS1 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PARPBPQ9NWS1 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PARPBPQ9NWS1 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.8■□□□□ 0.44
PARPBPQ9NWS1 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PARPBPQ9NWS1 AP005212.1-201ENST00000581547 1997 ntBASIC17.8■□□□□ 0.44
PARPBPQ9NWS1 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PARPBPQ9NWS1 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PARPBPQ9NWS1 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PARPBPQ9NWS1 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.8■□□□□ 0.44
PARPBPQ9NWS1 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.79■□□□□ 0.44
PARPBPQ9NWS1 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
PARPBPQ9NWS1 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PARPBPQ9NWS1 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PARPBPQ9NWS1 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PARPBPQ9NWS1 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PARPBPQ9NWS1 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PARPBPQ9NWS1 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PARPBPQ9NWS1 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.79■□□□□ 0.44
PARPBPQ9NWS1 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PARPBPQ9NWS1 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PARPBPQ9NWS1 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PARPBPQ9NWS1 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PARPBPQ9NWS1 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.79■□□□□ 0.44
PARPBPQ9NWS1 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.79■□□□□ 0.44
PARPBPQ9NWS1 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.79■□□□□ 0.44
PARPBPQ9NWS1 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PARPBPQ9NWS1 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.79■□□□□ 0.44
PARPBPQ9NWS1 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.79■□□□□ 0.44
PARPBPQ9NWS1 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PARPBPQ9NWS1 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.79■□□□□ 0.44
PARPBPQ9NWS1 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.79■□□□□ 0.44
PARPBPQ9NWS1 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
PARPBPQ9NWS1 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PARPBPQ9NWS1 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PARPBPQ9NWS1 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
PARPBPQ9NWS1 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PARPBPQ9NWS1 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PARPBPQ9NWS1 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PARPBPQ9NWS1 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PARPBPQ9NWS1 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PARPBPQ9NWS1 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PARPBPQ9NWS1 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PARPBPQ9NWS1 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.78■□□□□ 0.44
PARPBPQ9NWS1 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
PARPBPQ9NWS1 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.78■□□□□ 0.44
PARPBPQ9NWS1 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PARPBPQ9NWS1 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PARPBPQ9NWS1 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PARPBPQ9NWS1 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
PARPBPQ9NWS1 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.78■□□□□ 0.44
PARPBPQ9NWS1 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.78■□□□□ 0.44
PARPBPQ9NWS1 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
PARPBPQ9NWS1 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PARPBPQ9NWS1 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PARPBPQ9NWS1 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PARPBPQ9NWS1 AC073314.1-201ENST00000568729 2216 ntBASIC17.78■□□□□ 0.44
PARPBPQ9NWS1 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PARPBPQ9NWS1 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
PARPBPQ9NWS1 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PARPBPQ9NWS1 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PARPBPQ9NWS1 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PARPBPQ9NWS1 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
PARPBPQ9NWS1 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.77■□□□□ 0.44
PARPBPQ9NWS1 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PARPBPQ9NWS1 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
PARPBPQ9NWS1 PTBP1P-201ENST00000554374 1601 ntBASIC17.77■□□□□ 0.44
PARPBPQ9NWS1 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.77■□□□□ 0.44
PARPBPQ9NWS1 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.77■□□□□ 0.44
PARPBPQ9NWS1 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
PARPBPQ9NWS1 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.77■□□□□ 0.44
PARPBPQ9NWS1 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
PARPBPQ9NWS1 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PARPBPQ9NWS1 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms