Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRAF4Q9BUZ4 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.77■□□□□ 0.44
TRAF4Q9BUZ4 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.77■□□□□ 0.44
TRAF4Q9BUZ4 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRAF4Q9BUZ4 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.77■□□□□ 0.44
TRAF4Q9BUZ4 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.77■□□□□ 0.44
TRAF4Q9BUZ4 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAF4Q9BUZ4 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAF4Q9BUZ4 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
TRAF4Q9BUZ4 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
TRAF4Q9BUZ4 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRAF4Q9BUZ4 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TRAF4Q9BUZ4 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.76■□□□□ 0.43
TRAF4Q9BUZ4 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRAF4Q9BUZ4 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAF4Q9BUZ4 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
TRAF4Q9BUZ4 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TRAF4Q9BUZ4 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAF4Q9BUZ4 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRAF4Q9BUZ4 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAF4Q9BUZ4 LSM12P1-201ENST00000411836 588 ntBASIC17.76■□□□□ 0.43
TRAF4Q9BUZ4 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.76■□□□□ 0.43
TRAF4Q9BUZ4 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.76■□□□□ 0.43
TRAF4Q9BUZ4 CDV3P1-201ENST00000471403 739 ntBASIC17.76■□□□□ 0.43
TRAF4Q9BUZ4 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
TRAF4Q9BUZ4 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAF4Q9BUZ4 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAF4Q9BUZ4 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRAF4Q9BUZ4 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
TRAF4Q9BUZ4 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAF4Q9BUZ4 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TRAF4Q9BUZ4 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAF4Q9BUZ4 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
TRAF4Q9BUZ4 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
TRAF4Q9BUZ4 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAF4Q9BUZ4 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.75■□□□□ 0.43
TRAF4Q9BUZ4 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TRAF4Q9BUZ4 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.75■□□□□ 0.43
TRAF4Q9BUZ4 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAF4Q9BUZ4 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
TRAF4Q9BUZ4 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.75■□□□□ 0.43
TRAF4Q9BUZ4 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.75■□□□□ 0.43
TRAF4Q9BUZ4 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.75■□□□□ 0.43
TRAF4Q9BUZ4 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.75■□□□□ 0.43
TRAF4Q9BUZ4 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
TRAF4Q9BUZ4 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRAF4Q9BUZ4 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.75■□□□□ 0.43
TRAF4Q9BUZ4 AC008687.6-201ENST00000596318 630 ntBASIC17.75■□□□□ 0.43
TRAF4Q9BUZ4 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.75■□□□□ 0.43
TRAF4Q9BUZ4 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAF4Q9BUZ4 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAF4Q9BUZ4 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAF4Q9BUZ4 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TRAF4Q9BUZ4 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAF4Q9BUZ4 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAF4Q9BUZ4 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAF4Q9BUZ4 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.75■□□□□ 0.43
TRAF4Q9BUZ4 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.75■□□□□ 0.43
TRAF4Q9BUZ4 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAF4Q9BUZ4 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAF4Q9BUZ4 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAF4Q9BUZ4 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.74■□□□□ 0.43
TRAF4Q9BUZ4 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAF4Q9BUZ4 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
TRAF4Q9BUZ4 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAF4Q9BUZ4 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
TRAF4Q9BUZ4 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAF4Q9BUZ4 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TRAF4Q9BUZ4 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAF4Q9BUZ4 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.74■□□□□ 0.43
TRAF4Q9BUZ4 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.74■□□□□ 0.43
TRAF4Q9BUZ4 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAF4Q9BUZ4 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
TRAF4Q9BUZ4 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.74■□□□□ 0.43
TRAF4Q9BUZ4 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
TRAF4Q9BUZ4 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAF4Q9BUZ4 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAF4Q9BUZ4 AC020907.5-201ENST00000624372 1936 ntBASIC17.74■□□□□ 0.43
TRAF4Q9BUZ4 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAF4Q9BUZ4 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.74■□□□□ 0.43
TRAF4Q9BUZ4 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.73■□□□□ 0.43
TRAF4Q9BUZ4 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAF4Q9BUZ4 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRAF4Q9BUZ4 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.73■□□□□ 0.43
TRAF4Q9BUZ4 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
TRAF4Q9BUZ4 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
TRAF4Q9BUZ4 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAF4Q9BUZ4 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAF4Q9BUZ4 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAF4Q9BUZ4 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRAF4Q9BUZ4 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAF4Q9BUZ4 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAF4Q9BUZ4 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRAF4Q9BUZ4 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.73■□□□□ 0.43
TRAF4Q9BUZ4 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.73■□□□□ 0.43
TRAF4Q9BUZ4 DYM-203ENST00000442713 2147 ntTSL 2 BASIC17.73■□□□□ 0.43
TRAF4Q9BUZ4 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.73■□□□□ 0.43
TRAF4Q9BUZ4 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.73■□□□□ 0.43
TRAF4Q9BUZ4 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.73■□□□□ 0.43
TRAF4Q9BUZ4 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms