Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.96■□□□□ 0.79
NDNQ99608 AC069236.1-201ENST00000604339 616 ntBASIC19.96■□□□□ 0.79
NDNQ99608 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
NDNQ99608 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NDNQ99608 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
NDNQ99608 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NDNQ99608 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
NDNQ99608 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NDNQ99608 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NDNQ99608 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NDNQ99608 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NDNQ99608 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NDNQ99608 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.95■□□□□ 0.78
NDNQ99608 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
NDNQ99608 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.95■□□□□ 0.78
NDNQ99608 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.95■□□□□ 0.78
NDNQ99608 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.95■□□□□ 0.78
NDNQ99608 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.95■□□□□ 0.78
NDNQ99608 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
NDNQ99608 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NDNQ99608 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.95■□□□□ 0.78
NDNQ99608 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
NDNQ99608 AC100791.3-201ENST00000617619 330 ntBASIC19.95■□□□□ 0.78
NDNQ99608 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.95■□□□□ 0.78
NDNQ99608 AC105020.6-201ENST00000621523 1217 ntBASIC19.95■□□□□ 0.78
NDNQ99608 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.95■□□□□ 0.78
NDNQ99608 AC008694.1-202ENST00000636953 945 ntBASIC19.95■□□□□ 0.78
NDNQ99608 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
NDNQ99608 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NDNQ99608 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NDNQ99608 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NDNQ99608 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NDNQ99608 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NDNQ99608 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.95■□□□□ 0.78
NDNQ99608 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NDNQ99608 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NDNQ99608 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NDNQ99608 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NDNQ99608 AC125437.2-201ENST00000625180 2167 ntBASIC19.94■□□□□ 0.78
NDNQ99608 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
NDNQ99608 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NDNQ99608 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NDNQ99608 KRT18P68-201ENST00000392293 1000 ntBASIC19.94■□□□□ 0.78
NDNQ99608 CYP2T3P-201ENST00000601990 817 ntBASIC19.94■□□□□ 0.78
NDNQ99608 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.94■□□□□ 0.78
NDNQ99608 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
NDNQ99608 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NDNQ99608 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NDNQ99608 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NDNQ99608 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NDNQ99608 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.94■□□□□ 0.78
NDNQ99608 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
NDNQ99608 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NDNQ99608 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.93■□□□□ 0.78
NDNQ99608 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
NDNQ99608 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NDNQ99608 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NDNQ99608 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
NDNQ99608 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NDNQ99608 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.93■□□□□ 0.78
NDNQ99608 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NDNQ99608 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
NDNQ99608 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.93■□□□□ 0.78
NDNQ99608 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.93■□□□□ 0.78
NDNQ99608 AC093787.1-201ENST00000450396 207 ntBASIC19.93■□□□□ 0.78
NDNQ99608 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
NDNQ99608 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
NDNQ99608 PTBP1P-201ENST00000554374 1601 ntBASIC19.93■□□□□ 0.78
NDNQ99608 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
NDNQ99608 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
NDNQ99608 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.93■□□□□ 0.78
NDNQ99608 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
NDNQ99608 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.93■□□□□ 0.78
NDNQ99608 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.93■□□□□ 0.78
NDNQ99608 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NDNQ99608 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NDNQ99608 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.93■□□□□ 0.78
NDNQ99608 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NDNQ99608 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.93■□□□□ 0.78
NDNQ99608 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NDNQ99608 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.92■□□□□ 0.78
NDNQ99608 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NDNQ99608 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
NDNQ99608 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.92■□□□□ 0.78
NDNQ99608 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
NDNQ99608 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NDNQ99608 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.92■□□□□ 0.78
NDNQ99608 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
NDNQ99608 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NDNQ99608 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.92■□□□□ 0.78
NDNQ99608 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
NDNQ99608 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NDNQ99608 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NDNQ99608 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NDNQ99608 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
NDNQ99608 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
NDNQ99608 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NDNQ99608 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
NDNQ99608 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.92■□□□□ 0.78
NDNQ99608 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms