Protein–RNA interactions for Protein: Q9H4I3

TRABD, TraB domain-containing protein, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABDQ9H4I3 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.48■□□□□ 0.87
TRABDQ9H4I3 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRABDQ9H4I3 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRABDQ9H4I3 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRABDQ9H4I3 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
TRABDQ9H4I3 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
TRABDQ9H4I3 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.47■□□□□ 0.87
TRABDQ9H4I3 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRABDQ9H4I3 BX323043.1-201ENST00000641006 1765 ntBASIC20.47■□□□□ 0.87
TRABDQ9H4I3 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
TRABDQ9H4I3 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRABDQ9H4I3 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRABDQ9H4I3 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRABDQ9H4I3 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
TRABDQ9H4I3 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRABDQ9H4I3 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.47■□□□□ 0.87
TRABDQ9H4I3 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRABDQ9H4I3 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
TRABDQ9H4I3 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.47■□□□□ 0.87
TRABDQ9H4I3 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRABDQ9H4I3 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.46■□□□□ 0.87
TRABDQ9H4I3 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRABDQ9H4I3 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.46■□□□□ 0.87
TRABDQ9H4I3 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRABDQ9H4I3 AC010980.2-201ENST00000587099 1412 ntBASIC20.46■□□□□ 0.87
TRABDQ9H4I3 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
TRABDQ9H4I3 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.46■□□□□ 0.87
TRABDQ9H4I3 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRABDQ9H4I3 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRABDQ9H4I3 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.46■□□□□ 0.87
TRABDQ9H4I3 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRABDQ9H4I3 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRABDQ9H4I3 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRABDQ9H4I3 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRABDQ9H4I3 AF201337.1-201ENST00000520239 748 ntBASIC20.46■□□□□ 0.87
TRABDQ9H4I3 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.46■□□□□ 0.87
TRABDQ9H4I3 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
TRABDQ9H4I3 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.46■□□□□ 0.87
TRABDQ9H4I3 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRABDQ9H4I3 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
TRABDQ9H4I3 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRABDQ9H4I3 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
TRABDQ9H4I3 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRABDQ9H4I3 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.46■□□□□ 0.87
TRABDQ9H4I3 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.87
TRABDQ9H4I3 AC098818.2-201ENST00000564925 2320 ntBASIC20.45■□□□□ 0.87
TRABDQ9H4I3 KRT8P36-201ENST00000489121 1440 ntBASIC20.45■□□□□ 0.86
TRABDQ9H4I3 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRABDQ9H4I3 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
TRABDQ9H4I3 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRABDQ9H4I3 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.45■□□□□ 0.86
TRABDQ9H4I3 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.45■□□□□ 0.86
TRABDQ9H4I3 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRABDQ9H4I3 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRABDQ9H4I3 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.45■□□□□ 0.86
TRABDQ9H4I3 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.45■□□□□ 0.86
TRABDQ9H4I3 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.45■□□□□ 0.86
TRABDQ9H4I3 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
TRABDQ9H4I3 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.45■□□□□ 0.86
TRABDQ9H4I3 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRABDQ9H4I3 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRABDQ9H4I3 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.45■□□□□ 0.86
TRABDQ9H4I3 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
TRABDQ9H4I3 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.45■□□□□ 0.86
TRABDQ9H4I3 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
TRABDQ9H4I3 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRABDQ9H4I3 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.45■□□□□ 0.86
TRABDQ9H4I3 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.44■□□□□ 0.86
TRABDQ9H4I3 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRABDQ9H4I3 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.44■□□□□ 0.86
TRABDQ9H4I3 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.44■□□□□ 0.86
TRABDQ9H4I3 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
TRABDQ9H4I3 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
TRABDQ9H4I3 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRABDQ9H4I3 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
TRABDQ9H4I3 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.44■□□□□ 0.86
TRABDQ9H4I3 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRABDQ9H4I3 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.44■□□□□ 0.86
TRABDQ9H4I3 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRABDQ9H4I3 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.44■□□□□ 0.86
TRABDQ9H4I3 AC105036.2-201ENST00000569468 176 ntBASIC20.44■□□□□ 0.86
TRABDQ9H4I3 CYP2T3P-201ENST00000601990 817 ntBASIC20.44■□□□□ 0.86
TRABDQ9H4I3 AL121832.2-201ENST00000610979 668 ntBASIC20.44■□□□□ 0.86
TRABDQ9H4I3 AL356652.1-201ENST00000615962 565 ntBASIC20.44■□□□□ 0.86
TRABDQ9H4I3 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRABDQ9H4I3 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRABDQ9H4I3 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRABDQ9H4I3 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRABDQ9H4I3 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRABDQ9H4I3 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRABDQ9H4I3 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRABDQ9H4I3 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRABDQ9H4I3 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.43■□□□□ 0.86
TRABDQ9H4I3 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
TRABDQ9H4I3 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRABDQ9H4I3 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRABDQ9H4I3 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRABDQ9H4I3 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRABDQ9H4I3 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRABDQ9H4I3 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms