Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 POM121L13P-201ENST00000422362 380 ntBASIC20.57■□□□□ 0.88
VPS45Q9NRW7 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.57■□□□□ 0.88
VPS45Q9NRW7 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
VPS45Q9NRW7 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
VPS45Q9NRW7 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.57■□□□□ 0.88
VPS45Q9NRW7 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VPS45Q9NRW7 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.57■□□□□ 0.88
VPS45Q9NRW7 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.57■□□□□ 0.88
VPS45Q9NRW7 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.57■□□□□ 0.88
VPS45Q9NRW7 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VPS45Q9NRW7 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VPS45Q9NRW7 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.57■□□□□ 0.88
VPS45Q9NRW7 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
VPS45Q9NRW7 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
VPS45Q9NRW7 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.56■□□□□ 0.88
VPS45Q9NRW7 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
VPS45Q9NRW7 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
VPS45Q9NRW7 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.56■□□□□ 0.88
VPS45Q9NRW7 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VPS45Q9NRW7 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VPS45Q9NRW7 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
VPS45Q9NRW7 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VPS45Q9NRW7 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VPS45Q9NRW7 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VPS45Q9NRW7 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
VPS45Q9NRW7 KRT18P68-201ENST00000392293 1000 ntBASIC20.56■□□□□ 0.88
VPS45Q9NRW7 RPS2P55-201ENST00000397318 883 ntBASIC20.56■□□□□ 0.88
VPS45Q9NRW7 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.56■□□□□ 0.88
VPS45Q9NRW7 AC107956.1-201ENST00000494359 873 ntBASIC20.56■□□□□ 0.88
VPS45Q9NRW7 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.56■□□□□ 0.88
VPS45Q9NRW7 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.56■□□□□ 0.88
VPS45Q9NRW7 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
VPS45Q9NRW7 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
VPS45Q9NRW7 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
VPS45Q9NRW7 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VPS45Q9NRW7 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
VPS45Q9NRW7 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VPS45Q9NRW7 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VPS45Q9NRW7 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
VPS45Q9NRW7 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
VPS45Q9NRW7 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
VPS45Q9NRW7 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
VPS45Q9NRW7 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VPS45Q9NRW7 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
VPS45Q9NRW7 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
VPS45Q9NRW7 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
VPS45Q9NRW7 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
VPS45Q9NRW7 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VPS45Q9NRW7 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
VPS45Q9NRW7 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.55■□□□□ 0.88
VPS45Q9NRW7 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.55■□□□□ 0.88
VPS45Q9NRW7 AP001412.1-201ENST00000608405 714 ntBASIC20.55■□□□□ 0.88
VPS45Q9NRW7 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
VPS45Q9NRW7 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.55■□□□□ 0.88
VPS45Q9NRW7 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VPS45Q9NRW7 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
VPS45Q9NRW7 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
VPS45Q9NRW7 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
VPS45Q9NRW7 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.54■□□□□ 0.88
VPS45Q9NRW7 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.54■□□□□ 0.88
VPS45Q9NRW7 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
VPS45Q9NRW7 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
VPS45Q9NRW7 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.54■□□□□ 0.88
VPS45Q9NRW7 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VPS45Q9NRW7 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VPS45Q9NRW7 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.54■□□□□ 0.88
VPS45Q9NRW7 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VPS45Q9NRW7 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.54■□□□□ 0.88
VPS45Q9NRW7 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VPS45Q9NRW7 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.54■□□□□ 0.88
VPS45Q9NRW7 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
VPS45Q9NRW7 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
VPS45Q9NRW7 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.54■□□□□ 0.88
VPS45Q9NRW7 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.54■□□□□ 0.88
VPS45Q9NRW7 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
VPS45Q9NRW7 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.54■□□□□ 0.88
VPS45Q9NRW7 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.54■□□□□ 0.88
VPS45Q9NRW7 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VPS45Q9NRW7 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.54■□□□□ 0.88
VPS45Q9NRW7 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VPS45Q9NRW7 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VPS45Q9NRW7 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.54■□□□□ 0.88
VPS45Q9NRW7 AL162377.1-201ENST00000618844 1793 ntBASIC20.54■□□□□ 0.88
VPS45Q9NRW7 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VPS45Q9NRW7 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
VPS45Q9NRW7 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.54■□□□□ 0.88
VPS45Q9NRW7 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VPS45Q9NRW7 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.53■□□□□ 0.88
VPS45Q9NRW7 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.53■□□□□ 0.88
VPS45Q9NRW7 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VPS45Q9NRW7 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VPS45Q9NRW7 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.53■□□□□ 0.88
VPS45Q9NRW7 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.53■□□□□ 0.88
VPS45Q9NRW7 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.53■□□□□ 0.88
VPS45Q9NRW7 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VPS45Q9NRW7 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VPS45Q9NRW7 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.53■□□□□ 0.88
VPS45Q9NRW7 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
VPS45Q9NRW7 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
VPS45Q9NRW7 AC105020.6-201ENST00000621523 1217 ntBASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms