Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.73■□□□□ 0.59
ZCCHC3Q9NUD5 AL050303.2-201ENST00000619798 666 ntBASIC18.73■□□□□ 0.59
ZCCHC3Q9NUD5 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
ZCCHC3Q9NUD5 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.73■□□□□ 0.59
ZCCHC3Q9NUD5 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZCCHC3Q9NUD5 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.73■□□□□ 0.59
ZCCHC3Q9NUD5 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZCCHC3Q9NUD5 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZCCHC3Q9NUD5 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.73■□□□□ 0.59
ZCCHC3Q9NUD5 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
ZCCHC3Q9NUD5 KRT8P20-201ENST00000423953 1409 ntBASIC18.73■□□□□ 0.59
ZCCHC3Q9NUD5 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
ZCCHC3Q9NUD5 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
ZCCHC3Q9NUD5 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ZCCHC3Q9NUD5 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
ZCCHC3Q9NUD5 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZCCHC3Q9NUD5 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.72■□□□□ 0.59
ZCCHC3Q9NUD5 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.72■□□□□ 0.59
ZCCHC3Q9NUD5 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.72■□□□□ 0.59
ZCCHC3Q9NUD5 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.72■□□□□ 0.59
ZCCHC3Q9NUD5 LSM12P1-201ENST00000411836 588 ntBASIC18.72■□□□□ 0.59
ZCCHC3Q9NUD5 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.72■□□□□ 0.59
ZCCHC3Q9NUD5 AF201337.1-201ENST00000520239 748 ntBASIC18.72■□□□□ 0.59
ZCCHC3Q9NUD5 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.72■□□□□ 0.59
ZCCHC3Q9NUD5 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.72■□□□□ 0.59
ZCCHC3Q9NUD5 C2orf69P4-201ENST00000565394 541 ntBASIC18.72■□□□□ 0.59
ZCCHC3Q9NUD5 AC105036.2-201ENST00000569468 176 ntBASIC18.72■□□□□ 0.59
ZCCHC3Q9NUD5 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZCCHC3Q9NUD5 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.72■□□□□ 0.59
ZCCHC3Q9NUD5 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.72■□□□□ 0.59
ZCCHC3Q9NUD5 MKRN4P-201ENST00000444706 1521 ntBASIC18.72■□□□□ 0.59
ZCCHC3Q9NUD5 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZCCHC3Q9NUD5 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZCCHC3Q9NUD5 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZCCHC3Q9NUD5 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZCCHC3Q9NUD5 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
ZCCHC3Q9NUD5 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZCCHC3Q9NUD5 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZCCHC3Q9NUD5 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.72■□□□□ 0.59
ZCCHC3Q9NUD5 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.72■□□□□ 0.59
ZCCHC3Q9NUD5 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
ZCCHC3Q9NUD5 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZCCHC3Q9NUD5 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.71■□□□□ 0.59
ZCCHC3Q9NUD5 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
ZCCHC3Q9NUD5 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZCCHC3Q9NUD5 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZCCHC3Q9NUD5 TMEM179-206ENST00000616017 1645 ntBASIC18.71■□□□□ 0.59
ZCCHC3Q9NUD5 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.71■□□□□ 0.59
ZCCHC3Q9NUD5 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZCCHC3Q9NUD5 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.71■□□□□ 0.59
ZCCHC3Q9NUD5 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.71■□□□□ 0.59
ZCCHC3Q9NUD5 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
ZCCHC3Q9NUD5 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZCCHC3Q9NUD5 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
ZCCHC3Q9NUD5 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.71■□□□□ 0.59
ZCCHC3Q9NUD5 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.71■□□□□ 0.59
ZCCHC3Q9NUD5 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.71■□□□□ 0.59
ZCCHC3Q9NUD5 KRT16P6-202ENST00000425692 1426 ntBASIC18.71■□□□□ 0.59
ZCCHC3Q9NUD5 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZCCHC3Q9NUD5 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ZCCHC3Q9NUD5 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZCCHC3Q9NUD5 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZCCHC3Q9NUD5 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZCCHC3Q9NUD5 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZCCHC3Q9NUD5 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.7■□□□□ 0.58
ZCCHC3Q9NUD5 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ZCCHC3Q9NUD5 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ZCCHC3Q9NUD5 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ZCCHC3Q9NUD5 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ZCCHC3Q9NUD5 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.7■□□□□ 0.58
ZCCHC3Q9NUD5 HLA-G-202ENST00000376815 851 ntBASIC18.7■□□□□ 0.58
ZCCHC3Q9NUD5 HLA-G-203ENST00000376818 1127 ntBASIC18.7■□□□□ 0.58
ZCCHC3Q9NUD5 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.7■□□□□ 0.58
ZCCHC3Q9NUD5 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZCCHC3Q9NUD5 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.7■□□□□ 0.58
ZCCHC3Q9NUD5 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.7■□□□□ 0.58
ZCCHC3Q9NUD5 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ZCCHC3Q9NUD5 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZCCHC3Q9NUD5 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ZCCHC3Q9NUD5 RAP2CP1-201ENST00000605103 478 ntBASIC18.7■□□□□ 0.58
ZCCHC3Q9NUD5 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.7■□□□□ 0.58
ZCCHC3Q9NUD5 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
ZCCHC3Q9NUD5 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZCCHC3Q9NUD5 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZCCHC3Q9NUD5 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.7■□□□□ 0.58
ZCCHC3Q9NUD5 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZCCHC3Q9NUD5 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
ZCCHC3Q9NUD5 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.7■□□□□ 0.58
ZCCHC3Q9NUD5 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
ZCCHC3Q9NUD5 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZCCHC3Q9NUD5 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZCCHC3Q9NUD5 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZCCHC3Q9NUD5 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZCCHC3Q9NUD5 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ZCCHC3Q9NUD5 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZCCHC3Q9NUD5 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZCCHC3Q9NUD5 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.69■□□□□ 0.58
ZCCHC3Q9NUD5 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ZCCHC3Q9NUD5 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZCCHC3Q9NUD5 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms