Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
DDX4Q9NQI0 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.65■■□□□ 1.38
DDX4Q9NQI0 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC23.64■■□□□ 1.38
DDX4Q9NQI0 AC079598.2-202ENST00000546624 1451 ntBASIC23.64■■□□□ 1.38
DDX4Q9NQI0 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
DDX4Q9NQI0 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC23.64■■□□□ 1.37
DDX4Q9NQI0 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
DDX4Q9NQI0 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC23.64■■□□□ 1.37
DDX4Q9NQI0 AP002982.1-201ENST00000492365 877 ntBASIC23.64■■□□□ 1.37
DDX4Q9NQI0 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
DDX4Q9NQI0 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC23.64■■□□□ 1.37
DDX4Q9NQI0 NUDT16P1-203ENST00000513809 620 ntBASIC23.64■■□□□ 1.37
DDX4Q9NQI0 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC23.64■■□□□ 1.37
DDX4Q9NQI0 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
DDX4Q9NQI0 REXO1L10P-201ENST00000615707 1290 ntBASIC23.64■■□□□ 1.37
DDX4Q9NQI0 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
DDX4Q9NQI0 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
DDX4Q9NQI0 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
DDX4Q9NQI0 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC23.64■■□□□ 1.37
DDX4Q9NQI0 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
DDX4Q9NQI0 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
DDX4Q9NQI0 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
DDX4Q9NQI0 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC23.63■■□□□ 1.37
DDX4Q9NQI0 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC23.63■■□□□ 1.37
DDX4Q9NQI0 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
DDX4Q9NQI0 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
DDX4Q9NQI0 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC23.63■■□□□ 1.37
DDX4Q9NQI0 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
DDX4Q9NQI0 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC23.63■■□□□ 1.37
DDX4Q9NQI0 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC23.63■■□□□ 1.37
DDX4Q9NQI0 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
DDX4Q9NQI0 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.63■■□□□ 1.37
DDX4Q9NQI0 RBM17P1-201ENST00000453646 1190 ntBASIC23.63■■□□□ 1.37
DDX4Q9NQI0 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC23.63■■□□□ 1.37
DDX4Q9NQI0 KRT8P9-201ENST00000558927 1449 ntBASIC23.63■■□□□ 1.37
DDX4Q9NQI0 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
DDX4Q9NQI0 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC23.63■■□□□ 1.37
DDX4Q9NQI0 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
DDX4Q9NQI0 AC092720.2-201ENST00000602388 1665 ntBASIC23.63■■□□□ 1.37
DDX4Q9NQI0 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
DDX4Q9NQI0 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
DDX4Q9NQI0 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC23.63■■□□□ 1.37
DDX4Q9NQI0 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC23.63■■□□□ 1.37
DDX4Q9NQI0 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
DDX4Q9NQI0 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.62■■□□□ 1.37
DDX4Q9NQI0 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
DDX4Q9NQI0 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC23.62■■□□□ 1.37
DDX4Q9NQI0 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
DDX4Q9NQI0 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC23.62■■□□□ 1.37
DDX4Q9NQI0 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
DDX4Q9NQI0 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC23.62■■□□□ 1.37
DDX4Q9NQI0 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC23.62■■□□□ 1.37
DDX4Q9NQI0 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
DDX4Q9NQI0 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC23.62■■□□□ 1.37
DDX4Q9NQI0 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
DDX4Q9NQI0 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
DDX4Q9NQI0 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
DDX4Q9NQI0 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
DDX4Q9NQI0 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
DDX4Q9NQI0 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
DDX4Q9NQI0 RCN1P1-201ENST00000400413 996 ntBASIC23.61■■□□□ 1.37
DDX4Q9NQI0 MIR1224-201ENST00000408193 85 ntBASIC23.61■■□□□ 1.37
DDX4Q9NQI0 NIFKP9-201ENST00000419265 221 ntBASIC23.61■■□□□ 1.37
DDX4Q9NQI0 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
DDX4Q9NQI0 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
DDX4Q9NQI0 AC116351.2-201ENST00000606540 1585 ntBASIC23.61■■□□□ 1.37
DDX4Q9NQI0 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC23.6■■□□□ 1.37
DDX4Q9NQI0 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
DDX4Q9NQI0 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
DDX4Q9NQI0 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC23.6■■□□□ 1.37
DDX4Q9NQI0 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC23.6■■□□□ 1.37
DDX4Q9NQI0 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC23.6■■□□□ 1.37
DDX4Q9NQI0 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
DDX4Q9NQI0 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC23.6■■□□□ 1.37
DDX4Q9NQI0 MMP23A-201ENST00000234610 1017 ntBASIC23.6■■□□□ 1.37
DDX4Q9NQI0 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
DDX4Q9NQI0 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC23.6■■□□□ 1.37
DDX4Q9NQI0 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
DDX4Q9NQI0 CR392000.1-201ENST00000624770 1228 ntBASIC23.6■■□□□ 1.37
DDX4Q9NQI0 DECR2-212ENST00000627716 352 ntTSL 2 BASIC23.6■■□□□ 1.37
DDX4Q9NQI0 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
DDX4Q9NQI0 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
DDX4Q9NQI0 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC23.6■■□□□ 1.37
DDX4Q9NQI0 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC23.6■■□□□ 1.37
DDX4Q9NQI0 TFP1-202ENST00000475455 1573 ntBASIC23.6■■□□□ 1.37
DDX4Q9NQI0 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC23.6■■□□□ 1.37
DDX4Q9NQI0 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
DDX4Q9NQI0 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
DDX4Q9NQI0 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC23.6■■□□□ 1.37
DDX4Q9NQI0 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
DDX4Q9NQI0 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
DDX4Q9NQI0 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
DDX4Q9NQI0 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
DDX4Q9NQI0 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
DDX4Q9NQI0 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC23.59■■□□□ 1.37
DDX4Q9NQI0 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
DDX4Q9NQI0 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC23.59■■□□□ 1.37
DDX4Q9NQI0 AP000525.1-201ENST00000608286 694 ntBASIC23.59■■□□□ 1.37
DDX4Q9NQI0 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC23.59■■□□□ 1.37
DDX4Q9NQI0 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms